| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is cat1 [H]
Identifier: 220917767
GI number: 220917767
Start: 2944471
End: 2946003
Strand: Direct
Name: cat1 [H]
Synonym: A2cp1_2668
Alternate gene names: 220917767
Gene position: 2944471-2946003 (Clockwise)
Preceding gene: 220917766
Following gene: 220917768
Centisome position: 58.55
GC content: 65.82
Gene sequence:
>1533_bases ATGTCGGATCGGATTCTCCACAAGGGCCTCAAGGCGAAGGTGATGTCCGCCGAAGAAGCCGCCGGGCTCATCCCCAACGG CGCCATCCTCGGCATGTCGGGCTTCACCGGCGCCGGCTATCCCAAGGCCGTCCCCATCGCGCTCTCCAAGCGCGCGATCG AGGAGCGGATGAAGGGCAAGCCCTTCAAGATCACCGCCCTCACCGGCGCGTCGACGGGCCCCGAGCTCGACCAGGCCATG GGCCTGACGGAGTCGGTCAGCTTCCGCTTCCCGTACAACGGCGACGCGGTCATGCGGCAGAAGATCAACGAGGGCGTGAT CGAGTACCAGGACATGCACCTGAGCCACGCCGGCTCGCTGGTGCGCTACGGGTACTACGGGCGCCCCGACAACAAGATCG ACTTCGCCGTCATCGAGGTCACGAAGATCAAGGAGGACGGCTCGCTCGTCTTCTCGTCCTCGTGCGGCGCGAACACCGCG TACTTCGACGTCGCGGAGAAGTACATCCTCGAGGTCAACGAGTGGCAGGACGAGCGGATGGAGGGGATGCACGACATCCT CGGCGTGACCGGCCGTCACGGTGAGCGGACGCCGATCCCGATCCTCCGCGCCGACGACCGCGTCGGGTCGCCCACGCTGA AGATCGACGTGTCGAAGGTCGCGGCGGTGGTGGTCACGAACAACCCCGACCGCAACGCGCCGTTCAAGGCCCCCGAGGCC GATCACAAGCGGATCGCCCAGCACATCCTCGACTTCCTCGACGGCGAGGTGAAGGCCGGCCGGCTCCCGAAGAGCCTCAC CCCGCTGCAGTCGGGCGTCGGGAACATCGCGAACGCGGTGCTCGTCGGCCTGAACGAGGGGCACTTCGAGAACATGATGA GCTACACCGAGGTGATCCAGGACGGCATGCTGGACCTCCTCGACTCCGGCAAGCTCAAGATCGCGTCCGCGACGGCGTTC TCGGTCTCGCCCGAGGGCCAGGAGCGGTTCAACAAGAACATCGACCGCTACCGCAAGCAGATCATCCTGCGCCCGCAGGA CGTGTCGAACCACCCCGAGGTCATCCGGCGCCTCGGCTGCATCGCGATGAACGGGTTCGTCGAGGCCGACATCTACGGCC ACGTGAACTCGACCCACATCGTGGGCAAGGGCATCGAGAACGGCATCGGCGGGTCGGGCGACTTCGCCCGCAACTCGGCG TACACGATCTTCATGTCCCCGTCGGTCGCGAAGGGCGGGAAGATCTCGGCCATCGTCCCGTTCGCGTCGCACATCGACCA CACGGAGCACGAGGTCAACGGCATCGTGACCGAGTACGGCTTCGCCGACCTGCGCGGGAAGAGCCCGAAGCAGAAGGCGA AGGAAGTCATCGAGAAGTGCGCGCACCCGGACTGGCGCCCGATCCTCTGGGACTACTACAACCGCTCGCTGAAGGGCGGC AGCTTCGGGAAGCACACGCCGCACATGCTCAAGGAGGCGTTCTCGTTCCACACGCGCTACCTCGAGACGGGCGACATGCG CCCGAAGAAGTAG
Upstream 100 bases:
>100_bases CTCGCGTTACTCTGCGCCACCCACAGCAGGTGTGTCGCAGCACTCTCGGTCGTACCCGCGCTTTCCGTGACAAGCAGCAG GAACCTAGGAGGCTGAACGC
Downstream 100 bases:
>100_bases CCGGCCTCCGAGAGACCGTCGCAGCCGCGGCGGCCGTCCTCCCGGGCGGCCGCCGTTCCATTTTCCGGCGGCGCCTCGCC GCCGCCGCGCTAGGCTCCCG
Product: succinate CoA transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MSDRILHKGLKAKVMSAEEAAGLIPNGAILGMSGFTGAGYPKAVPIALSKRAIEERMKGKPFKITALTGASTGPELDQAM GLTESVSFRFPYNGDAVMRQKINEGVIEYQDMHLSHAGSLVRYGYYGRPDNKIDFAVIEVTKIKEDGSLVFSSSCGANTA YFDVAEKYILEVNEWQDERMEGMHDILGVTGRHGERTPIPILRADDRVGSPTLKIDVSKVAAVVVTNNPDRNAPFKAPEA DHKRIAQHILDFLDGEVKAGRLPKSLTPLQSGVGNIANAVLVGLNEGHFENMMSYTEVIQDGMLDLLDSGKLKIASATAF SVSPEGQERFNKNIDRYRKQIILRPQDVSNHPEVIRRLGCIAMNGFVEADIYGHVNSTHIVGKGIENGIGGSGDFARNSA YTIFMSPSVAKGGKISAIVPFASHIDHTEHEVNGIVTEYGFADLRGKSPKQKAKEVIEKCAHPDWRPILWDYYNRSLKGG SFGKHTPHMLKEAFSFHTRYLETGDMRPKK
Sequences:
>Translated_510_residues MSDRILHKGLKAKVMSAEEAAGLIPNGAILGMSGFTGAGYPKAVPIALSKRAIEERMKGKPFKITALTGASTGPELDQAM GLTESVSFRFPYNGDAVMRQKINEGVIEYQDMHLSHAGSLVRYGYYGRPDNKIDFAVIEVTKIKEDGSLVFSSSCGANTA YFDVAEKYILEVNEWQDERMEGMHDILGVTGRHGERTPIPILRADDRVGSPTLKIDVSKVAAVVVTNNPDRNAPFKAPEA DHKRIAQHILDFLDGEVKAGRLPKSLTPLQSGVGNIANAVLVGLNEGHFENMMSYTEVIQDGMLDLLDSGKLKIASATAF SVSPEGQERFNKNIDRYRKQIILRPQDVSNHPEVIRRLGCIAMNGFVEADIYGHVNSTHIVGKGIENGIGGSGDFARNSA YTIFMSPSVAKGGKISAIVPFASHIDHTEHEVNGIVTEYGFADLRGKSPKQKAKEVIEKCAHPDWRPILWDYYNRSLKGG SFGKHTPHMLKEAFSFHTRYLETGDMRPKK >Mature_509_residues SDRILHKGLKAKVMSAEEAAGLIPNGAILGMSGFTGAGYPKAVPIALSKRAIEERMKGKPFKITALTGASTGPELDQAMG LTESVSFRFPYNGDAVMRQKINEGVIEYQDMHLSHAGSLVRYGYYGRPDNKIDFAVIEVTKIKEDGSLVFSSSCGANTAY FDVAEKYILEVNEWQDERMEGMHDILGVTGRHGERTPIPILRADDRVGSPTLKIDVSKVAAVVVTNNPDRNAPFKAPEAD HKRIAQHILDFLDGEVKAGRLPKSLTPLQSGVGNIANAVLVGLNEGHFENMMSYTEVIQDGMLDLLDSGKLKIASATAFS VSPEGQERFNKNIDRYRKQIILRPQDVSNHPEVIRRLGCIAMNGFVEADIYGHVNSTHIVGKGIENGIGGSGDFARNSAY TIFMSPSVAKGGKISAIVPFASHIDHTEHEVNGIVTEYGFADLRGKSPKQKAKEVIEKCAHPDWRPILWDYYNRSLKGGS FGKHTPHMLKEAFSFHTRYLETGDMRPKK
Specific function: Forms succinyl-CoA from succinate and acetyl-CoA [H]
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=493, Percent_Identity=43.0020283975659, Blast_Score=408, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17538151, Length=494, Percent_Identity=26.1133603238866, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI32563853, Length=234, Percent_Identity=31.6239316239316, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319456, Length=521, Percent_Identity=43.3781190019194, Blast_Score=389, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 - InterPro: IPR006472 - InterPro: IPR017821 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro; PF04223 CitF [H]
EC number: NA
Molecular weight: Translated: 56000; Mature: 55868
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRILHKGLKAKVMSAEEAAGLIPNGAILGMSGFTGAGYPKAVPIALSKRAIEERMKGK CCCHHHHHCCHHHHHCHHHHCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCC PFKITALTGASTGPELDQAMGLTESVSFRFPYNGDAVMRQKINEGVIEYQDMHLSHAGSL CEEEEEEECCCCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCE VRYGYYGRPDNKIDFAVIEVTKIKEDGSLVFSSSCGANTAYFDVAEKYILEVNEWQDERM EECCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHH EGMHDILGVTGRHGERTPIPILRADDRVGSPTLKIDVSKVAAVVVTNNPDRNAPFKAPEA HHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEHHHEEEEEEECCCCCCCCCCCCCH DHKRIAQHILDFLDGEVKAGRLPKSLTPLQSGVGNIANAVLVGLNEGHFENMMSYTEVIQ HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH DGMLDLLDSGKLKIASATAFSVSPEGQERFNKNIDRYRKQIILRPQDVSNHPEVIRRLGC HHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHH IAMNGFVEADIYGHVNSTHIVGKGIENGIGGSGDFARNSAYTIFMSPSVAKGGKISAIVP HHCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC FASHIDHTEHEVNGIVTEYGFADLRGKSPKQKAKEVIEKCAHPDWRPILWDYYNRSLKGG HHHHCCCHHHHHHCEEECCCCHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC SFGKHTPHMLKEAFSFHTRYLETGDMRPKK CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDRILHKGLKAKVMSAEEAAGLIPNGAILGMSGFTGAGYPKAVPIALSKRAIEERMKGK CCHHHHHCCHHHHHCHHHHCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCC PFKITALTGASTGPELDQAMGLTESVSFRFPYNGDAVMRQKINEGVIEYQDMHLSHAGSL CEEEEEEECCCCCCCHHHHCCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCE VRYGYYGRPDNKIDFAVIEVTKIKEDGSLVFSSSCGANTAYFDVAEKYILEVNEWQDERM EECCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHH EGMHDILGVTGRHGERTPIPILRADDRVGSPTLKIDVSKVAAVVVTNNPDRNAPFKAPEA HHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEHHHEEEEEEECCCCCCCCCCCCCH DHKRIAQHILDFLDGEVKAGRLPKSLTPLQSGVGNIANAVLVGLNEGHFENMMSYTEVIQ HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH DGMLDLLDSGKLKIASATAFSVSPEGQERFNKNIDRYRKQIILRPQDVSNHPEVIRRLGC HHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHH IAMNGFVEADIYGHVNSTHIVGKGIENGIGGSGDFARNSAYTIFMSPSVAKGGKISAIVP HHCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC FASHIDHTEHEVNGIVTEYGFADLRGKSPKQKAKEVIEKCAHPDWRPILWDYYNRSLKGG HHHHCCCHHHHHHCEEECCCCHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC SFGKHTPHMLKEAFSFHTRYLETGDMRPKK CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]