| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is purN [H]
Identifier: 220917802
GI number: 220917802
Start: 2983604
End: 2984281
Strand: Direct
Name: purN [H]
Synonym: A2cp1_2703
Alternate gene names: 220917802
Gene position: 2983604-2984281 (Clockwise)
Preceding gene: 220917801
Following gene: 220917803
Centisome position: 59.32
GC content: 77.29
Gene sequence:
>678_bases GTGACCCGGCTCGGCGTCCTCGCCTCGGGCGGCGGCACGAACCTCCAGGCGCTGCTCGACGCCTGCGCGGCCGGGCGCGT GGACGCGCAGGTCGCGGTGGTGCTCTCGAACGTGCCGGGCGCCGGCGCGCTGGAGCGGGCGCGCCGGGCGGGCGCGCCGG CGGAGATCCTGCCGTCGAAGGGCGTCGCCGACCGCGCCGCCTACGACCTCACGCTGGTCGAGGCGCTCCGCGCCCACCGC GTGGACCTGGTGTGCCTGGCCGGCTACATGCGGCTCGTCACGCCCGGCTTCCTCCGGGCCTTCGGGCCGGACGCCGCCAG CCGCGGCTGCCCGCGGGTGATGAACATCCACCCCGGCCTGCTCCCGTCGTTCCCCGGCCTGCACGCCGCCCGGCAGGCGC TGGAGTACGGCGCCCGCATCGCCGGCTGCACGGTCCACTTCGTGGACGAGGGCACCGACACCGGGCCGATCATCGCCCAG GCGGTGGTCCCGGTGCTGCAGGGCGACGACGAGGCGGCCCTGTCCGCCCGCATCCAGGCCGAGGAGCACCGCCTCTACCC GCAGGCGGTGCAGTGGTTCGCGCAGGGGCGCCTCTCGCTGGAGGGGCGCAGGGTCCGGCTCGATCGCTGCGCGCCGCACG GCCCGTCGCCGCTGCGGAACCCGCCGCTGGAAGGATAG
Upstream 100 bases:
>100_bases CGGCGGCGCACGCGGCGCTCCGGGCGCGCGGGCTGGAGGCGTGGACGGTCGGCGCCATCGAGGCGGGCGGGCCCGGGGAG GCCACCTGCGAGGTGGTGCG
Downstream 100 bases:
>100_bases ACCGGACCGCGCCCGGCCCTGGGCTCGATCGGCTAGGTCGTCCGAGTGGGAGCGTCCCTCGACCGCGGGACGAGATCGTT TGGCGCCCGGGCGCCCTCGA
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTRLGVLASGGGTNLQALLDACAAGRVDAQVAVVLSNVPGAGALERARRAGAPAEILPSKGVADRAAYDLTLVEALRAHR VDLVCLAGYMRLVTPGFLRAFGPDAASRGCPRVMNIHPGLLPSFPGLHAARQALEYGARIAGCTVHFVDEGTDTGPIIAQ AVVPVLQGDDEAALSARIQAEEHRLYPQAVQWFAQGRLSLEGRRVRLDRCAPHGPSPLRNPPLEG
Sequences:
>Translated_225_residues MTRLGVLASGGGTNLQALLDACAAGRVDAQVAVVLSNVPGAGALERARRAGAPAEILPSKGVADRAAYDLTLVEALRAHR VDLVCLAGYMRLVTPGFLRAFGPDAASRGCPRVMNIHPGLLPSFPGLHAARQALEYGARIAGCTVHFVDEGTDTGPIIAQ AVVPVLQGDDEAALSARIQAEEHRLYPQAVQWFAQGRLSLEGRRVRLDRCAPHGPSPLRNPPLEG >Mature_224_residues TRLGVLASGGGTNLQALLDACAAGRVDAQVAVVLSNVPGAGALERARRAGAPAEILPSKGVADRAAYDLTLVEALRAHRV DLVCLAGYMRLVTPGFLRAFGPDAASRGCPRVMNIHPGLLPSFPGLHAARQALEYGARIAGCTVHFVDEGTDTGPIIAQA VVPVLQGDDEAALSARIQAEEHRLYPQAVQWFAQGRLSLEGRRVRLDRCAPHGPSPLRNPPLEG
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=198, Percent_Identity=41.4141414141414, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI209869995, Length=198, Percent_Identity=41.4141414141414, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI209869993, Length=198, Percent_Identity=41.4141414141414, Blast_Score=162, Evalue=2e-40, Organism=Escherichia coli, GI1788846, Length=211, Percent_Identity=44.0758293838863, Blast_Score=181, Evalue=2e-47, Organism=Escherichia coli, GI1787483, Length=163, Percent_Identity=33.7423312883436, Blast_Score=90, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17567511, Length=188, Percent_Identity=41.4893617021277, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6320616, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582400, Length=196, Percent_Identity=48.9795918367347, Blast_Score=182, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 23657; Mature: 23526
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLGVLASGGGTNLQALLDACAAGRVDAQVAVVLSNVPGAGALERARRAGAPAEILPSK CCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHCCCC GVADRAAYDLTLVEALRAHRVDLVCLAGYMRLVTPGFLRAFGPDAASRGCPRVMNIHPGL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHCCCCHHCCCCCEEEECCCCC LPSFPGLHAARQALEYGARIAGCTVHFVDEGTDTGPIIAQAVVPVLQGDDEAALSARIQA CCCCCCHHHHHHHHHHCCEEECCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH EEHRLYPQAVQWFAQGRLSLEGRRVRLDRCAPHGPSPLRNPPLEG HHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRLGVLASGGGTNLQALLDACAAGRVDAQVAVVLSNVPGAGALERARRAGAPAEILPSK CCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHCCCC GVADRAAYDLTLVEALRAHRVDLVCLAGYMRLVTPGFLRAFGPDAASRGCPRVMNIHPGL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHCCCCHHCCCCCEEEECCCCC LPSFPGLHAARQALEYGARIAGCTVHFVDEGTDTGPIIAQAVVPVLQGDDEAALSARIQA CCCCCCHHHHHHHHHHCCEEECCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH EEHRLYPQAVQWFAQGRLSLEGRRVRLDRCAPHGPSPLRNPPLEG HHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]