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The map label for this gene is rpiB [H]

Identifier: 220918028

GI number: 220918028

Start: 3242527

End: 3242970

Strand: Reverse

Name: rpiB [H]

Synonym: A2cp1_2929

Alternate gene names: 220918028

Gene position: 3242970-3242527 (Counterclockwise)

Preceding gene: 220918029

Following gene: 220918027

Centisome position: 64.48

GC content: 73.87

Gene sequence:

>444_bases
ATGGCCGAACGGGTGATCGCGGGCTCCGACCACGCAGGGCTGAACCTGCGGGCCGAGGCGGTGAAGGTGGCGCGGGCGGC
CGGGTTCGAGGTCGAGGACCTGGGGCCGTTCTCGGGCGAGAGCGTGGACTACCCCGACTACGCGCGGCAGGTGGCCGAGG
CGGTGGCTGCCGGGCGCGCGCGCCTGGGCATCCTGGTGTGCGGGACCGGCATCGGCATGTCGATCTCCGCCAACAAGGTC
CACGGCGTCCGGGCGGCCCACTGCGTCACCGAGTTCGACGCGCGGATGGCCCGCGCCCACAACGACGCGAACGTGCTCTG
CATCGGCGAGCGGGTGCTCGGGCTCGGCCTGGGCGCGGCCGTCGTGAAGGCGTTCCTGGAGACGCCGTTCGAGGGCGGGC
GGCACCAGCGGCGCGTCGACAAGATCGGCGCCCTGGAGCGCTGA

Upstream 100 bases:

>100_bases
CCCGGAAGGGCGAGGCGGCGGGCGGCCGGCGCACCGCGGGGCGGATGCGCGGGGGCGCGTCCTGTGGAACAATGCGCCCC
CTTCGCAAGAGGAGGCGGTG

Downstream 100 bases:

>100_bases
ACCGCCCCGTTGCCTGACCCGGCGGGGCGCGATAGAACCGCCCTCCCGCCACGCTCCCGAGGAGAGAACGAAGATGATGC
CCACGCAGCGCCTCGCCGAG

Product: ribose 5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAERVIAGSDHAGLNLRAEAVKVARAAGFEVEDLGPFSGESVDYPDYARQVAEAVAAGRARLGILVCGTGIGMSISANKV
HGVRAAHCVTEFDARMARAHNDANVLCIGERVLGLGLGAAVVKAFLETPFEGGRHQRRVDKIGALER

Sequences:

>Translated_147_residues
MAERVIAGSDHAGLNLRAEAVKVARAAGFEVEDLGPFSGESVDYPDYARQVAEAVAAGRARLGILVCGTGIGMSISANKV
HGVRAAHCVTEFDARMARAHNDANVLCIGERVLGLGLGAAVVKAFLETPFEGGRHQRRVDKIGALER
>Mature_146_residues
AERVIAGSDHAGLNLRAEAVKVARAAGFEVEDLGPFSGESVDYPDYARQVAEAVAAGRARLGILVCGTGIGMSISANKVH
GVRAAHCVTEFDARMARAHNDANVLCIGERVLGLGLGAAVVKAFLETPFEGGRHQRRVDKIGALER

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=145, Percent_Identity=48.9655172413793, Blast_Score=139, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15451; Mature: 15320

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERVIAGSDHAGLNLRAEAVKVARAAGFEVEDLGPFSGESVDYPDYARQVAEAVAAGRA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH
RLGILVCGTGIGMSISANKVHGVRAAHCVTEFDARMARAHNDANVLCIGERVLGLGLGAA
HEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCHHHH
VVKAFLETPFEGGRHQRRVDKIGALER
HHHHHHHCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AERVIAGSDHAGLNLRAEAVKVARAAGFEVEDLGPFSGESVDYPDYARQVAEAVAAGRA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH
RLGILVCGTGIGMSISANKVHGVRAAHCVTEFDARMARAHNDANVLCIGERVLGLGLGAA
HEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCHHHH
VVKAFLETPFEGGRHQRRVDKIGALER
HHHHHHHCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]