Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917967
Identifier: 220917967
GI number: 220917967
Start: 3169965
End: 3170501
Strand: Reverse
Name: 220917967
Synonym: A2cp1_2868
Alternate gene names: NA
Gene position: 3170501-3169965 (Counterclockwise)
Preceding gene: 220917973
Following gene: 220917966
Centisome position: 63.04
GC content: 78.77
Gene sequence:
>537_bases GTGCTCCCCGACCTCCGCCTCCCGCTCCTCGCCGCCGTCCTCGTCGCCCTGGCTCCCGCCGCGCGTGCCGCAGGCGACAA GGTGGGACCCGAGGCGTGCAAGGCGTGTCACCCGTCGGCGTACGAGCGGTGGCGGGTGAGCCCGCACGCGCGCGCGCTCG AGGTGTTGCCGGCGGAGCGCCGGGACGACCCGCGCTGCCTCTCGTGCCACGCGCCCGATCGCGAGGACGGGCTCGCCGGC GTCTCCTGCGAGACCTGCCACGGCCCGGGGCGCGCCTACGCGGCCGACTACGTCATGCGCGACCGCGAGCTGGCGCGCGC CGTGGGCCTGGCGGACCCGGGCCCGAAGACCTGCCTCGCCTGCCACACCGACTCGACGCCGAGCCTGCTGCGCTTCGACC CGAAGCGGAAGCTGCCGCTCATTGATCATTGGTCCCCGCACTGGACCCCCGCGCCCGGCGATGCCGCGGCGCCGGCCGGT CCCCGCGCGCCGGCGCGGCCAGCCCCGGCCCCCGCCCGCCGCCCCGGCGGCCGCTAG
Upstream 100 bases:
>100_bases CCCCTTCCACGGGCGTGCGGTGGCGGAAACGGGGCCGAGGGCGAGCAGGAACGCGGTGGAGAGCCAGACGAGGCGCATGG CGCATTATACTCCGGCGCCC
Downstream 100 bases:
>100_bases GAGCCCGACGTGCCGATCCAGGTCGTCTCCGCCGACTTCGCCAAGACCGCCACCCGCCCCGAGGAGTGGCCGCGCGGCGC CACGCCCGAGATCGCGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLPDLRLPLLAAVLVALAPAARAAGDKVGPEACKACHPSAYERWRVSPHARALEVLPAERRDDPRCLSCHAPDREDGLAG VSCETCHGPGRAYAADYVMRDRELARAVGLADPGPKTCLACHTDSTPSLLRFDPKRKLPLIDHWSPHWTPAPGDAAAPAG PRAPARPAPAPARRPGGR
Sequences:
>Translated_178_residues MLPDLRLPLLAAVLVALAPAARAAGDKVGPEACKACHPSAYERWRVSPHARALEVLPAERRDDPRCLSCHAPDREDGLAG VSCETCHGPGRAYAADYVMRDRELARAVGLADPGPKTCLACHTDSTPSLLRFDPKRKLPLIDHWSPHWTPAPGDAAAPAG PRAPARPAPAPARRPGGR >Mature_178_residues MLPDLRLPLLAAVLVALAPAARAAGDKVGPEACKACHPSAYERWRVSPHARALEVLPAERRDDPRCLSCHAPDREDGLAG VSCETCHGPGRAYAADYVMRDRELARAVGLADPGPKTCLACHTDSTPSLLRFDPKRKLPLIDHWSPHWTPAPGDAAAPAG PRAPARPAPAPARRPGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18942; Mature: 18942
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPDLRLPLLAAVLVALAPAARAAGDKVGPEACKACHPSAYERWRVSPHARALEVLPAER CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCC RDDPRCLSCHAPDREDGLAGVSCETCHGPGRAYAADYVMRDRELARAVGLADPGPKTCLA CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE CHTDSTPSLLRFDPKRKLPLIDHWSPHWTPAPGDAAAPAGPRAPARPAPAPARRPGGR ECCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPDLRLPLLAAVLVALAPAARAAGDKVGPEACKACHPSAYERWRVSPHARALEVLPAER CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCC RDDPRCLSCHAPDREDGLAGVSCETCHGPGRAYAADYVMRDRELARAVGLADPGPKTCLA CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE CHTDSTPSLLRFDPKRKLPLIDHWSPHWTPAPGDAAAPAGPRAPARPAPAPARRPGGR ECCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA