Click here to switch to the map view.

The map label for this gene is 220918044

Identifier: 220918044

GI number: 220918044

Start: 3255590

End: 3256786

Strand: Direct

Name: 220918044

Synonym: A2cp1_2945

Alternate gene names: NA

Gene position: 3255590-3256786 (Clockwise)

Preceding gene: 220918043

Following gene: 220918045

Centisome position: 64.73

GC content: 77.53

Gene sequence:

>1197_bases
ATGCCGGAACGGGCCGACTTCAGTGCGCGCTGGATCCTGAAGCGGGCCGCGAAGGCGGCCGTGGCGGGGGCACTCACCGC
GGCGGGGATCCACCACGCGGTGCGGCTGGTCCGGCGGCGCCAGGCCGGCGGCTCCCGCGTGCTCATCCTCTCGTACCACC
GCGTGACCCCGGACTTCGGCGCCGAGTCCAGGCAGACGCTCGCCTCGCTGCTCGTCTCGACCGACACCCTCCGCCGCCAG
CTGGAGCACGTGGGGAGGCGGAACGAGATCGTCTCGCTCGCCGACGCGCGCCGCATCCTGGCGGAGCCCGCGGGCGGGCG
CCGCTCCGACGTCGTGGCGGTGACGATCGACGACGGCTACGCCGACGTGGCGCAGCACGCGCTGCCCGTGCTGCGCGCGC
TGCGCGTCCCGGCGACCGTGTTCGTGCCGACCGGCTACGTCGGCACGGCGCGCCGCCTCCCGCACGACCGGCTCCACGCG
GCGCTCACCGCGCTGGCGCGGCGGCGCATCCCGTTCGAGCGCGCCGGCCTCCAGCCCCCGCTCCAGACGTTGCTCTCCGC
CTGCGCCGAGGGCGGGCCGGCCGCCACGCTCGACCGGCTCATCGCGCGCCTCCCGCACGAGCGGCTGGTGGCGCTGGCCG
CCGCGCTGGAGCGCATGCTCGGCACCGCCGAGCAGGACCTCCCGGCCTCGACGCGCCTCATGACCTGGGACGAGGTGCGC
GCGCTCGACGCCGCCGGCGTGGACGTGGGCGGCCACACCGTGAACCACGCGGTGCTCGCGAACCTGCCGCTCGCCGAGGC
CCGCCGCGAGCTGGCCGGCTGCCGCGACCAGCTGGCCGAGCGGGTCGGCCGGGCGCCGCGCCACTTCGCCTACCCCAACG
GCTACTACACGCCGGCGGTCCAGCGCGCCGTGGCCGAGGTGGGCTTCGAGGCGGCGGTGACCATCGAGGACGAGGAGAAC
CGGCACGGCGGCTCGCCGTACGGGCTGAAGCGCAAGGTGCTCTGGGAGAACACCACGCTCGGCGCGGTCGGCTGGAGCGG
CGTGGTGGCGACCTGCAACCTCGGCGGCGTGTTCGCGACGCTGGGGCTGGCGCGGCCGGTCCCCGGGGAGCGGCCGGATC
CCCCCGCCGAGCCCGCGGCGCGGACCGCGCGCACCCAGGCCGGGGAGGCGCCCGCAGGCGCGCGGGCGGTGAGCTGA

Upstream 100 bases:

>100_bases
ACGCGCCCCGGGCGGCAGTGCCCCCGGACGCAGCGCACCCGCCGGGACCGGCGCTCGCCATCGGAGCGCGTGCACACCTT
CTCGCCGAGGAGGAGGGGGC

Downstream 100 bases:

>100_bases
GTGCGGCTGGCGCTCGTCGGGAACTGGCCGCGGCCGTACGGCGGCGTGGCGGTGCACGTGGCGGCGCTGGCCCGCGCGGC
CCGCGCGCGCGGCGTCGACG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain-Containing Protein; Glycosyl Transferase Family Polysaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MPERADFSARWILKRAAKAAVAGALTAAGIHHAVRLVRRRQAGGSRVLILSYHRVTPDFGAESRQTLASLLVSTDTLRRQ
LEHVGRRNEIVSLADARRILAEPAGGRRSDVVAVTIDDGYADVAQHALPVLRALRVPATVFVPTGYVGTARRLPHDRLHA
ALTALARRRIPFERAGLQPPLQTLLSACAEGGPAATLDRLIARLPHERLVALAAALERMLGTAEQDLPASTRLMTWDEVR
ALDAAGVDVGGHTVNHAVLANLPLAEARRELAGCRDQLAERVGRAPRHFAYPNGYYTPAVQRAVAEVGFEAAVTIEDEEN
RHGGSPYGLKRKVLWENTTLGAVGWSGVVATCNLGGVFATLGLARPVPGERPDPPAEPAARTARTQAGEAPAGARAVS

Sequences:

>Translated_398_residues
MPERADFSARWILKRAAKAAVAGALTAAGIHHAVRLVRRRQAGGSRVLILSYHRVTPDFGAESRQTLASLLVSTDTLRRQ
LEHVGRRNEIVSLADARRILAEPAGGRRSDVVAVTIDDGYADVAQHALPVLRALRVPATVFVPTGYVGTARRLPHDRLHA
ALTALARRRIPFERAGLQPPLQTLLSACAEGGPAATLDRLIARLPHERLVALAAALERMLGTAEQDLPASTRLMTWDEVR
ALDAAGVDVGGHTVNHAVLANLPLAEARRELAGCRDQLAERVGRAPRHFAYPNGYYTPAVQRAVAEVGFEAAVTIEDEEN
RHGGSPYGLKRKVLWENTTLGAVGWSGVVATCNLGGVFATLGLARPVPGERPDPPAEPAARTARTQAGEAPAGARAVS
>Mature_397_residues
PERADFSARWILKRAAKAAVAGALTAAGIHHAVRLVRRRQAGGSRVLILSYHRVTPDFGAESRQTLASLLVSTDTLRRQL
EHVGRRNEIVSLADARRILAEPAGGRRSDVVAVTIDDGYADVAQHALPVLRALRVPATVFVPTGYVGTARRLPHDRLHAA
LTALARRRIPFERAGLQPPLQTLLSACAEGGPAATLDRLIARLPHERLVALAAALERMLGTAEQDLPASTRLMTWDEVRA
LDAAGVDVGGHTVNHAVLANLPLAEARRELAGCRDQLAERVGRAPRHFAYPNGYYTPAVQRAVAEVGFEAAVTIEDEENR
HGGSPYGLKRKVLWENTTLGAVGWSGVVATCNLGGVFATLGLARPVPGERPDPPAEPAARTARTQAGEAPAGARAVS

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42513; Mature: 42382

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERADFSARWILKRAAKAAVAGALTAAGIHHAVRLVRRRQAGGSRVLILSYHRVTPDFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC
AESRQTLASLLVSTDTLRRQLEHVGRRNEIVSLADARRILAEPAGGRRSDVVAVTIDDGY
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCH
ADVAQHALPVLRALRVPATVFVPTGYVGTARRLPHDRLHAALTALARRRIPFERAGLQPP
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCH
LQTLLSACAEGGPAATLDRLIARLPHERLVALAAALERMLGTAEQDLPASTRLMTWDEVR
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHCCCCCCEEECHHHHH
ALDAAGVDVGGHTVNHAVLANLPLAEARRELAGCRDQLAERVGRAPRHFAYPNGYYTPAV
HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
QRAVAEVGFEAAVTIEDEENRHGGSPYGLKRKVLWENTTLGAVGWSGVVATCNLGGVFAT
HHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHH
LGLARPVPGERPDPPAEPAARTARTQAGEAPAGARAVS
HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PERADFSARWILKRAAKAAVAGALTAAGIHHAVRLVRRRQAGGSRVLILSYHRVTPDFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC
AESRQTLASLLVSTDTLRRQLEHVGRRNEIVSLADARRILAEPAGGRRSDVVAVTIDDGY
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCH
ADVAQHALPVLRALRVPATVFVPTGYVGTARRLPHDRLHAALTALARRRIPFERAGLQPP
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCH
LQTLLSACAEGGPAATLDRLIARLPHERLVALAAALERMLGTAEQDLPASTRLMTWDEVR
HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHCCCCCCEEECHHHHH
ALDAAGVDVGGHTVNHAVLANLPLAEARRELAGCRDQLAERVGRAPRHFAYPNGYYTPAV
HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
QRAVAEVGFEAAVTIEDEENRHGGSPYGLKRKVLWENTTLGAVGWSGVVATCNLGGVFAT
HHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHH
LGLARPVPGERPDPPAEPAARTARTQAGEAPAGARAVS
HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA