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The map label for this gene is ycjS [H]

Identifier: 220918065

GI number: 220918065

Start: 3281338

End: 3283437

Strand: Reverse

Name: ycjS [H]

Synonym: A2cp1_2966

Alternate gene names: 220918065

Gene position: 3283437-3281338 (Counterclockwise)

Preceding gene: 220918066

Following gene: 220918064

Centisome position: 65.29

GC content: 74.52

Gene sequence:

>2100_bases
GTGAGCACCGAGGCCGCGTTCGGGCGGGTCGGCTGCTCGCTGCTCACGTTCCGCGCGTGGGACCGCCTGGAGGACGCGCT
CGACCGAGCGCGCGCCCACGGCTTCGACCGCGTGGACCTCGGCATCGTTCCGGGCCACTGCGACCACGTCGACCCGCTGG
CGCTGGGCGACGCGGAGCGCGAGGCGATCGCGACCGCGATCGCGGCCCGCGGCCTGGCGGTCTCGTCGGTGAACCTCCAC
CCCGGGGACCTGGTGTCGGACGACCTCGCGCTCGTGGACCGGCGCATCCGCGCCACGATGCGCCTCGCCCGGCGCATCGG
CGCGCGGGTGCTCACGCTCCCGCCCGGCCCGCTGGTCCCGCCCGAGCAATGGGAGGAGACCGCCGGCATCGTCGCCGCGC
GCATCCGGGGCTACCTGGACCTCGCCGAGCAGGCCGGGCTGACGCTGTCGCTCGAGGCTCCCCACGCGCACACGCTCGCC
GCGGACGTCGCGCAGGCGGCCCGCCTGTTCGAGCGGGTGGCGGATCCGCGCATCACCTGCACGCTCGACACGAGCCACGT
CCAGCGCGGCAACCGCGCGCCGCTCGTCGACGCGCCCGCGCGCCTCGGGGTGCCGATCGCGCACGTGCACCTGCGGGACA
CGCTGCGCGGCGAGGTCACGGTCACGCCGGGCAAGGGCGACTGCGACTACCTCCCGCTGATCGAGGCGCTCCTGCGCGAC
GGGTACGCGGGCGACTTCAACTTCGAGCTGGAGAACGAGCCCTCGTCGCGCGCCATCGTGGAGCGCGAGCTCGGCTACGC
TCGCGAGCACGTTCGCCGGATCCTGCACGGCGAGCCGCTGCCGCTGGAGAGCCGCGTCCGGCGCCAGGGGTGGTTCCGCG
CGCTCGACACCGCCGCCTGGACCGCGCGCCACCCGCGCGAGTTCGTGATCGCGCACCCGCGCCTCAAGGCGGTGCTGCGT
CCGCCGGTCCGCTTCGCGCGCCACGTCCGGGCGAACTGGGTGCCGTACCGGCAGGTCAAGTACCGCGCCGGCTGGCACGC
CGGGTGGCAGGTGGGCCGCATGGCGAGCGAGATCCCGCCGCGGCCCATGGCCGCGCTGCCGGGCGCCGACCTGGCGGAGA
TCCGGGTGGCGCTCCTGGGCTGCGGCTACACCGGTCGGTTCGAGCACGGCCCGGGCTTCCTGCGCCTGCCGGGGGTGAAG
GTCGCCGGGGTGTGCGACGTCCGGCCGGAGCGGGCAGAGCTGCTCGCCTCGCGCCTCGGGTGCCCCTCGTTCACCGACGC
CGCCCGCCTCCTGCGCGAGGTCCGCCCCACCCTGGTGGTGAACTGCACGCGCGAGTGGACGCACCGCGACACGACGCTCA
TGTGCTTCGACGCGGGCGCCGACGTGTTCTGCGAGAAGATCATGGCCGAGAGCCTGGCCAGCGGCGAGGACATGGTCCGC
GCGGCCCGGGAGAAGGGGCGCGTGCTGGGCGTCAACTACAACTGGCGCTTCCTGCCCGGCATCCAGCGCATCCGCGCGCT
CCGCGAGTCGGGCGAGCTCGGGGAGCTCCGCATGCTCCGCGCGCTCTCCAGCGCGGGCGTCCACCACCACGTCCTCGACC
TGGTGCGCTTCCTGGGCGGCCGGATCCGCGCCGTCTCCGGCGCGATCCAGGACGAGCCGGGCACCCGCGGCCTCGAGCGG
TGGAACGCGTACGCCCACGAGATGCTGTACATCCCCTCGACGTACTGCGTGGCGACGCTGGAGACGGAGGAGGGGGTGGG
CGCGAGCCTGGTCAGCTCCGGCCTCCTCGATCCCGAAGGCCTGCTCCTCACCCTGGACGCGGTGTTCGACCAGGGGTGCG
TCAGCCTGAGCGGCATCCTCGACAACGACGCGATCGGGACGCTCACCGCCTCGACGCGGAAGCGCGTGGATCTCCGGATG
CGCCACGGCGACGCGCCGGCCGGCTTCGCCCTCTCGTTCCAGCGCTCGATCGAGGCGTTCTACGTCGCCTACCGCCGGAG
CGGCGAGATCCCCGTCACCGGCGCCGACGCGCTCGAGCTCATGCGGGTCGAGCACGCGCTCGTCCGCTCGAGCGAGACCG
GCCAGCGGATCGTGCTCTGA

Upstream 100 bases:

>100_bases
ATCCGGCTGCCGGCGGGCGCTGCGCGGTGCGGCCGGGGCGATGCCCGGGGGGGAAGACATGTTCGTGCCACGCGAAGTCG
ATCGCGAGGAACCAGGTCCC

Downstream 100 bases:

>100_bases
TGCGGAACGTGCAACCTGCCGGTGCGCCGCCGCCCCTGACGCCCGAGGACGAGACGCCGGCGCCGGCGCTCGAGCAGCTG
GGCCGCCGCGTCGCCAGGGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 699; Mature: 698

Protein sequence:

>699_residues
MSTEAAFGRVGCSLLTFRAWDRLEDALDRARAHGFDRVDLGIVPGHCDHVDPLALGDAEREAIATAIAARGLAVSSVNLH
PGDLVSDDLALVDRRIRATMRLARRIGARVLTLPPGPLVPPEQWEETAGIVAARIRGYLDLAEQAGLTLSLEAPHAHTLA
ADVAQAARLFERVADPRITCTLDTSHVQRGNRAPLVDAPARLGVPIAHVHLRDTLRGEVTVTPGKGDCDYLPLIEALLRD
GYAGDFNFELENEPSSRAIVERELGYAREHVRRILHGEPLPLESRVRRQGWFRALDTAAWTARHPREFVIAHPRLKAVLR
PPVRFARHVRANWVPYRQVKYRAGWHAGWQVGRMASEIPPRPMAALPGADLAEIRVALLGCGYTGRFEHGPGFLRLPGVK
VAGVCDVRPERAELLASRLGCPSFTDAARLLREVRPTLVVNCTREWTHRDTTLMCFDAGADVFCEKIMAESLASGEDMVR
AAREKGRVLGVNYNWRFLPGIQRIRALRESGELGELRMLRALSSAGVHHHVLDLVRFLGGRIRAVSGAIQDEPGTRGLER
WNAYAHEMLYIPSTYCVATLETEEGVGASLVSSGLLDPEGLLLTLDAVFDQGCVSLSGILDNDAIGTLTASTRKRVDLRM
RHGDAPAGFALSFQRSIEAFYVAYRRSGEIPVTGADALELMRVEHALVRSSETGQRIVL

Sequences:

>Translated_699_residues
MSTEAAFGRVGCSLLTFRAWDRLEDALDRARAHGFDRVDLGIVPGHCDHVDPLALGDAEREAIATAIAARGLAVSSVNLH
PGDLVSDDLALVDRRIRATMRLARRIGARVLTLPPGPLVPPEQWEETAGIVAARIRGYLDLAEQAGLTLSLEAPHAHTLA
ADVAQAARLFERVADPRITCTLDTSHVQRGNRAPLVDAPARLGVPIAHVHLRDTLRGEVTVTPGKGDCDYLPLIEALLRD
GYAGDFNFELENEPSSRAIVERELGYAREHVRRILHGEPLPLESRVRRQGWFRALDTAAWTARHPREFVIAHPRLKAVLR
PPVRFARHVRANWVPYRQVKYRAGWHAGWQVGRMASEIPPRPMAALPGADLAEIRVALLGCGYTGRFEHGPGFLRLPGVK
VAGVCDVRPERAELLASRLGCPSFTDAARLLREVRPTLVVNCTREWTHRDTTLMCFDAGADVFCEKIMAESLASGEDMVR
AAREKGRVLGVNYNWRFLPGIQRIRALRESGELGELRMLRALSSAGVHHHVLDLVRFLGGRIRAVSGAIQDEPGTRGLER
WNAYAHEMLYIPSTYCVATLETEEGVGASLVSSGLLDPEGLLLTLDAVFDQGCVSLSGILDNDAIGTLTASTRKRVDLRM
RHGDAPAGFALSFQRSIEAFYVAYRRSGEIPVTGADALELMRVEHALVRSSETGQRIVL
>Mature_698_residues
STEAAFGRVGCSLLTFRAWDRLEDALDRARAHGFDRVDLGIVPGHCDHVDPLALGDAEREAIATAIAARGLAVSSVNLHP
GDLVSDDLALVDRRIRATMRLARRIGARVLTLPPGPLVPPEQWEETAGIVAARIRGYLDLAEQAGLTLSLEAPHAHTLAA
DVAQAARLFERVADPRITCTLDTSHVQRGNRAPLVDAPARLGVPIAHVHLRDTLRGEVTVTPGKGDCDYLPLIEALLRDG
YAGDFNFELENEPSSRAIVERELGYAREHVRRILHGEPLPLESRVRRQGWFRALDTAAWTARHPREFVIAHPRLKAVLRP
PVRFARHVRANWVPYRQVKYRAGWHAGWQVGRMASEIPPRPMAALPGADLAEIRVALLGCGYTGRFEHGPGFLRLPGVKV
AGVCDVRPERAELLASRLGCPSFTDAARLLREVRPTLVVNCTREWTHRDTTLMCFDAGADVFCEKIMAESLASGEDMVRA
AREKGRVLGVNYNWRFLPGIQRIRALRESGELGELRMLRALSSAGVHHHVLDLVRFLGGRIRAVSGAIQDEPGTRGLERW
NAYAHEMLYIPSTYCVATLETEEGVGASLVSSGLLDPEGLLLTLDAVFDQGCVSLSGILDNDAIGTLTASTRKRVDLRMR
HGDAPAGFALSFQRSIEAFYVAYRRSGEIPVTGADALELMRVEHALVRSSETGQRIVL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=365, Percent_Identity=26.027397260274, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 76828; Mature: 76697

