Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917956
Identifier: 220917956
GI number: 220917956
Start: 3162036
End: 3163271
Strand: Reverse
Name: 220917956
Synonym: A2cp1_2857
Alternate gene names: NA
Gene position: 3163271-3162036 (Counterclockwise)
Preceding gene: 220917957
Following gene: 220917951
Centisome position: 62.9
GC content: 76.13
Gene sequence:
>1236_bases ATGCCGGCGCTCATGATCGCACCTCGCGCCACCGACCGCCTCGCCTTCCTCTCCGCCCTCGCGCTCGTCGCCGCGGCGCC GGCCGTGACGCCCGCGCTGCCCGTCCAGGCTTCGCCCGCCCCTCGCGTCACCGAGTGGGAGGTCACCGCCGCGCCCGCCT ACGACGCGCTCTGCCTGATCGGCGTGCTGGGCGGCGATCCGTTCTACGTGCGGTTCTTCGAGGAGGAGTACCGCCACTTC GACGCGCGGCTCACCCCCGCCGAGCGCGACGCCTTCCGAGCCGTGAAGCGGATCCTGAAGGACGAGGCGGCGGGCATCGT CTCGGCGCGCCTCGGCCTCGTGTTCTCGGCCGCCGAGGCGGGCGGGCTCGGCGCCGCGCCGCCCCGCGCGCGCGGCGCGA TCGCGTGGCTGCTGCGGGTGGCGCGCGTTCCGGCGCGGGCGCGGGCCGCGCTCGAGCGCACCCCGTACTGGAGCGAGGAG GGTTGGGCCACGTACGAGCGCGCCCGGCCGCACCTGATCCGCGCGCTCCAGGCGCTCGGCCGCGCCGGGTTCGAGGACTT CTGGGAGCGCCGGGCGCGCCCGCGGATCGAGCGGCGCATCGCCGAGCTGGCTCCGTTCCTCCGCCCCCACGACGTCGTCC CGGCCGTCGAGGCGCGGCTCGGGAAGGCGCTTCCATCGCGCCGCATCACCGTCCACGTGCTCGCGTTCGCGAGGCCGCAC GGGATCCGCATCGTCGGGACCCGGTTCCTCGCCGACGTGACGTTCCCCTCCGACGTGATGGTCCGCAACGCGATCCACGA GATGATGCACCCACCGTACGAGGCCACGCGCCCCGAGATCGCGCAGGCGGTGGCGGCGCTCGGGGCCGATCCGGTCATCC GGGCGCGCGTGGACCACCACGATCCCTCGTTCGGCTACAACACCGTCGAGGGCTACGTGGAGGAGGACGTGGTGGAGGCC ATGGAGGGCGTGGTCGCGGAGCAGCTCGGCGTCGGGCGCCCGGATCAGGCTGGCTACTGGCGCGAGCACGACGGCGGCAT GCACGTGCTCGCCGCCGCGCTCTACGTCGAGCTCCGGCGCGCCGAGGCGGCCGCGGGCGGCCCGGTGGTGGTCCCGGCGT TCCTGGTGGACGCGGTGCGACGCGGCGACCTCACCGGCGAGCGGCTGGCGCGCACGGTCGAGGCGTTCCTGGGGCCCGGC GCGCTGGCCGGGGCGGCGCCGACGGCGGGACGGTGA
Upstream 100 bases:
>100_bases GCTGACGCCCAGCCAGTACCGCGCCGCGCGGATGGGGCGTGCGCGGGCGCCGTCGCGCCGAGGTTAAGCCGGTACAAGCC GGCGGCGCCGCCGGCCTGCT
Downstream 100 bases:
>100_bases TCCGCCGCCGGCGCGCTCGGGCCTCAGCGCGACTCGTACGCGCCCAGGTCGTACCCGGCGCCGCGCGGGCGCGCCGACAG CTGGTAGTCGAGCCCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPALMIAPRATDRLAFLSALALVAAAPAVTPALPVQASPAPRVTEWEVTAAPAYDALCLIGVLGGDPFYVRFFEEEYRHF DARLTPAERDAFRAVKRILKDEAAGIVSARLGLVFSAAEAGGLGAAPPRARGAIAWLLRVARVPARARAALERTPYWSEE GWATYERARPHLIRALQALGRAGFEDFWERRARPRIERRIAELAPFLRPHDVVPAVEARLGKALPSRRITVHVLAFARPH GIRIVGTRFLADVTFPSDVMVRNAIHEMMHPPYEATRPEIAQAVAALGADPVIRARVDHHDPSFGYNTVEGYVEEDVVEA MEGVVAEQLGVGRPDQAGYWREHDGGMHVLAAALYVELRRAEAAAGGPVVVPAFLVDAVRRGDLTGERLARTVEAFLGPG ALAGAAPTAGR
Sequences:
>Translated_411_residues MPALMIAPRATDRLAFLSALALVAAAPAVTPALPVQASPAPRVTEWEVTAAPAYDALCLIGVLGGDPFYVRFFEEEYRHF DARLTPAERDAFRAVKRILKDEAAGIVSARLGLVFSAAEAGGLGAAPPRARGAIAWLLRVARVPARARAALERTPYWSEE GWATYERARPHLIRALQALGRAGFEDFWERRARPRIERRIAELAPFLRPHDVVPAVEARLGKALPSRRITVHVLAFARPH GIRIVGTRFLADVTFPSDVMVRNAIHEMMHPPYEATRPEIAQAVAALGADPVIRARVDHHDPSFGYNTVEGYVEEDVVEA MEGVVAEQLGVGRPDQAGYWREHDGGMHVLAAALYVELRRAEAAAGGPVVVPAFLVDAVRRGDLTGERLARTVEAFLGPG ALAGAAPTAGR >Mature_410_residues PALMIAPRATDRLAFLSALALVAAAPAVTPALPVQASPAPRVTEWEVTAAPAYDALCLIGVLGGDPFYVRFFEEEYRHFD ARLTPAERDAFRAVKRILKDEAAGIVSARLGLVFSAAEAGGLGAAPPRARGAIAWLLRVARVPARARAALERTPYWSEEG WATYERARPHLIRALQALGRAGFEDFWERRARPRIERRIAELAPFLRPHDVVPAVEARLGKALPSRRITVHVLAFARPHG IRIVGTRFLADVTFPSDVMVRNAIHEMMHPPYEATRPEIAQAVAALGADPVIRARVDHHDPSFGYNTVEGYVEEDVVEAM EGVVAEQLGVGRPDQAGYWREHDGGMHVLAAALYVELRRAEAAAGGPVVVPAFLVDAVRRGDLTGERLARTVEAFLGPGA LAGAAPTAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44536; Mature: 44404
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALMIAPRATDRLAFLSALALVAAAPAVTPALPVQASPAPRVTEWEVTAAPAYDALCLI CCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH GVLGGDPFYVRFFEEEYRHFDARLTPAERDAFRAVKRILKDEAAGIVSARLGLVFSAAEA HHHCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGLGAAPPRARGAIAWLLRVARVPARARAALERTPYWSEEGWATYERARPHLIRALQALG CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHH RAGFEDFWERRARPRIERRIAELAPFLRPHDVVPAVEARLGKALPSRRITVHVLAFARPH CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCC GIRIVGTRFLADVTFPSDVMVRNAIHEMMHPPYEATRPEIAQAVAALGADPVIRARVDHH CEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCC DPSFGYNTVEGYVEEDVVEAMEGVVAEQLGVGRPDQAGYWREHDGGMHVLAAALYVELRR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AEAAAGGPVVVPAFLVDAVRRGDLTGERLARTVEAFLGPGALAGAAPTAGR HHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCC >Mature Secondary Structure PALMIAPRATDRLAFLSALALVAAAPAVTPALPVQASPAPRVTEWEVTAAPAYDALCLI CCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH GVLGGDPFYVRFFEEEYRHFDARLTPAERDAFRAVKRILKDEAAGIVSARLGLVFSAAEA HHHCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGLGAAPPRARGAIAWLLRVARVPARARAALERTPYWSEEGWATYERARPHLIRALQALG CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHH RAGFEDFWERRARPRIERRIAELAPFLRPHDVVPAVEARLGKALPSRRITVHVLAFARPH CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCC GIRIVGTRFLADVTFPSDVMVRNAIHEMMHPPYEATRPEIAQAVAALGADPVIRARVDHH CEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCC DPSFGYNTVEGYVEEDVVEAMEGVVAEQLGVGRPDQAGYWREHDGGMHVLAAALYVELRR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AEAAAGGPVVVPAFLVDAVRRGDLTGERLARTVEAFLGPGALAGAAPTAGR HHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA