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The map label for this gene is 220918072

Identifier: 220918072

GI number: 220918072

Start: 3291884

End: 3293644

Strand: Reverse

Name: 220918072

Synonym: A2cp1_2973

Alternate gene names: NA

Gene position: 3293644-3291884 (Counterclockwise)

Preceding gene: 220918075

Following gene: 220918071

Centisome position: 65.49

GC content: 73.25

Gene sequence:

>1761_bases
ATGACCGCTCGAGGCCTGGCCTGGCGGGCCGCGCTGGCTGCGCTGGCGACGGGGGCCGCGGCGTCCGTGGCACACGCCGC
GAACCCGGCGGGCGCCGGCGCGCCCGAGCCGGCGCCCATGACCACGGCCAATCGCGCGTCGGGCGTCGCGCCGCTCGCGG
TGTTCTTCGACGCCGTCGACACGCAGCAGGAGGGGCCCGCCTCGCCGTTCGTCTGGCGGAGCGGTGTCCAGCAGCCTCGC
GATCCCGAGGCGGCCGAGTACGTCTGGGACTTCGGCGATGCCGGGGCGGGCGCGTGGCGCACCACCGGGCTGAGCCGGAA
CGCGGCGACCGGCTACACGACCGCGCACGTGTACGAGACGCCGGGGGTGTACACCGCGACGCTCACCGTGACCGACGCCG
CGGGCGCGCGCCGGACGTACCGGCAGCGGATCACGGTCTCGGCGTTCGCCGGCAAGACCTACTACGTCGCGGCGAGCGGG
AACGACCGCAACCCCGGCACCAGCCCGGACGCACCGTTCGCCACGTTCGAGCGCGGCTTCGCCGCGGTGAACGGCGGTCC
GAACCGGCGCCTGCTGCTCCGTCGCGGAGACAGCTTCAGCACCGGGGGCGTGACGCTCACGGCGCCCGGCCCCGGGATCA
TCGGTGCGTACGGGGAGGGCGCGCGCCCGGTGCTGAAGGTGACGACCGGCGCCGATGGCGGGATCATCATCCGGGCCCCG
GACTGGCGGGTGATGGATCTGGACCTCGTCGGGCCCGGAGCGAACGTCGACCGCGACACGGCCATCGGGTACGCGAACGT
CATCCAGACGGTGAACGCGCTCGTGCTCCGCGTGCGCTCCACGCAGTTCCGCGTCGGCTTCGGGAACGGCGACTGGAAGC
CCATCTACGCGACCCCGCACGACGGCAACGCATGGGTCGACTGCGAGGCCACCGCTGAGAAGGCCGGTGGCATGTACGTG
GGGGGACGGCGCCTCGCGATCCTGGGCAACGACCTGCACGACCTGTCGAGCACGCACGCGCTCCGGGTCTGGCAGGCGCA
CAAGGCGGTGATCGCGCACAACCGGCTGTGGAATCCCGGCGGGACCCGGCACGCGCTCAAGCTGCATGGCCCCGGGCACG
GCGACGGGCGTCCCGAGACGCGCTGGGTGACGGTGACGGACAATCTGGTCCGCGGCAAGGTTTGGTCACTGGCCGTGGGC
CCGCAGGATGGAGAGAAGGACGAGCGGGTGAGCCACGTGGTGCTGGAGCGCAACCGCACGCACGGCGAGGCGAGCGTGCA
GGTGGACCTCCTGATCTGGGCGCGCGACGTGATGGTCCGGAACAACGTGTTCGACGGGACGGGGGCGTCGAAGTACTACA
CCGCGGTGCTCGTCGGACGCCGCGGGATCGAGCCGGACCCCGAGGGCGTGCGCGTCGTGAACAACACGATCGTCCGGACG
GACGCCGCGGACGCGTTCGCCGTCGTGCGGCTGGAGCCTGGCGCTCGGGGCGTGGTGGTCCGGAACAACCTCGCGAGCGC
GCCGCTGAGCAGGCACCCGACGCTCGTGCAAGGGGAGACGATCCCGGGGCTCCTCCAGGATCACAACCTCCTCACCACCT
CGGCAGCGTTCGTCGATCCCGCCCGCGAGGACTACCGGCTCCTGCCGCGGTCGCCCGCCGTCGATGCGGGTGCGGCGACC
GTCGAGGTGCACGCGGACTTCGCCGGGGCGCCGCGGCCACGCGGTGCGGCGCCCGACGTGGGGGCCTACGAGTCCCACTG
A

Upstream 100 bases:

>100_bases
GCAGGCGCGAGCGCCGCCCGGGGCCAGGAGCGCCGTGTGCTAGCGTGCTCCCGGTGGCGGCGTGCCGCCCGCGTGTTGGC
GCGTCGCATGGGAGGGAGAC

Downstream 100 bases:

>100_bases
GCGCGTCCGCGCTGCACGGCCGGGACGGCGCGCCCCTGCCGAAGACCGGGACGGACGGTACTTGAGGGGCCCCTGCATTC
CGCCGAGAATGCCGCCCTTG

Product: PKD domain containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTARGLAWRAALAALATGAAASVAHAANPAGAGAPEPAPMTTANRASGVAPLAVFFDAVDTQQEGPASPFVWRSGVQQPR
DPEAAEYVWDFGDAGAGAWRTTGLSRNAATGYTTAHVYETPGVYTATLTVTDAAGARRTYRQRITVSAFAGKTYYVAASG
NDRNPGTSPDAPFATFERGFAAVNGGPNRRLLLRRGDSFSTGGVTLTAPGPGIIGAYGEGARPVLKVTTGADGGIIIRAP
DWRVMDLDLVGPGANVDRDTAIGYANVIQTVNALVLRVRSTQFRVGFGNGDWKPIYATPHDGNAWVDCEATAEKAGGMYV
GGRRLAILGNDLHDLSSTHALRVWQAHKAVIAHNRLWNPGGTRHALKLHGPGHGDGRPETRWVTVTDNLVRGKVWSLAVG
PQDGEKDERVSHVVLERNRTHGEASVQVDLLIWARDVMVRNNVFDGTGASKYYTAVLVGRRGIEPDPEGVRVVNNTIVRT
DAADAFAVVRLEPGARGVVVRNNLASAPLSRHPTLVQGETIPGLLQDHNLLTTSAAFVDPAREDYRLLPRSPAVDAGAAT
VEVHADFAGAPRPRGAAPDVGAYESH

Sequences:

>Translated_586_residues
MTARGLAWRAALAALATGAAASVAHAANPAGAGAPEPAPMTTANRASGVAPLAVFFDAVDTQQEGPASPFVWRSGVQQPR
DPEAAEYVWDFGDAGAGAWRTTGLSRNAATGYTTAHVYETPGVYTATLTVTDAAGARRTYRQRITVSAFAGKTYYVAASG
NDRNPGTSPDAPFATFERGFAAVNGGPNRRLLLRRGDSFSTGGVTLTAPGPGIIGAYGEGARPVLKVTTGADGGIIIRAP
DWRVMDLDLVGPGANVDRDTAIGYANVIQTVNALVLRVRSTQFRVGFGNGDWKPIYATPHDGNAWVDCEATAEKAGGMYV
GGRRLAILGNDLHDLSSTHALRVWQAHKAVIAHNRLWNPGGTRHALKLHGPGHGDGRPETRWVTVTDNLVRGKVWSLAVG
PQDGEKDERVSHVVLERNRTHGEASVQVDLLIWARDVMVRNNVFDGTGASKYYTAVLVGRRGIEPDPEGVRVVNNTIVRT
DAADAFAVVRLEPGARGVVVRNNLASAPLSRHPTLVQGETIPGLLQDHNLLTTSAAFVDPAREDYRLLPRSPAVDAGAAT
VEVHADFAGAPRPRGAAPDVGAYESH
>Mature_585_residues
TARGLAWRAALAALATGAAASVAHAANPAGAGAPEPAPMTTANRASGVAPLAVFFDAVDTQQEGPASPFVWRSGVQQPRD
PEAAEYVWDFGDAGAGAWRTTGLSRNAATGYTTAHVYETPGVYTATLTVTDAAGARRTYRQRITVSAFAGKTYYVAASGN
DRNPGTSPDAPFATFERGFAAVNGGPNRRLLLRRGDSFSTGGVTLTAPGPGIIGAYGEGARPVLKVTTGADGGIIIRAPD
WRVMDLDLVGPGANVDRDTAIGYANVIQTVNALVLRVRSTQFRVGFGNGDWKPIYATPHDGNAWVDCEATAEKAGGMYVG
GRRLAILGNDLHDLSSTHALRVWQAHKAVIAHNRLWNPGGTRHALKLHGPGHGDGRPETRWVTVTDNLVRGKVWSLAVGP
QDGEKDERVSHVVLERNRTHGEASVQVDLLIWARDVMVRNNVFDGTGASKYYTAVLVGRRGIEPDPEGVRVVNNTIVRTD
AADAFAVVRLEPGARGVVVRNNLASAPLSRHPTLVQGETIPGLLQDHNLLTTSAAFVDPAREDYRLLPRSPAVDAGAATV
EVHADFAGAPRPRGAAPDVGAYESH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61895; Mature: 61764

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50093 PKD ; PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARGLAWRAALAALATGAAASVAHAANPAGAGAPEPAPMTTANRASGVAPLAVFFDAVD
CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHC
TQQEGPASPFVWRSGVQQPRDPEAAEYVWDFGDAGAGAWRTTGLSRNAATGYTTAHVYET
CCCCCCCCCCHHHCCCCCCCCCCHHHHEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEC
PGVYTATLTVTDAAGARRTYRQRITVSAFAGKTYYVAASGNDRNPGTSPDAPFATFERGF
CCEEEEEEEEECCCCCHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCE
AAVNGGPNRRLLLRRGDSFSTGGVTLTAPGPGIIGAYGEGARPVLKVTTGADGGIIIRAP
EEECCCCCCEEEEEECCCCCCCCEEEECCCCCEEECCCCCCCCEEEEEECCCCCEEEECC
DWRVMDLDLVGPGANVDRDTAIGYANVIQTVNALVLRVRSTQFRVGFGNGDWKPIYATPH
CCEEEEEEEECCCCCCCCCHHCHHHHHHHHHHHHHEEEECCEEEEEECCCCCEEEEECCC
DGNAWVDCEATAEKAGGMYVGGRRLAILGNDLHDLSSTHALRVWQAHKAVIAHNRLWNPG
CCCEEEEEECHHHHCCCEEECCEEEEEECCCHHHCCCCCEEEEHHHHHHHEECCCCCCCC
GTRHALKLHGPGHGDGRPETRWVTVTDNLVRGKVWSLAVGPQDGEKDERVSHVVLERNRT
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCC
HGEASVQVDLLIWARDVMVRNNVFDGTGASKYYTAVLVGRRGIEPDPEGVRVVNNTIVRT
CCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCEEEEE
DAADAFAVVRLEPGARGVVVRNNLASAPLSRHPTLVQGETIPGLLQDHNLLTTSAAFVDP
CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHCCCEEEECHHHCCC
AREDYRLLPRSPAVDAGAATVEVHADFAGAPRPRGAAPDVGAYESH
CCHHHEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARGLAWRAALAALATGAAASVAHAANPAGAGAPEPAPMTTANRASGVAPLAVFFDAVD
CCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHC
TQQEGPASPFVWRSGVQQPRDPEAAEYVWDFGDAGAGAWRTTGLSRNAATGYTTAHVYET
CCCCCCCCCCHHHCCCCCCCCCCHHHHEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEC
PGVYTATLTVTDAAGARRTYRQRITVSAFAGKTYYVAASGNDRNPGTSPDAPFATFERGF
CCEEEEEEEEECCCCCHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCE
AAVNGGPNRRLLLRRGDSFSTGGVTLTAPGPGIIGAYGEGARPVLKVTTGADGGIIIRAP
EEECCCCCCEEEEEECCCCCCCCEEEECCCCCEEECCCCCCCCEEEEEECCCCCEEEECC
DWRVMDLDLVGPGANVDRDTAIGYANVIQTVNALVLRVRSTQFRVGFGNGDWKPIYATPH
CCEEEEEEEECCCCCCCCCHHCHHHHHHHHHHHHHEEEECCEEEEEECCCCCEEEEECCC
DGNAWVDCEATAEKAGGMYVGGRRLAILGNDLHDLSSTHALRVWQAHKAVIAHNRLWNPG
CCCEEEEEECHHHHCCCEEECCEEEEEECCCHHHCCCCCEEEEHHHHHHHEECCCCCCCC
GTRHALKLHGPGHGDGRPETRWVTVTDNLVRGKVWSLAVGPQDGEKDERVSHVVLERNRT
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCC
HGEASVQVDLLIWARDVMVRNNVFDGTGASKYYTAVLVGRRGIEPDPEGVRVVNNTIVRT
CCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCEEEEE
DAADAFAVVRLEPGARGVVVRNNLASAPLSRHPTLVQGETIPGLLQDHNLLTTSAAFVDP
CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHCCCEEEECHHHCCC
AREDYRLLPRSPAVDAGAATVEVHADFAGAPRPRGAAPDVGAYESH
CCHHHEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA