Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is gmk [H]
Identifier: 220917886
GI number: 220917886
Start: 3082199
End: 3082876
Strand: Reverse
Name: gmk [H]
Synonym: A2cp1_2787
Alternate gene names: 220917886
Gene position: 3082876-3082199 (Counterclockwise)
Preceding gene: 220917887
Following gene: 220917885
Centisome position: 61.3
GC content: 76.84
Gene sequence:
>678_bases ATGTCGAGTGACGCCGCGCACGAGCGGCTCCCGGGGCTGCTGCTGGTGCTCTCGGCGCCGTCGGGGGCGGGGAAGACCAC GCTCGCGCACCGGCTGCGGGACGCCTCGCCCGACGCCGTGTTCTCGATCTCGGCCACCACCCGCGCCCCGCGCGGCGCCG AGCGCGAGGGCGTGGACTACCACTTCGTCACCGCGGAGCGGTTTGCCGATCTGGTGGCGCAGGGCGCGTTCGCGGAGTGG GCCGAGGTGCACGGCCAGCGCTACGGCACGCTGCGCGCCACGGTGGAGCAGGCGCTCGCCGCCGGGAAGCTCGCGCTGTT CGACATCGACGTGCAGGGCGGCGCGCAGATCAAGGCGGCGTGGCCGCAGCAGGCCGCCACCGTGCTCGTGCTGCCGCCGG ACCAGGCGGAGCTGGAGCGGCGGCTGCGAGGGCGCGACACCGACAGCGACGAGACGATCCGCCGCCGGCTGGTGGCGGCG CGCGCCGAGGTCGCGCGCGGCCTCGGCTCGTACGACTACGTGGTGGTGAACGACGTGCTGGAGGGCGCCCTCGCGCAGCT CCAGGCGATCGTGCGGCACGAGCGGCTGCGCCACGCCGGGCGGTGGGATCCGGAGGCCGCGCGGGTGGCCGAGGCCTGCC GCCGCAGCGCCGCGCCGCTCGGCGGCTGGGCGTCCTAG
Upstream 100 bases:
>100_bases GAGACGAACACCATCGGCTCGAAGTCGCAGAGCGCCGAGGTAGCCGGCATCGTGGTGGCGCTCAAGGCGGAGATCGAGCG CATGCGCGAGCAGGTGCAGA
Downstream 100 bases:
>100_bases CGGGCCACGAGGCCACGCCGATCGGCGGGCGCGGATTCCGGTTGACGGCCGCCGGGGGCGAGGGTAGAAGTCGCGCCCCG TCGGACGAGGGGCCGGGAAG
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSSDAAHERLPGLLLVLSAPSGAGKTTLAHRLRDASPDAVFSISATTRAPRGAEREGVDYHFVTAERFADLVAQGAFAEW AEVHGQRYGTLRATVEQALAAGKLALFDIDVQGGAQIKAAWPQQAATVLVLPPDQAELERRLRGRDTDSDETIRRRLVAA RAEVARGLGSYDYVVVNDVLEGALAQLQAIVRHERLRHAGRWDPEAARVAEACRRSAAPLGGWAS
Sequences:
>Translated_225_residues MSSDAAHERLPGLLLVLSAPSGAGKTTLAHRLRDASPDAVFSISATTRAPRGAEREGVDYHFVTAERFADLVAQGAFAEW AEVHGQRYGTLRATVEQALAAGKLALFDIDVQGGAQIKAAWPQQAATVLVLPPDQAELERRLRGRDTDSDETIRRRLVAA RAEVARGLGSYDYVVVNDVLEGALAQLQAIVRHERLRHAGRWDPEAARVAEACRRSAAPLGGWAS >Mature_224_residues SSDAAHERLPGLLLVLSAPSGAGKTTLAHRLRDASPDAVFSISATTRAPRGAEREGVDYHFVTAERFADLVAQGAFAEWA EVHGQRYGTLRATVEQALAAGKLALFDIDVQGGAQIKAAWPQQAATVLVLPPDQAELERRLRGRDTDSDETIRRRLVAAR AEVARGLGSYDYVVVNDVLEGALAQLQAIVRHERLRHAGRWDPEAARVAEACRRSAAPLGGWAS
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=183, Percent_Identity=41.5300546448087, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI4504221, Length=183, Percent_Identity=41.5300546448087, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI226874831, Length=183, Percent_Identity=41.5300546448087, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI262118259, Length=184, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI262118263, Length=184, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI262118255, Length=184, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4505237, Length=184, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI14780902, Length=204, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI38570142, Length=194, Percent_Identity=27.8350515463918, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI52630447, Length=201, Percent_Identity=30.3482587064677, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI21389483, Length=188, Percent_Identity=28.1914893617021, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1790080, Length=188, Percent_Identity=45.7446808510638, Blast_Score=160, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17508835, Length=188, Percent_Identity=35.1063829787234, Blast_Score=120, Evalue=4e-28, Organism=Caenorhabditis elegans, GI193203132, Length=188, Percent_Identity=35.1063829787234, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=40.4371584699454, Blast_Score=152, Evalue=4e-38, Organism=Drosophila melanogaster, GI21356141, Length=185, Percent_Identity=38.3783783783784, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI116007136, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI85724806, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI45554481, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI45554489, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640542, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI161077626, Length=192, Percent_Identity=30.2083333333333, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 24249; Mature: 24118
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDAAHERLPGLLLVLSAPSGAGKTTLAHRLRDASPDAVFSISATTRAPRGAEREGVDY CCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCE HFVTAERFADLVAQGAFAEWAEVHGQRYGTLRATVEQALAAGKLALFDIDVQGGAQIKAA EEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEC WPQQAATVLVLPPDQAELERRLRGRDTDSDETIRRRLVAARAEVARGLGSYDYVVVNDVL CCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH EGALAQLQAIVRHERLRHAGRWDPEAARVAEACRRSAAPLGGWAS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSDAAHERLPGLLLVLSAPSGAGKTTLAHRLRDASPDAVFSISATTRAPRGAEREGVDY CCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCE HFVTAERFADLVAQGAFAEWAEVHGQRYGTLRATVEQALAAGKLALFDIDVQGGAQIKAA EEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEC WPQQAATVLVLPPDQAELERRLRGRDTDSDETIRRRLVAARAEVARGLGSYDYVVVNDVL CCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH EGALAQLQAIVRHERLRHAGRWDPEAARVAEACRRSAAPLGGWAS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA