| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is fabG [H]
Identifier: 220918043
GI number: 220918043
Start: 3254703
End: 3255473
Strand: Direct
Name: fabG [H]
Synonym: A2cp1_2944
Alternate gene names: 220918043
Gene position: 3254703-3255473 (Clockwise)
Preceding gene: 220918042
Following gene: 220918044
Centisome position: 64.71
GC content: 77.82
Gene sequence:
>771_bases ATGGACCTCGGGCTCGACGGCAAGGTCGCGGTCGTCACCGGCGGCAGCCGCGGCATCGGCCGCGCCATCGCGCTCGCGCT GGCGCGGGAGGGCGCGCGGGTGGCGGTGGGCGCGCGCGGCGCGGAGGCGCTCGCCGACGTGCGCGCCGCGCTCCAGGAGG CGAGCCCCGGCCCGCACCTGACCGTGGCCGCCGATCTCGTCACCGCGGGAGGCGTGGACCGGCTGGTGGGCGAGGCCGTC TCCGCGCTGGGCGGCCTGGACGTGCTCGTCAACAACGTGGGCGGCTCGGGCGCGCGCAGCGTCGCCGACGCCGACGAGGC CGACCTCCGCGCGGTGCTCGACCGCAACCTGTTCCCCGCGCTCCGCGCCAGCCTCCGGGCCATCCCGGAGCTGCGGCGGC GCGGCGGCGGGTCGATCGTGATGATCACGTCGATCTGGGGGCGAGAGGCCGGCGGCGGCCCGTCGTACAACGCCGCCAAG GCGGCCGAGCAGAGCCTGGCGAAGTCGCTCGGGCGCGAGCTCGCGGCCGACGGCATCCGCGTGAACTCGGTCGCTCCGGG GTCGATCGCGTTCCCCGGCGGCGGGTGGGAGCGGCGCCGGCAGGCGGACCCGGAGGGCATCGCCGAGTTCGTGCGGCGGG AGATCCCGGGCGGACGCTTCGGCACGCCGGAGGAGGTCGCGGCGGTGGTCGCGTTCCTGGCCTCGCCGCGCGCGAGCTGG GTGAACGGGGCGTGCTGGGTCGTGGACGGCGGGCAGTCCCGCAGCTTCTGA
Upstream 100 bases:
>100_bases GCGGCGGGAGGCGGCGCTGAAGCGGCTGCGCCGGGCCGAGAAGCTCGCCCTGGTGGAGCGCGCGGCCGCGAGGCGGCGCC GGCGGCGGTAGCATCCGCGC
Downstream 100 bases:
>100_bases CGTCCGGTGCTGCCGCACGCGCCCCGGGCGGCAGTGCCCCCGGACGCAGCGCACCCGCCGGGACCGGCGCTCGCCATCGG AGCGCGTGCACACCTTCTCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDLGLDGKVAVVTGGSRGIGRAIALALAREGARVAVGARGAEALADVRAALQEASPGPHLTVAADLVTAGGVDRLVGEAV SALGGLDVLVNNVGGSGARSVADADEADLRAVLDRNLFPALRASLRAIPELRRRGGGSIVMITSIWGREAGGGPSYNAAK AAEQSLAKSLGRELAADGIRVNSVAPGSIAFPGGGWERRRQADPEGIAEFVRREIPGGRFGTPEEVAAVVAFLASPRASW VNGACWVVDGGQSRSF
Sequences:
>Translated_256_residues MDLGLDGKVAVVTGGSRGIGRAIALALAREGARVAVGARGAEALADVRAALQEASPGPHLTVAADLVTAGGVDRLVGEAV SALGGLDVLVNNVGGSGARSVADADEADLRAVLDRNLFPALRASLRAIPELRRRGGGSIVMITSIWGREAGGGPSYNAAK AAEQSLAKSLGRELAADGIRVNSVAPGSIAFPGGGWERRRQADPEGIAEFVRREIPGGRFGTPEEVAAVVAFLASPRASW VNGACWVVDGGQSRSF >Mature_256_residues MDLGLDGKVAVVTGGSRGIGRAIALALAREGARVAVGARGAEALADVRAALQEASPGPHLTVAADLVTAGGVDRLVGEAV SALGGLDVLVNNVGGSGARSVADADEADLRAVLDRNLFPALRASLRAIPELRRRGGGSIVMITSIWGREAGGGPSYNAAK AAEQSLAKSLGRELAADGIRVNSVAPGSIAFPGGGWERRRQADPEGIAEFVRREIPGGRFGTPEEVAAVVAFLASPRASW VNGACWVVDGGQSRSF
Specific function: 7-Alpha-Dehydroxylation Of Cholic Acid, Yielding Deoxycholic Acid And Lithocholic Acid, Respectively. Highest Affinity With Taurochenodeoxycholic Acid. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=37.007874015748, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=34.2307692307692, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=35.3658536585366, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI66933014, Length=257, Percent_Identity=32.295719844358, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI126723750, Length=262, Percent_Identity=33.587786259542, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI5031737, Length=266, Percent_Identity=33.4586466165414, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=34.6303501945525, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=30.4347826086957, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI126723191, Length=206, Percent_Identity=36.4077669902913, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4503301, Length=257, Percent_Identity=31.1284046692607, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI32455239, Length=179, Percent_Identity=29.608938547486, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI5031765, Length=179, Percent_Identity=29.608938547486, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI59889578, Length=207, Percent_Identity=31.8840579710145, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI4503817, Length=238, Percent_Identity=25.2100840336134, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=29.8969072164948, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI7705925, Length=260, Percent_Identity=30.3846153846154, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=35.3846153846154, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI20149619, Length=192, Percent_Identity=28.6458333333333, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI4504505, Length=243, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI38348362, Length=179, Percent_Identity=30.1675977653631, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI38424085, Length=179, Percent_Identity=30.1675977653631, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=35.0597609561753, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=33.4645669291339, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=31.496062992126, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=33.7301587301587, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=33.984375, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1789378, Length=261, Percent_Identity=34.4827586206897, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=33.2, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=32.03125, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=32.6771653543307, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788459, Length=257, Percent_Identity=31.5175097276265, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=27.843137254902, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=28.4090909090909, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1786701, Length=191, Percent_Identity=30.8900523560209, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=34.6007604562738, Blast_Score=124, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=35.5805243445693, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=31.7829457364341, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193204405, Length=271, Percent_Identity=33.9483394833948, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=34.8484848484849, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=33.8345864661654, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=31.7829457364341, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=33.969465648855, Blast_Score=114, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=34.2105263157895, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=32.03125, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=32.1705426356589, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=32.4427480916031, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17538486, Length=260, Percent_Identity=32.3076923076923, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=33.206106870229, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=34.3396226415094, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=32.9545454545455, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=30.2238805970149, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=34.7826086956522, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=32.089552238806, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=31.6793893129771, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=29.0196078431373, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=31.7647058823529, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=28.0442804428044, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=30, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=29.8804780876494, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17561272, Length=259, Percent_Identity=31.2741312741313, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=31.0077519379845, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=32.6771653543307, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI115534694, Length=256, Percent_Identity=29.6875, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=31.2820512820513, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538182, Length=263, Percent_Identity=29.277566539924, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=254, Percent_Identity=27.9527559055118, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322861, Length=203, Percent_Identity=31.5270935960591, Blast_Score=75, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6323882, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322067, Length=187, Percent_Identity=31.5508021390374, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=36.328125, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=32.9411764705882, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=34.3873517786561, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=34, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=33.6, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=34.6303501945525, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=33.8582677165354, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=32.4607329842932, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24644337, Length=259, Percent_Identity=31.6602316602317, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648693, Length=205, Percent_Identity=31.219512195122, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI21355889, Length=205, Percent_Identity=31.219512195122, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24649181, Length=191, Percent_Identity=28.7958115183246, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI18859837, Length=198, Percent_Identity=32.3232323232323, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641232, Length=195, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21356301, Length=234, Percent_Identity=25.6410256410256, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580925, Length=196, Percent_Identity=31.1224489795918, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI281364494, Length=201, Percent_Identity=30.3482587064677, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=26.7015706806283, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26007; Mature: 26007
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGLDGKVAVVTGGSRGIGRAIALALAREGARVAVGARGAEALADVRAALQEASPGPHL CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCE TVAADLVTAGGVDRLVGEAVSALGGLDVLVNNVGGSGARSVADADEADLRAVLDRNLFPA EEHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHCCCCHHHHHHHHHCCHHHH LRASLRAIPELRRRGGGSIVMITSIWGREAGGGPSYNAAKAAEQSLAKSLGRELAADGIR HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEE VNSVAPGSIAFPGGGWERRRQADPEGIAEFVRREIPGGRFGTPEEVAAVVAFLASPRASW ECCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC VNGACWVVDGGQSRSF CCCEEEEEECCCCCCC >Mature Secondary Structure MDLGLDGKVAVVTGGSRGIGRAIALALAREGARVAVGARGAEALADVRAALQEASPGPHL CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCE TVAADLVTAGGVDRLVGEAVSALGGLDVLVNNVGGSGARSVADADEADLRAVLDRNLFPA EEHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHCCCCHHHHHHHHHCCHHHH LRASLRAIPELRRRGGGSIVMITSIWGREAGGGPSYNAAKAAEQSLAKSLGRELAADGIR HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEE VNSVAPGSIAFPGGGWERRRQADPEGIAEFVRREIPGGRFGTPEEVAAVVAFLASPRASW ECCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC VNGACWVVDGGQSRSF CCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA