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The map label for this gene is arnC [H]

Identifier: 220917904

GI number: 220917904

Start: 3102637

End: 3103386

Strand: Reverse

Name: arnC [H]

Synonym: A2cp1_2805

Alternate gene names: 220917904

Gene position: 3103386-3102637 (Counterclockwise)

Preceding gene: 220917905

Following gene: 220917903

Centisome position: 61.71

GC content: 73.73

Gene sequence:

>750_bases
ATGACGCCTGGGCGCGCGCTGGTGTGCCTGCCGACGTACGAGGAGCGGGACAACCTCGAGCCGATCCTCCGCGCGATCCT
GGAGGCCGCACCGTCCGTCGAGGTGCTGGTCATCGACGACAACTCGCCCGACGGGACCGGCCGGCTCGCCGACGCCTTCG
CCGCGCGCGAGCCGCGCGTGCACGTGCTCCACCGCGCCGGCAAGGAGGGGCTGGGCCGGGCGTACCTGGCCGGCTTCGCC
TGGGCGCTGGAGCGCGGCTACGACCTCGTGCTCGAGATGGACGCCGACTTCTCGCACGACCCGAGGTACCTGCCCGCGCT
GCTGGCCCGCGCCGCCGACGCCGACCTGGTGCTCGGCTCGCGCTACGTGCCGGGGGGCGGGACGGTGAACTGGGGGCTCG
GGCGGAAGCTCATCTCGCGCGGCGGGAGCCTCTACGCCCGCACCATCCTGGGCGTCCGCGTCCGCGACCTCACCGGCGGC
TTCAAGTGCTTCCGCCGCGAGGTGCTGGAGGCCATCGACCTGCCCTCGGTGGAGTGCTCCGGCTACGCGTTCCAGATCGA
GCTGACGTACCGGGCCATCCGGCGCGGGTTCCGGGTCGCGGAGATCCCCATCGTGTTCGCCGACCGCCGGGTGGGGCAGT
CCAAGATGTCCCGGCGCATCGTGCTCGAGGCCATCCGCAAGGTGTGGGCGATCCGCTTCTCCGCGTTCGCGCGCTCGGAG
GCGCGCCCCGGCCTGCCGCCGGCGGTGTGA

Upstream 100 bases:

>100_bases
CGCGGGAGGCGCAGATCGCGGCGCTGCGGGAGGTGCGGGCGTCGCTGGGCGAGCCGGGCGCGCCGCTCCGGGTCGCGGAA
GAGGTGCTGGGGGTGATGCG

Downstream 100 bases:

>100_bases
TCGCCGCGCCGCTCGCCGCTCCGCGCTTTCCCGCCCACCGTGGGCGAGGTAGGCTGCGCGCCCGATGGCCCTGCAGCTCG
CGACCCTCTGCTTCGTCTCC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTPGRALVCLPTYEERDNLEPILRAILEAAPSVEVLVIDDNSPDGTGRLADAFAAREPRVHVLHRAGKEGLGRAYLAGFA
WALERGYDLVLEMDADFSHDPRYLPALLARAADADLVLGSRYVPGGGTVNWGLGRKLISRGGSLYARTILGVRVRDLTGG
FKCFRREVLEAIDLPSVECSGYAFQIELTYRAIRRGFRVAEIPIVFADRRVGQSKMSRRIVLEAIRKVWAIRFSAFARSE
ARPGLPPAV

Sequences:

>Translated_249_residues
MTPGRALVCLPTYEERDNLEPILRAILEAAPSVEVLVIDDNSPDGTGRLADAFAAREPRVHVLHRAGKEGLGRAYLAGFA
WALERGYDLVLEMDADFSHDPRYLPALLARAADADLVLGSRYVPGGGTVNWGLGRKLISRGGSLYARTILGVRVRDLTGG
FKCFRREVLEAIDLPSVECSGYAFQIELTYRAIRRGFRVAEIPIVFADRRVGQSKMSRRIVLEAIRKVWAIRFSAFARSE
ARPGLPPAV
>Mature_248_residues
TPGRALVCLPTYEERDNLEPILRAILEAAPSVEVLVIDDNSPDGTGRLADAFAAREPRVHVLHRAGKEGLGRAYLAGFAW
ALERGYDLVLEMDADFSHDPRYLPALLARAADADLVLGSRYVPGGGTVNWGLGRKLISRGGSLYARTILGVRVRDLTGGF
KCFRREVLEAIDLPSVECSGYAFQIELTYRAIRRGFRVAEIPIVFADRRVGQSKMSRRIVLEAIRKVWAIRFSAFARSEA
RPGLPPAV

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=217, Percent_Identity=37.3271889400922, Blast_Score=145, Evalue=4e-35,
Organism=Escherichia coli, GI1788588, Length=217, Percent_Identity=28.110599078341, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71999402, Length=228, Percent_Identity=40.3508771929825, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6325441, Length=240, Percent_Identity=31.25, Blast_Score=109, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24585265, Length=217, Percent_Identity=38.2488479262673, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27477; Mature: 27346

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGRALVCLPTYEERDNLEPILRAILEAAPSVEVLVIDDNSPDGTGRLADAFAAREPRV
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCCHH
HVLHRAGKEGLGRAYLAGFAWALERGYDLVLEMDADFSHDPRYLPALLARAADADLVLGS
HHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECC
RYVPGGGTVNWGLGRKLISRGGSLYARTILGVRVRDLTGGFKCFRREVLEAIDLPSVECS
EECCCCCEEEHHHHHHHHHCCCCEEEHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
GYAFQIELTYRAIRRGFRVAEIPIVFADRRVGQSKMSRRIVLEAIRKVWAIRFSAFARSE
CEEEEEEEEHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ARPGLPPAV
CCCCCCCCC
>Mature Secondary Structure 
TPGRALVCLPTYEERDNLEPILRAILEAAPSVEVLVIDDNSPDGTGRLADAFAAREPRV
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCCHH
HVLHRAGKEGLGRAYLAGFAWALERGYDLVLEMDADFSHDPRYLPALLARAADADLVLGS
HHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECC
RYVPGGGTVNWGLGRKLISRGGSLYARTILGVRVRDLTGGFKCFRREVLEAIDLPSVECS
EECCCCCEEEHHHHHHHHHCCCCEEEHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
GYAFQIELTYRAIRRGFRVAEIPIVFADRRVGQSKMSRRIVLEAIRKVWAIRFSAFARSE
CEEEEEEEEHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ARPGLPPAV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA