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The map label for this gene is amsL [H]

Identifier: 220918064

GI number: 220918064

Start: 3279836

End: 3281338

Strand: Reverse

Name: amsL [H]

Synonym: A2cp1_2965

Alternate gene names: 220918064

Gene position: 3281338-3279836 (Counterclockwise)

Preceding gene: 220918065

Following gene: 220918062

Centisome position: 65.24

GC content: 72.72

Gene sequence:

>1503_bases
ATGCGGAACGTGCAACCTGCCGGTGCGCCGCCGCCCCTGACGCCCGAGGACGAGACGCCGGCGCCGGCGCTCGAGCAGCT
GGGCCGCCGCGTCGCCAGGGGCTCGGCGTGGGTCGCGGTCGGCTACGGCGCGAGCCAGGTCGTTCGCTTCGGCGCGAACC
TGGTCCTGACGCGCCTCCTGTTCCCGCGCGCGTTCGGGCTCATGCTCCTCGTCAACGTGTGCCTGCAAGGGGTCCACCTC
TTCTCGGACCTGGGCATCGGCGCCTCGATCGTGCAGCACCGGCGGTCCGACGCGGCGTTCTTGAACACCGCCTGGACGGT
GCAGGTGGCGCGCGGGTTCCTGCTCTGGCTCGCCACCTTCGCGGTGGCGTGGCCCGCCGCCTGGATGTACGGCGAGCCGC
AGCTCATGTGGATGCTGCCCGTCGCCGGGCTGGCGGCCTGCCTGGACGGCTTCGTCTCCACCGCGATCGACACCGCGAAC
CGCGACCTCCGGATGGCGCGGCTCCAGCTGTTCGATCTGGCGGTACAGGTCTCGGCGTCGGTCATCATGATCGCCGGCGC
CTGGCTCACCCGCAGCGTCTGGGCGCTGCTCGCCGGCACGATCGCCGCGAGCGCGATCCGCACGGTGCTCAGCCACGTGG
TGATGGGCGGCGTCCGCAACCGCTTCTGCTGGGACCGGGAAGCAGCGGCGAGCATGCTGCACTTCGGCAAGTGGGTGTTC
GTCAGCTCGGCGGTGATGTTCCTGGCGCAGCAGGGCGACCGGCTGGTGTTCGGGAAGGTGCTCCCGCTCGAGCGCCTCGG
CGTCTACAACATCGCCCTGGCCCTGGTGGACGCCCCCACCGCGCTCATCGCCGCCATCTCGTTCCGGGTCTTCTTCCCCA
TGTTCTCGGAGATGCGCCGGAGCGATCCCGACCTGGAGGCCGCGTACCGCCGGGCCAACGCGTCCATGGCGCTGCTCGCC
GGCGCCGGCGCGCTGGTGCTGATGCTGGCCGGCCCGCTGGTGGTCCAGGTGCTGTACGACGACCGCTACGCCGAGGCGAG
CTGGATCGTGCGCCTGCTCGCGCTCGGGATCTGGGGCAGCTCGCTCGTGCACTTCACCGCGTCGGTGGTGCTCGCCGGCG
GCCGGGTGAAGTGGCTCGCGGCGTCGAACGCGGCCCGCCTGGTGTGGCTGCTCGGCGCCGTCCCCCTCGCGTTCCGGCAA
TGGGGGTTCGAGGTCGCGCTCGCCTGCGTCGTCGTGGCGGATCTGCCACGGTACCTGTTCCTGGCGCTGGGGTGCCGCAG
GGACGGCCTGCACATCCTGGCGGGGGACGCCGGGCGCACGGTCAAGCTCGTGGTGGCCGCCGGCGCGGGGATGCTCGTGC
TGGAGCTGCTGGGCTCGCGCAGCGTCCTCGCCGTCGCCGTCGCTTGCGCGACGGCGCTCGCCGCCTGGCTCGCCATGAAC
CGCGAGCCCGTGCGCTGGTACGTCGAGAAGATTCGCGGCGCGCTGGCGGCCCGGCGCGGCTAG

Upstream 100 bases:

>100_bases
GCGGCGAGATCCCCGTCACCGGCGCCGACGCGCTCGAGCTCATGCGGGTCGAGCACGCGCTCGTCCGCTCGAGCGAGACC
GGCCAGCGGATCGTGCTCTG

Downstream 100 bases:

>100_bases
CGGCCGTCCGGGCGCGCCGCTCAGGCGGTGCGACGGGCCGCGGGCGGGGCCTCGGCGACCGATCCGCCGCGCGCCTCGGC
CCAGCCGATCACGGCGTCGA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MRNVQPAGAPPPLTPEDETPAPALEQLGRRVARGSAWVAVGYGASQVVRFGANLVLTRLLFPRAFGLMLLVNVCLQGVHL
FSDLGIGASIVQHRRSDAAFLNTAWTVQVARGFLLWLATFAVAWPAAWMYGEPQLMWMLPVAGLAACLDGFVSTAIDTAN
RDLRMARLQLFDLAVQVSASVIMIAGAWLTRSVWALLAGTIAASAIRTVLSHVVMGGVRNRFCWDREAAASMLHFGKWVF
VSSAVMFLAQQGDRLVFGKVLPLERLGVYNIALALVDAPTALIAAISFRVFFPMFSEMRRSDPDLEAAYRRANASMALLA
GAGALVLMLAGPLVVQVLYDDRYAEASWIVRLLALGIWGSSLVHFTASVVLAGGRVKWLAASNAARLVWLLGAVPLAFRQ
WGFEVALACVVVADLPRYLFLALGCRRDGLHILAGDAGRTVKLVVAAGAGMLVLELLGSRSVLAVAVACATALAAWLAMN
REPVRWYVEKIRGALAARRG

Sequences:

>Translated_500_residues
MRNVQPAGAPPPLTPEDETPAPALEQLGRRVARGSAWVAVGYGASQVVRFGANLVLTRLLFPRAFGLMLLVNVCLQGVHL
FSDLGIGASIVQHRRSDAAFLNTAWTVQVARGFLLWLATFAVAWPAAWMYGEPQLMWMLPVAGLAACLDGFVSTAIDTAN
RDLRMARLQLFDLAVQVSASVIMIAGAWLTRSVWALLAGTIAASAIRTVLSHVVMGGVRNRFCWDREAAASMLHFGKWVF
VSSAVMFLAQQGDRLVFGKVLPLERLGVYNIALALVDAPTALIAAISFRVFFPMFSEMRRSDPDLEAAYRRANASMALLA
GAGALVLMLAGPLVVQVLYDDRYAEASWIVRLLALGIWGSSLVHFTASVVLAGGRVKWLAASNAARLVWLLGAVPLAFRQ
WGFEVALACVVVADLPRYLFLALGCRRDGLHILAGDAGRTVKLVVAAGAGMLVLELLGSRSVLAVAVACATALAAWLAMN
REPVRWYVEKIRGALAARRG
>Mature_500_residues
MRNVQPAGAPPPLTPEDETPAPALEQLGRRVARGSAWVAVGYGASQVVRFGANLVLTRLLFPRAFGLMLLVNVCLQGVHL
FSDLGIGASIVQHRRSDAAFLNTAWTVQVARGFLLWLATFAVAWPAAWMYGEPQLMWMLPVAGLAACLDGFVSTAIDTAN
RDLRMARLQLFDLAVQVSASVIMIAGAWLTRSVWALLAGTIAASAIRTVLSHVVMGGVRNRFCWDREAAASMLHFGKWVF
VSSAVMFLAQQGDRLVFGKVLPLERLGVYNIALALVDAPTALIAAISFRVFFPMFSEMRRSDPDLEAAYRRANASMALLA
GAGALVLMLAGPLVVQVLYDDRYAEASWIVRLLALGIWGSSLVHFTASVVLAGGRVKWLAASNAARLVWLLGAVPLAFRQ
WGFEVALACVVVADLPRYLFLALGCRRDGLHILAGDAGRTVKLVVAAGAGMLVLELLGSRSVLAVAVACATALAAWLAMN
REPVRWYVEKIRGALAARRG

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 53815; Mature: 53815

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVQPAGAPPPLTPEDETPAPALEQLGRRVARGSAWVAVGYGASQVVRFGANLVLTRLL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
FPRAFGLMLLVNVCLQGVHLFSDLGIGASIVQHRRSDAAFLNTAWTVQVARGFLLWLATF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVAWPAAWMYGEPQLMWMLPVAGLAACLDGFVSTAIDTANRDLRMARLQLFDLAVQVSAS
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VIMIAGAWLTRSVWALLAGTIAASAIRTVLSHVVMGGVRNRFCWDREAAASMLHFGKWVF
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSSAVMFLAQQGDRLVFGKVLPLERLGVYNIALALVDAPTALIAAISFRVFFPMFSEMRR
HHHHHHHHHHCCCEEEEEECCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
SDPDLEAAYRRANASMALLAGAGALVLMLAGPLVVQVLYDDRYAEASWIVRLLALGIWGS
CCCCHHHHHHHCCCCEEEHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHH
SLVHFTASVVLAGGRVKWLAASNAARLVWLLGAVPLAFRQWGFEVALACVVVADLPRYLF
HHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALGCRRDGLHILAGDAGRTVKLVVAAGAGMLVLELLGSRSVLAVAVACATALAAWLAMN
HHHCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
REPVRWYVEKIRGALAARRG
CCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNVQPAGAPPPLTPEDETPAPALEQLGRRVARGSAWVAVGYGASQVVRFGANLVLTRLL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
FPRAFGLMLLVNVCLQGVHLFSDLGIGASIVQHRRSDAAFLNTAWTVQVARGFLLWLATF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVAWPAAWMYGEPQLMWMLPVAGLAACLDGFVSTAIDTANRDLRMARLQLFDLAVQVSAS
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VIMIAGAWLTRSVWALLAGTIAASAIRTVLSHVVMGGVRNRFCWDREAAASMLHFGKWVF
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSSAVMFLAQQGDRLVFGKVLPLERLGVYNIALALVDAPTALIAAISFRVFFPMFSEMRR
HHHHHHHHHHCCCEEEEEECCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
SDPDLEAAYRRANASMALLAGAGALVLMLAGPLVVQVLYDDRYAEASWIVRLLALGIWGS
CCCCHHHHHHHCCCCEEEHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHH
SLVHFTASVVLAGGRVKWLAASNAARLVWLLGAVPLAFRQWGFEVALACVVVADLPRYLF
HHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALGCRRDGLHILAGDAGRTVKLVVAAGAGMLVLELLGSRSVLAVAVACATALAAWLAMN
HHHCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
REPVRWYVEKIRGALAARRG
CCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]