Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is yjeS [H]
Identifier: 220918131
GI number: 220918131
Start: 3356404
End: 3357441
Strand: Reverse
Name: yjeS [H]
Synonym: A2cp1_3034
Alternate gene names: 220918131
Gene position: 3357441-3356404 (Counterclockwise)
Preceding gene: 220918132
Following gene: 220918130
Centisome position: 66.76
GC content: 78.52
Gene sequence:
>1038_bases GTGGCGGGGCTCGACGCCGACCGGGTGAAGGCGGCCGCGGCGCGGGCCGGCTTCTCGAGGTGCGGGATCGCCCGGGCCGA GCCGCTCGACCCGGGCCCGCTCGATCGCGTGCTGGCGGGCGGCCTCGAGGCCGACATGGTGTGGCTGCGCACGCAGCGGG ACGAGCGGCTCGACCCGGCGCGGCTCCTGCCAGGCGTCCGGAGCGTGGTGGCCCTCGCGCTCTCGTACCACGCCGGCGAG CCGGCGGCGCCGCCGCCCGGCGCGGCCGCGGTGGCGCGGTACGCGCGCGGCCGCGACTACCACACCGTGGTGAAGCGCAA GCTCGCCGCCCTGCTCGCGGACCTGCGCGAGGCCGATCCGGGGCTGGGCGCGTACGCCTCGTGCGACATCGCGCCGGTGA TGGAGAAGGCGTGGGCGGAGCGGGCCGGCGTGGGCTGGGTGGGGAAGAACGGCTGCCTCATCACGCCGGAGCACGGGAGC TGGGTGGTGCTCGCGACGCTGCTGCTCGACCGCGAGCTCGCGCCCGACGCGCCGCACCCGGACCGCTGCGGCACCTGCGA GGCGTGCCTGCCGGCGTGCCCCACCGGCGCCATCCCGGCGCCCGGCGTGGTGGACGCGCGCCGCTGCATCTCGTTCTGGA CCATCGAGCGGCGTGGGCCCATCCCCGACGAGCTGGCGGGGAGGCTGGGCGGGTGGGCGTTCGGCTGCGACGACTGCCAG ACGGTGTGCCCCTGGAACCGCGGCGTGCCCGCCGAGGCCGACCTCGAGCTCGTGCCGCGCCCGGGCCAGCTCGCGCTGTG GCTCGACGAGCTGCTCGCGCTCGACGCCGAGGGCTACCGGCGGCGCTTCCACGGCACCTCGCTGGCGCGGGCGCGGCACG ACGGCCTGGTCCGGAACGCGCTGCTCCTCGCCGGCACCTCGGGCGACCGGCGGTACCTGCCGGCGATCCGCGCGCACCTC GAGAGCCCGCTCGGCGACGCCGTCCGCGCCGCGGCGCGCTGGGCGCTGGAGCGGCTGGGCGAGGCGCGCGATCCCTGA
Upstream 100 bases:
>100_bases GGCGCCGCGGCGGGAGGCCTCTCCGCGGCCATCGCGAAGCGGCTCGTGCCGGCGCCGCCCGAGGTCGCGGCGCGCGCCGG GCGGCGCGGCTGAGGGGCGC
Downstream 100 bases:
>100_bases GGCACGTCGGGGCGCCGGCTTGCGCCCGGCGCACCGACCGCTACATTCCCGCGCCGCATGGTCCACCTGGTGATGTTCCT GCACTCGGCCATCTCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MAGLDADRVKAAAARAGFSRCGIARAEPLDPGPLDRVLAGGLEADMVWLRTQRDERLDPARLLPGVRSVVALALSYHAGE PAAPPPGAAAVARYARGRDYHTVVKRKLAALLADLREADPGLGAYASCDIAPVMEKAWAERAGVGWVGKNGCLITPEHGS WVVLATLLLDRELAPDAPHPDRCGTCEACLPACPTGAIPAPGVVDARRCISFWTIERRGPIPDELAGRLGGWAFGCDDCQ TVCPWNRGVPAEADLELVPRPGQLALWLDELLALDAEGYRRRFHGTSLARARHDGLVRNALLLAGTSGDRRYLPAIRAHL ESPLGDAVRAAARWALERLGEARDP
Sequences:
>Translated_345_residues MAGLDADRVKAAAARAGFSRCGIARAEPLDPGPLDRVLAGGLEADMVWLRTQRDERLDPARLLPGVRSVVALALSYHAGE PAAPPPGAAAVARYARGRDYHTVVKRKLAALLADLREADPGLGAYASCDIAPVMEKAWAERAGVGWVGKNGCLITPEHGS WVVLATLLLDRELAPDAPHPDRCGTCEACLPACPTGAIPAPGVVDARRCISFWTIERRGPIPDELAGRLGGWAFGCDDCQ TVCPWNRGVPAEADLELVPRPGQLALWLDELLALDAEGYRRRFHGTSLARARHDGLVRNALLLAGTSGDRRYLPAIRAHL ESPLGDAVRAAARWALERLGEARDP >Mature_344_residues AGLDADRVKAAAARAGFSRCGIARAEPLDPGPLDRVLAGGLEADMVWLRTQRDERLDPARLLPGVRSVVALALSYHAGEP AAPPPGAAAVARYARGRDYHTVVKRKLAALLADLREADPGLGAYASCDIAPVMEKAWAERAGVGWVGKNGCLITPEHGSW VVLATLLLDRELAPDAPHPDRCGTCEACLPACPTGAIPAPGVVDARRCISFWTIERRGPIPDELAGRLGGWAFGCDDCQT VCPWNRGVPAEADLELVPRPGQLALWLDELLALDAEGYRRRFHGTSLARARHDGLVRNALLLAGTSGDRRYLPAIRAHLE SPLGDAVRAAARWALERLGEARDP
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=346, Percent_Identity=35.2601156069364, Blast_Score=191, Evalue=6e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 36884; Mature: 36752
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLDADRVKAAAARAGFSRCGIARAEPLDPGPLDRVLAGGLEADMVWLRTQRDERLDPA CCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCHHHHHHHCCCCHHEEEEECCCCCCCCHH RLLPGVRSVVALALSYHAGEPAAPPPGAAAVARYARGRDYHTVVKRKLAALLADLREADP HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC GLGAYASCDIAPVMEKAWAERAGVGWVGKNGCLITPEHGSWVVLATLLLDRELAPDAPHP CCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCC DRCGTCEACLPACPTGAIPAPGVVDARRCISFWTIERRGPIPDELAGRLGGWAFGCDDCQ CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHCCCEECCCCCC TVCPWNRGVPAEADLELVPRPGQLALWLDELLALDAEGYRRRFHGTSLARARHDGLVRNA CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHE LLLAGTSGDRRYLPAIRAHLESPLGDAVRAAARWALERLGEARDP EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGLDADRVKAAAARAGFSRCGIARAEPLDPGPLDRVLAGGLEADMVWLRTQRDERLDPA CCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCHHHHHHHCCCCHHEEEEECCCCCCCCHH RLLPGVRSVVALALSYHAGEPAAPPPGAAAVARYARGRDYHTVVKRKLAALLADLREADP HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC GLGAYASCDIAPVMEKAWAERAGVGWVGKNGCLITPEHGSWVVLATLLLDRELAPDAPHP CCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCC DRCGTCEACLPACPTGAIPAPGVVDARRCISFWTIERRGPIPDELAGRLGGWAFGCDDCQ CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHCCCEECCCCCC TVCPWNRGVPAEADLELVPRPGQLALWLDELLALDAEGYRRRFHGTSLARARHDGLVRNA CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHE LLLAGTSGDRRYLPAIRAHLESPLGDAVRAAARWALERLGEARDP EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]