Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is engB
Identifier: 220917966
GI number: 220917966
Start: 3169305
End: 3169955
Strand: Reverse
Name: engB
Synonym: A2cp1_2867
Alternate gene names: 220917966
Gene position: 3169955-3169305 (Counterclockwise)
Preceding gene: 220917967
Following gene: 220917961
Centisome position: 63.03
GC content: 76.19
Gene sequence:
>651_bases GTGCCGATCCAGGTCGTCTCCGCCGACTTCGCCAAGACCGCCACCCGCCCCGAGGAGTGGCCGCGCGGCGCCACGCCCGA GATCGCGTTCGTGGGCCGCTCGAACGTGGGGAAGTCGTCGATGCTGAACGCGCTCGCCCGGCGCAAGGGGCTGGCGCGCG TCTCGTCCACCCCCGGCCGCACCCGCGCGCTCCAGTTCTTCGATCTCTCGTACCGGCCGACGCCGGCGGCGCGGCCGCGC GCCATCCGCTTCTGCGACCTGCCCGGCTACGGCTACGCGAAGGTGGCGCGGGCCGAGCGCGACCGCTGGACGGCGATGAT CGAGGACTACCTGCGCGACCGCGACGTGCTGCGCGCGGTGGTGCTCATCGTGGACGCGCGCCACCCGCCCTCGGAGAGCG ACGAGGACGCCGCCGCGTTCCTGGTGTCGGCGGGGCGGCGCCTCGTGGTCGCGGCGACGAAGACCGACAAGCTGCCCAAG GCGCGCCGCGTGCTCGCGCTCCAGCAGGTCGAGCGCGCGCTCGGCCTGGCGCGCGGTGACGCGGTGCCGTTCTCCGCAGT GGAGGGCACCGGCACCGACGCGCTCTGGGCGCGGCTCGCGGCGCTCGCCGCCGAGGAGCCGCAGACCGCCGAGGCGGAGC CGCCGGCCTAG
Upstream 100 bases:
>100_bases CCCCGCGCCCGGCGATGCCGCGGCGCCGGCCGGTCCCCGCGCGCCGGCGCGGCCAGCCCCGGCCCCCGCCCGCCGCCCCG GCGGCCGCTAGGAGCCCGAC
Downstream 100 bases:
>100_bases GCGTCAGTGCTGCGGGGGCGGCATCGCCGTCTCGGCGCCCATGGCCTGGTAGTCGGGCCCCTGGGTCGGCTTGCCGGTCC GCTGCCGCCACGCGTCCGTC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MPIQVVSADFAKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDLSYRPTPAARPR AIRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAVVLIVDARHPPSESDEDAAAFLVSAGRRLVVAATKTDKLPK ARRVLALQQVERALGLARGDAVPFSAVEGTGTDALWARLAALAAEEPQTAEAEPPA
Sequences:
>Translated_216_residues MPIQVVSADFAKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDLSYRPTPAARPR AIRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAVVLIVDARHPPSESDEDAAAFLVSAGRRLVVAATKTDKLPK ARRVLALQQVERALGLARGDAVPFSAVEGTGTDALWARLAALAAEEPQTAEAEPPA >Mature_215_residues PIQVVSADFAKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDLSYRPTPAARPRA IRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAVVLIVDARHPPSESDEDAAAFLVSAGRRLVVAATKTDKLPKA RRVLALQQVERALGLARGDAVPFSAVEGTGTDALWARLAALAAEEPQTAEAEPPA
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=202, Percent_Identity=29.2079207920792, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI145693205, Length=198, Percent_Identity=34.8484848484849, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_ANAD2 (B8JEQ8)
Other databases:
- EMBL: CP001359 - RefSeq: YP_002493270.1 - ProteinModelPortal: B8JEQ8 - SMR: B8JEQ8 - GeneID: 7298942 - GenomeReviews: CP001359_GR - KEGG: acp:A2cp1_2867 - HOGENOM: HBG447097 - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23478; Mature: 23347
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQVVSADFAKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGR CCCEEECCHHHHHCCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC TRALQFFDLSYRPTPAARPRAIRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAV CEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIVDARHPPSESDEDAAAFLVSAGRRLVVAATKTDKLPKARRVLALQQVERALGLARGD HHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC AVPFSAVEGTGTDALWARLAALAAEEPQTAEAEPPA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PIQVVSADFAKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGR CCEEECCHHHHHCCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC TRALQFFDLSYRPTPAARPRAIRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAV CEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIVDARHPPSESDEDAAAFLVSAGRRLVVAATKTDKLPKARRVLALQQVERALGLARGD HHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC AVPFSAVEGTGTDALWARLAALAAEEPQTAEAEPPA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA