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The map label for this gene is ychE [C]

Identifier: 220917903

GI number: 220917903

Start: 3101919

End: 3102572

Strand: Reverse

Name: ychE [C]

Synonym: A2cp1_2804

Alternate gene names: 220917903

Gene position: 3102572-3101919 (Counterclockwise)

Preceding gene: 220917904

Following gene: 220917902

Centisome position: 61.69

GC content: 71.41

Gene sequence:

>654_bases
ATGGCCCTGCAGCTCGCGACCCTCTGCTTCGTCTCCTTCTCGGCCCTGTTCTTCGTGGTCGACCCGTTCTCGGCGGTGCC
GTTCTTCCTGGCGCTGACCCGCAACGACGACCCGCGCCGGCGCCGCGAGATCGCGCTGCGCGCGTCGGTGACCGCGTTCG
CCGTGCTCGCCGCGTTCGCGCTCACCGGCGAGTGGATCTTCCGCCTCCTCGGCATCGGCCTGCCCGCGTTCAAGGTGGCG
GGCGGCGTGGTGCTGCTGCTGCTCGCCCTGGACATGGTGCGCACCCAGCCGTCCCGGACCCGGATCACGCAGGGTGAAGT
GGACGCCAGCGCCGACAAGGAGGACGTGGCCATCGTGCCGCTGGCCATGCCGCTGCTGGCCGGCCCCGGCTCCATCGCCA
CCGCCATCGTGCTGATGGTGCGCGCGCGCAGCGAGGACTGGTGGCACCCGCTGCCGGTCCTGCTCGCCATCGCGCTCACC
TGCTTGGCCAGCTACCTCATCCTTGCGGGTGCGGCCCGGACCGAGAAGGTGCTCGGGCGCACCGGCCTCGCCATCCTGGA
GCGCGTCGCCGGCCTGCTGCTGGTGGCCATCGCCGTCCAGTTCATGATGGACGGGCTCGCGGAAGGGTTGCCGCGGACCT
TCCGGCTCCAATAA

Upstream 100 bases:

>100_bases
TCGGAGGCGCGCCCCGGCCTGCCGCCGGCGGTGTGATCGCCGCGCCGCTCGCCGCTCCGCGCTTTCCCGCCCACCGTGGG
CGAGGTAGGCTGCGCGCCCG

Downstream 100 bases:

>100_bases
ATCCCCGGTCCCCCACCTACCCCCGAGGAGACCATGCCCCGCGTGAAGAACTTCAATGCCGGCCCCGCCGCCCTCCCTCT
GCCCGCGCTGGAGCGCGCCC

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MALQLATLCFVSFSALFFVVDPFSAVPFFLALTRNDDPRRRREIALRASVTAFAVLAAFALTGEWIFRLLGIGLPAFKVA
GGVVLLLLALDMVRTQPSRTRITQGEVDASADKEDVAIVPLAMPLLAGPGSIATAIVLMVRARSEDWWHPLPVLLAIALT
CLASYLILAGAARTEKVLGRTGLAILERVAGLLLVAIAVQFMMDGLAEGLPRTFRLQ

Sequences:

>Translated_217_residues
MALQLATLCFVSFSALFFVVDPFSAVPFFLALTRNDDPRRRREIALRASVTAFAVLAAFALTGEWIFRLLGIGLPAFKVA
GGVVLLLLALDMVRTQPSRTRITQGEVDASADKEDVAIVPLAMPLLAGPGSIATAIVLMVRARSEDWWHPLPVLLAIALT
CLASYLILAGAARTEKVLGRTGLAILERVAGLLLVAIAVQFMMDGLAEGLPRTFRLQ
>Mature_216_residues
ALQLATLCFVSFSALFFVVDPFSAVPFFLALTRNDDPRRRREIALRASVTAFAVLAAFALTGEWIFRLLGIGLPAFKVAG
GVVLLLLALDMVRTQPSRTRITQGEVDASADKEDVAIVPLAMPLLAGPGSIATAIVLMVRARSEDWWHPLPVLLAIALTC
LASYLILAGAARTEKVLGRTGLAILERVAGLLLVAIAVQFMMDGLAEGLPRTFRLQ

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=30.1980198019802, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1789842, Length=191, Percent_Identity=30.8900523560209, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1787809, Length=198, Percent_Identity=29.7979797979798, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23342; Mature: 23211

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQLATLCFVSFSALFFVVDPFSAVPFFLALTRNDDPRRRREIALRASVTAFAVLAAFA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LTGEWIFRLLGIGLPAFKVAGGVVLLLLALDMVRTQPSRTRITQGEVDASADKEDVAIVP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHH
LAMPLLAGPGSIATAIVLMVRARSEDWWHPLPVLLAIALTCLASYLILAGAARTEKVLGR
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TGLAILERVAGLLLVAIAVQFMMDGLAEGLPRTFRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ALQLATLCFVSFSALFFVVDPFSAVPFFLALTRNDDPRRRREIALRASVTAFAVLAAFA
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LTGEWIFRLLGIGLPAFKVAGGVVLLLLALDMVRTQPSRTRITQGEVDASADKEDVAIVP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHH
LAMPLLAGPGSIATAIVLMVRARSEDWWHPLPVLLAIALTCLASYLILAGAARTEKVLGR
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TGLAILERVAGLLLVAIAVQFMMDGLAEGLPRTFRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]