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The map label for this gene is yloC [H]

Identifier: 220917887

GI number: 220917887

Start: 3082866

End: 3083741

Strand: Reverse

Name: yloC [H]

Synonym: A2cp1_2788

Alternate gene names: 220917887

Gene position: 3083741-3082866 (Counterclockwise)

Preceding gene: 220917888

Following gene: 220917886

Centisome position: 61.32

GC content: 75.11

Gene sequence:

>876_bases
ATGATCCGCAGCATGACGGGGTTCGGGGCCGGCCACGGCGCCGCCTCGGGCGAGGAGGTGGACGTCGAGGTCCGCTCCGT
CAACCACAAGTACTGCGAGGTGAAGGTCCGCCTCCCCCGCGAGCTCGCCGCGCTCGAGCACGAGATCGCGAAGGCCGTGA
AGGAGCGGCTGGCGCGCGGCGGCGTGGAGGTCGCGGTCCGGCGCGCCACGGCCGGCGGCGGCCTGGCGGCTCGCGTTGAC
GTGGCGCTGGCCGAGTCGTACGCGCGTGCGTTCGGGGAGATCCAGGCGCGCCTCGGGCTCCCGGGCGCGATCACGCTCGC
GGACGTGCTGGCGGCGGACGGCGTCGTCCGGTTGGAGGAGCGCACCGTGGACGCCGCCGCGGGGGGCACGGCGGCCCGGG
CGGCGCTCGCCCACGCGCTCGACGCGCTGGTGGAGATGCGCGCGCGGGAGGGCGCCGCGCTGGCGCGCGACCTCGGCGCC
CGGCTCGACGCGGTCGAGCAGATGGTGGCGCGCGTGGCCGAGCTGTCGCCGCGCGTGGTGGAGCAGTACCGGACGCGCCT
GCAGGAGCGGATCGCCGAGCTGACGCAGGGGATCGCGCTCGACCCGGGGCGGCTGGCGCAGGAGGTGGCGCTCTTCGCCG
ACCGGACCGACGTGGCCGAGGAGATCACGCGGCTGCACAGCCACCTCGCCCAGGTGCGCGCGCTGCTCGCCTCGGCGGAG
CCGGCCGGCCGCAAGCTCGACTTCCTCGTCCAGGAGATGCACCGCGAGACGAACACCATCGGCTCGAAGTCGCAGAGCGC
CGAGGTAGCCGGCATCGTGGTGGCGCTCAAGGCGGAGATCGAGCGCATGCGCGAGCAGGTGCAGAATGTCGAGTGA

Upstream 100 bases:

>100_bases
CTCCTTTGAGCCGGGGGCGGCCCCGCCGCGCCCGCCTTGACGCTCCCCGGGCCCGGGACTACGGTCCGGGACCGATGCGT
CCAACCCCCGGGAGTCGCCG

Downstream 100 bases:

>100_bases
CGCCGCGCACGAGCGGCTCCCGGGGCTGCTGCTGGTGCTCTCGGCGCCGTCGGGGGCGGGGAAGACCACGCTCGCGCACC
GGCTGCGGGACGCCTCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIRSMTGFGAGHGAASGEEVDVEVRSVNHKYCEVKVRLPRELAALEHEIAKAVKERLARGGVEVAVRRATAGGGLAARVD
VALAESYARAFGEIQARLGLPGAITLADVLAADGVVRLEERTVDAAAGGTAARAALAHALDALVEMRAREGAALARDLGA
RLDAVEQMVARVAELSPRVVEQYRTRLQERIAELTQGIALDPGRLAQEVALFADRTDVAEEITRLHSHLAQVRALLASAE
PAGRKLDFLVQEMHRETNTIGSKSQSAEVAGIVVALKAEIERMREQVQNVE

Sequences:

>Translated_291_residues
MIRSMTGFGAGHGAASGEEVDVEVRSVNHKYCEVKVRLPRELAALEHEIAKAVKERLARGGVEVAVRRATAGGGLAARVD
VALAESYARAFGEIQARLGLPGAITLADVLAADGVVRLEERTVDAAAGGTAARAALAHALDALVEMRAREGAALARDLGA
RLDAVEQMVARVAELSPRVVEQYRTRLQERIAELTQGIALDPGRLAQEVALFADRTDVAEEITRLHSHLAQVRALLASAE
PAGRKLDFLVQEMHRETNTIGSKSQSAEVAGIVVALKAEIERMREQVQNVE
>Mature_291_residues
MIRSMTGFGAGHGAASGEEVDVEVRSVNHKYCEVKVRLPRELAALEHEIAKAVKERLARGGVEVAVRRATAGGGLAARVD
VALAESYARAFGEIQARLGLPGAITLADVLAADGVVRLEERTVDAAAGGTAARAALAHALDALVEMRAREGAALARDLGA
RLDAVEQMVARVAELSPRVVEQYRTRLQERIAELTQGIALDPGRLAQEVALFADRTDVAEEITRLHSHLAQVRALLASAE
PAGRKLDFLVQEMHRETNTIGSKSQSAEVAGIVVALKAEIERMREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=295, Percent_Identity=36.6101694915254, Blast_Score=154, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31111; Mature: 31111

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSMTGFGAGHGAASGEEVDVEVRSVNHKYCEVKVRLPRELAALEHEIAKAVKERLARG
CCCCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHC
GVEVAVRRATAGGGLAARVDVALAESYARAFGEIQARLGLPGAITLADVLAADGVVRLEE
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEHHH
RTVDAAAGGTAARAALAHALDALVEMRAREGAALARDLGARLDAVEQMVARVAELSPRVV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQYRTRLQERIAELTQGIALDPGRLAQEVALFADRTDVAEEITRLHSHLAQVRALLASAE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAGRKLDFLVQEMHRETNTIGSKSQSAEVAGIVVALKAEIERMREQVQNVE
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSMTGFGAGHGAASGEEVDVEVRSVNHKYCEVKVRLPRELAALEHEIAKAVKERLARG
CCCCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHC
GVEVAVRRATAGGGLAARVDVALAESYARAFGEIQARLGLPGAITLADVLAADGVVRLEE
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEHHH
RTVDAAAGGTAARAALAHALDALVEMRAREGAALARDLGARLDAVEQMVARVAELSPRVV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQYRTRLQERIAELTQGIALDPGRLAQEVALFADRTDVAEEITRLHSHLAQVRALLASAE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAGRKLDFLVQEMHRETNTIGSKSQSAEVAGIVVALKAEIERMREQVQNVE
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]