Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is melR [C]
Identifier: 220917957
GI number: 220917957
Start: 3163305
End: 3164117
Strand: Reverse
Name: melR [C]
Synonym: A2cp1_2858
Alternate gene names: 220917957
Gene position: 3164117-3163305 (Counterclockwise)
Preceding gene: 220917958
Following gene: 220917956
Centisome position: 62.91
GC content: 79.46
Gene sequence:
>813_bases ATGGATCCGGCCGTGGCGTACCTGGGCGACATCGTCCGCCGCCGGCGCGCGGGCCGTTTCGAGGTGACCGAGGCGCTGTT CGCGGGCGGGGAGGCGCTGCCTCCGCACCGGCACGAGCGCGCCTACGTCTCGTGCCTGCTCTCGGGCACGTACCGGGAGC GGACCGCCGCCGGCGAGCGCGACTGCGCGCTCGGGACCGTGATCTGGCACCCGCCGGGCGAGGCCCACGAGGACCGGTTC TCGCCCTCGGGCGGGCACCTCCTCAACGTGGAGCTGCCGCCCGGCCTGCTCGAGGACGCGGGGGTGCGGCCCGCGCCCGG TGGCGCCGGACGCGTGGCGCGCGGGGGGGTGCCGTACGCGGCCGCGCTGGGGCTGTTCCGCGCGCTGTCCGGCGCCGGTC CGGCCGCCGAGGACGCGGCGCTGCAGCTCGCCGCGCTCGCGCCGGCCGCCTCGGAGGCGGGGCGGCCCGCCTGGCTCCGG CGGGCGGTGGAGCTCCTGCACGACCGGTCCGACGAGCCGCTCGGGCTCGCCGACGTGGCGCGGGAGGCAGGCGTCCACCC GGTGCACGTGGCGCGCACGTTCCGGCGCGTGCTGGGGTGCACGATGGGCCAGTTCCTGGCGGGCGTGCGGCTCCGGCGCG CCTTCGACCTGCTCGCCGAGCCCGGGCGGACGGTGACCGAGGCCGCCGCCGCGTGCGGGTTCGCGGATCACCCGCACCTG GCGCGCCGCTTCCGGGAGGCGACCGGGCTGACGCCCAGCCAGTACCGCGCCGCGCGGATGGGGCGTGCGCGGGCGCCGTC GCGCCGAGGTTAA
Upstream 100 bases:
>100_bases CACCGCGCGGGAGGAAGCGAAGCAGGCCGGCGGCGCATCCGGCGCCTGAGCGCGGCGCGGCAGCCCACCCGTGCGCGTGC GCCTCGGGGCCATTCGCCGT
Downstream 100 bases:
>100_bases GCCGGTACAAGCCGGCGGCGCCGCCGGCCTGCTATGCCGGCGCTCATGATCGCACCTCGCGCCACCGACCGCCTCGCCTT CCTCTCCGCCCTCGCGCTCG
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator AraC; PAS Sensor Protein; Transcriptional Regulator; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; HTH-Type Transcriptional Regulator ChbR; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Transcriptional Regulator Protein AraC Family; AraC-Type Trancriptional Regulator
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDPAVAYLGDIVRRRRAGRFEVTEALFAGGEALPPHRHERAYVSCLLSGTYRERTAAGERDCALGTVIWHPPGEAHEDRF SPSGGHLLNVELPPGLLEDAGVRPAPGGAGRVARGGVPYAAALGLFRALSGAGPAAEDAALQLAALAPAASEAGRPAWLR RAVELLHDRSDEPLGLADVAREAGVHPVHVARTFRRVLGCTMGQFLAGVRLRRAFDLLAEPGRTVTEAAAACGFADHPHL ARRFREATGLTPSQYRAARMGRARAPSRRG
Sequences:
>Translated_270_residues MDPAVAYLGDIVRRRRAGRFEVTEALFAGGEALPPHRHERAYVSCLLSGTYRERTAAGERDCALGTVIWHPPGEAHEDRF SPSGGHLLNVELPPGLLEDAGVRPAPGGAGRVARGGVPYAAALGLFRALSGAGPAAEDAALQLAALAPAASEAGRPAWLR RAVELLHDRSDEPLGLADVAREAGVHPVHVARTFRRVLGCTMGQFLAGVRLRRAFDLLAEPGRTVTEAAAACGFADHPHL ARRFREATGLTPSQYRAARMGRARAPSRRG >Mature_270_residues MDPAVAYLGDIVRRRRAGRFEVTEALFAGGEALPPHRHERAYVSCLLSGTYRERTAAGERDCALGTVIWHPPGEAHEDRF SPSGGHLLNVELPPGLLEDAGVRPAPGGAGRVARGGVPYAAALGLFRALSGAGPAAEDAALQLAALAPAASEAGRPAWLR RAVELLHDRSDEPLGLADVAREAGVHPVHVARTFRRVLGCTMGQFLAGVRLRRAFDLLAEPGRTVTEAAAACGFADHPHL ARRFREATGLTPSQYRAARMGRARAPSRRG
Specific function: Transcription Activator For The Expression Of The Melab Operon. Melr Binds At Two Sites Located Upstream Of The Melab Transcription Site. [C]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28673; Mature: 28673
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPAVAYLGDIVRRRRAGRFEVTEALFAGGEALPPHRHERAYVSCLLSGTYRERTAAGER CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCC DCALGTVIWHPPGEAHEDRFSPSGGHLLNVELPPGLLEDAGVRPAPGGAGRVARGGVPYA CCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHH AALGLFRALSGAGPAAEDAALQLAALAPAASEAGRPAWLRRAVELLHDRSDEPLGLADVA HHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH REAGVHPVHVARTFRRVLGCTMGQFLAGVRLRRAFDLLAEPGRTVTEAAAACGFADHPHL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH ARRFREATGLTPSQYRAARMGRARAPSRRG HHHHHHHHCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDPAVAYLGDIVRRRRAGRFEVTEALFAGGEALPPHRHERAYVSCLLSGTYRERTAAGER CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCC DCALGTVIWHPPGEAHEDRFSPSGGHLLNVELPPGLLEDAGVRPAPGGAGRVARGGVPYA CCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHH AALGLFRALSGAGPAAEDAALQLAALAPAASEAGRPAWLRRAVELLHDRSDEPLGLADVA HHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH REAGVHPVHVARTFRRVLGCTMGQFLAGVRLRRAFDLLAEPGRTVTEAAAACGFADHPHL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH ARRFREATGLTPSQYRAARMGRARAPSRRG HHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA