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The map label for this gene is ydeD [C]

Identifier: 220918130

GI number: 220918130

Start: 3355486

End: 3356346

Strand: Reverse

Name: ydeD [C]

Synonym: A2cp1_3033

Alternate gene names: 220918130

Gene position: 3356346-3355486 (Counterclockwise)

Preceding gene: 220918131

Following gene: 220918129

Centisome position: 66.74

GC content: 74.45

Gene sequence:

>861_bases
ATGGTCCACCTGGTGATGTTCCTGCACTCGGCCATCTCGGCCGGCACCTACCTCGCCGCGAAGCGCGCGCTGGGGGAGCT
GTCGCCGTTCGAGGTGGCGCTGGTGCGCTTCGGCCTGTCGTCGCTCGCGTTCGGGCTGCTGCTGTGGCGCCGGCCGGTGC
GGGTGGCGCGGCGCGATCTCCTCGCGCTGCTGGGGCTCGGGGTCATCGCCATCCCGGTGAACCAGGGCCTCTTCCTCGCC
GGCATGGCCTGGACCACGCCCGGGCACGCGGCGCTGCTCTACGCGCTCACCCCGGTGTTCGTGTTCCTCGTCGCGCGCGT
GCGCCTGGGCGAGCGGGCCGGCCCGGCGAAGCTGGCCGGGATCGCGCTCGCGTTCGCCGGGGTGGTGGTGGTGCTGCTCG
GCCGCGGCGCGGTGGGGCTGCACGGCTCCTCGCGCCAGCTCGCCGGGGACCTGCTCATCCTGCTCGCGGTGGTGGCGTGG
TCGGTGTTCGCGGTGGCGGGGAAGCCGTACGCGCAGCGCTACGGCGCGGTCGGCTCGACCGGCGTGGCCCTCGTGCTCGG
GACGCTGGTGTACCTGCCGGTGGGCCTGGTGGCGACCGACTGGTCGCGGCTCGGCGCGCTCTCGACCACGGGCTGGGCCA
GCCTCGGGTACCTGGTGCTCCTCACCAGCGTGGTCGCCTACATCCTGTACTACTGGGCGCTCTCCCGGGCCGAGGCGAGC
CGCGTGGCGATCTGGTCCAACCTGCAGCCGGTGCTGACCGCGCTGCTCGCCTGGGCCATCGCCGGCGAGCGGCTCACCGC
GCCGTTCGTCGCGGGCGGGGCCATGGTGATCGCGGGCGTGATCCTGACCGAGCGCGGGTAG

Upstream 100 bases:

>100_bases
GCGCTGGGCGCTGGAGCGGCTGGGCGAGGCGCGCGATCCCTGAGGCACGTCGGGGCGCCGGCTTGCGCCCGGCGCACCGA
CCGCTACATTCCCGCGCCGC

Downstream 100 bases:

>100_bases
CCCCCGGCGCCGCGCGCCTTGAGCCGGCGCCGCGCCCGCGTTATCCACGGGGGCGTGAGCCTCCACGAACGACTCCGCGC
CGCGCGCGAGGGCTGGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDLLALLGLGVIAIPVNQGLFLA
GMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPAKLAGIALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAW
SVFAVAGKPYAQRYGAVGSTGVALVLGTLVYLPVGLVATDWSRLGALSTTGWASLGYLVLLTSVVAYILYYWALSRAEAS
RVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVILTERG

Sequences:

>Translated_286_residues
MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDLLALLGLGVIAIPVNQGLFLA
GMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPAKLAGIALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAW
SVFAVAGKPYAQRYGAVGSTGVALVLGTLVYLPVGLVATDWSRLGALSTTGWASLGYLVLLTSVVAYILYYWALSRAEAS
RVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVILTERG
>Mature_286_residues
MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDLLALLGLGVIAIPVNQGLFLA
GMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPAKLAGIALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAW
SVFAVAGKPYAQRYGAVGSTGVALVLGTLVYLPVGLVATDWSRLGALSTTGWASLGYLVLLTSVVAYILYYWALSRAEAS
RVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVILTERG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 29909; Mature: 29909

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLGLGVIAIPVNQGLFLAGMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPAKLAG
HHHHCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
IALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAWSVFAVAGKPYAQRYGAVGST
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
GVALVLGTLVYLPVGLVATDWSRLGALSTTGWASLGYLVLLTSVVAYILYYWALSRAEAS
HHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
RVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVILTERG
HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLGLGVIAIPVNQGLFLAGMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPAKLAG
HHHHCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
IALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAWSVFAVAGKPYAQRYGAVGST
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
GVALVLGTLVYLPVGLVATDWSRLGALSTTGWASLGYLVLLTSVVAYILYYWALSRAEAS
HHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
RVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVILTERG
HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]