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEAAFGRVGCSLLTFRAWDRLEDALDRARAHGFDRVDLGIVPGHCDHVDPLALGDAER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHH
EAIATAIAARGLAVSSVNLHPGDLVSDDLALVDRRIRATMRLARRIGARVLTLPPGPLVP
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
PEQWEETAGIVAARIRGYLDLAEQAGLTLSLEAPHAHTLAADVAQAARLFERVADPRITC
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEE
TLDTSHVQRGNRAPLVDAPARLGVPIAHVHLRDTLRGEVTVTPGKGDCDYLPLIEALLRD
EEEHHHHCCCCCCCCCCCCHHHCCCEEEEEEHHCCCCCEEECCCCCCCCHHHHHHHHHHC
GYAGDFNFELENEPSSRAIVERELGYAREHVRRILHGEPLPLESRVRRQGWFRALDTAAW
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TARHPREFVIAHPRLKAVLRPPVRFARHVRANWVPYRQVKYRAGWHAGWQVGRMASEIPP
HCCCCCEEEEECHHHHHHHCCHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHHHHHHCCC
RPMAALPGADLAEIRVALLGCGYTGRFEHGPGFLRLPGVKVAGVCDVRPERAELLASRLG
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHCC
CPSFTDAARLLREVRPTLVVNCTREWTHRDTTLMCFDAGADVFCEKIMAESLASGEDMVR
CCCHHHHHHHHHHCCCEEEEECCHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHH
AAREKGRVLGVNYNWRFLPGIQRIRALRESGELGELRMLRALSSAGVHHHVLDLVRFLGG
HHHHCCCEEEECCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
RIRAVSGAIQDEPGTRGLERWNAYAHEMLYIPSTYCVATLETEEGVGASLVSSGLLDPEG
CEEEHHCCCCCCCCCCHHHHHHHHHHHEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCC
LLLTLDAVFDQGCVSLSGILDNDAIGTLTASTRKRVDLRMRHGDAPAGFALSFQRSIEAF
CEEEEHHHHCCCCCEECCCCCCCCCEEEECCHHHHEEEEEECCCCCCCHHHHHHHHHHHH
YVAYRRSGEIPVTGADALELMRVEHALVRSSETGQRIVL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
STEAAFGRVGCSLLTFRAWDRLEDALDRARAHGFDRVDLGIVPGHCDHVDPLALGDAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHH
EAIATAIAARGLAVSSVNLHPGDLVSDDLALVDRRIRATMRLARRIGARVLTLPPGPLVP
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
PEQWEETAGIVAARIRGYLDLAEQAGLTLSLEAPHAHTLAADVAQAARLFERVADPRITC
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEE
TLDTSHVQRGNRAPLVDAPARLGVPIAHVHLRDTLRGEVTVTPGKGDCDYLPLIEALLRD
EEEHHHHCCCCCCCCCCCCHHHCCCEEEEEEHHCCCCCEEECCCCCCCCHHHHHHHHHHC
GYAGDFNFELENEPSSRAIVERELGYAREHVRRILHGEPLPLESRVRRQGWFRALDTAAW
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TARHPREFVIAHPRLKAVLRPPVRFARHVRANWVPYRQVKYRAGWHAGWQVGRMASEIPP
HCCCCCEEEEECHHHHHHHCCHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHHHHHHCCC
RPMAALPGADLAEIRVALLGCGYTGRFEHGPGFLRLPGVKVAGVCDVRPERAELLASRLG
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHCC
CPSFTDAARLLREVRPTLVVNCTREWTHRDTTLMCFDAGADVFCEKIMAESLASGEDMVR
CCCHHHHHHHHHHCCCEEEEECCHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHH
AAREKGRVLGVNYNWRFLPGIQRIRALRESGELGELRMLRALSSAGVHHHVLDLVRFLGG
HHHHCCCEEEECCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
RIRAVSGAIQDEPGTRGLERWNAYAHEMLYIPSTYCVATLETEEGVGASLVSSGLLDPEG
CEEEHHCCCCCCCCCCHHHHHHHHHHHEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCC
LLLTLDAVFDQGCVSLSGILDNDAIGTLTASTRKRVDLRMRHGDAPAGFALSFQRSIEAF
CEEEEHHHHCCCCCEECCCCCCCCCEEEECCHHHHEEEEEECCCCCCCHHHHHHHHHHHH
YVAYRRSGEIPVTGADALELMRVEHALVRSSETGQRIVL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]