| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is plsB [H]
Identifier: 220917766
GI number: 220917766
Start: 2941738
End: 2944338
Strand: Direct
Name: plsB [H]
Synonym: A2cp1_2667
Alternate gene names: 220917766
Gene position: 2941738-2944338 (Clockwise)
Preceding gene: 220917765
Following gene: 220917767
Centisome position: 58.49
GC content: 75.51
Gene sequence:
>2601_bases GTGACGAAGGCCTCGGATCCCCAGCCGGACGGCTCGACGCCGCCGCCGTCCGCGCCTGAGGGCACCGGGCTCGGCGAGGG CGGCGGCGTGCTGGGGCGGTGGTTCGCGCCGGTCAAGATCCCCCGCGACGCGATCGCCACGCTGCGCGCGCTCGCCGCGC GCGGCAGCCTGGTGTTCGTGATGCGCTCGCCGGGCCTGCTCGGCTTCCTGTACCTGCGCTGGTTCCTGCGCCGCGCCGGC CTGCCCCCGCTCCGCGCGGCGCAGGGCTTCCACGGCCTCACCGGCTGGCTCGCCCGGGTGCGGCGCACCCGCCGCGCGTT CGAGGACGCGGTCGCCGCCGGCGAGTCGAGCCTCGTGTTCCTCGGGCGCCCGGACGCCGAGAAGAACCCGCTCGCCGCGC TGGTGCGGCAGCAGCGGGACTTGTTCCAGCCGGTGTTCCTCGTCCCGGTGCTGCTGGTGTGGAGCCGGCGGGCGCAGCGG CTGCAGGGCTCGATCTGGGACGTGCTGTACGGCTCGCCCGAGTCGCCGAGCGCCTTCGCGAACGCGATCGCGTTCCTGCG CGCGTTCCGGCGGGCGGTCTTCGACGTGGGGCGCGCGCTCGACCTCAAGGAGTACCTGGCCCAGCGCGCCGCCGAGCCGG ACGCCTCGGTGGCCCTGCGCGTGCGCGGCGCGCTCCACCAGCACCTCGCCCGCGAGTTCCGCACCGCGGTCGGCCCGCCG CTCAAGGCGCCGTCCCGGGTGCGCGAGAAGGTGCTGCGCGATCGCTCGCTGCGCGCCGCCATCGAGGCGGTCGCCGCCGG GACCGGCCGGCCCGCGCAGGCGGTGGTGGCCGAGGCCGAGAAGGACCTGCGCGAGATCGCGAGCAACTACGACCCGGTCT TCGTCGGGGTGATGCGGGCGCTGCTCTCGCGGTTCTTCCGGCGGCTCTACACCAGCGTGGAGGTGGACGAGGAGGGCCTG GCCCGGCTGCGCCGCGCGGCGGGCGAGGCGCCCTTCGTGCTGTGCCCCAGCCACAAGAGCCACGTGGACTACCTGGTCCT CTCCTGGCTCCTCTACGAGAACGGCATGACGCCGCCGCACATCGCGGCCGGCATCAACCTCGCGTTCTGGCCGTTCGGCG CGATCGCCCGCCGCGGCGGCGCGTTCTTCATCCGGCGCAAGGTGAAGGGCGACCGCGTCTACACCGCGGTGCTGCGCGCC TACGTGAAGCACCTGCTGCGCGACCGCTTCCCGCAGGAGTTCTACGTGGAGGGCGGGCGCAGCCGCACCGGCAAGCTCCT GTTCCCGAAGACCGGCCTGGTGTCGATGGAGGTGGACGCCTGGCTGGACGGCGCCGCCGACGACGTGCTGTTCGTGCCGG TGGCGATCGACTACGAGCGGCTCATCGAGGCGTCCAGCTACGCGAACGAGCTGGCGGGCGGCGAGAAGCGCAAGGAGAGC CTGCGCGGCCTGCTGGGCGCGGCCCGCGTGCTCCTGCGGCGGTACGAGCGGCTGTACGTCCAGTTCGAGACGCCCATCTC GCTGCGCCAGGTGGCGGCCGAGCGGCTGGGGGCGCGCGCGGCGTCGCTGGCGGTGGACGAGGCCTGGGGCGGCGAGGCGG AGCGGCGCGCCGCGCCCGGCGCCGCCGGGGCGGGCGACGACGCCGAGGCGAAGCGGCAGCTGGTGCAGGGGCTCGCGAAC CGCATCGCCTACGGGATCAGCCGCGCCGTCACCATCACGCCGGTCGGGCTGGTGGCGGCGGCGCTCCTCTCGCACGTGCG GCGCGGCCTCGGGTCCGAGGAGGTGGCGCGGCGGGTCGAGCTGCTCCGCTACGTGGCCGCCGAGGGCGGGGCCCGCTTCG CGCGCGACCTCGCCGGCGCGCCCTCCGATCCGCGGCAGGCCGGGCCCATCGCAGACGCGGTGCGGCGCCTGGCGCGCGAC GGGCTGGTGCGGGTGGAGGTCGCGGCGGGCGACACCATCTACCAGGTGGTCGACGAGAAGCGCCCCCTGCTCGACTACCA CCGCAACGCGGTGATCCACCGCTACGTCGCGCCCGCGCTGGTGGCCTCGGCGGCGCGCGCCGGCGGGACGGGCGGCTCGA CGGCGGCGGAGGTCCGCGATCGGGCGCTGTGGCTGTCCCGCCTGTTCAAGCTCGAGTTCATGTACCGGAGCGGCGCGAGC TTCGACGAGATCTTCGAGTCGAACCTCGCGTTCCTGGTGCGGGTGCGGGCGGTGGACTGCGACGCGGGCCGGGTGCTGCC CGGACCGGAGACCACCGCCCTCGCCTTCCTCGCCGACCTGGTCCGCGCGTACCTCGAGGCCTACCACCTCGCCGCCGCGG CCGCCCTCGCCGCCCTCGGGTCCGACGCGCCGCGGCAGGCGCCGCTCGACCGGCGGGCGCTGGTCCGGGAGGCGCTCGAG CGAGGCCGGGGCGAGTTCCTCTCCGGCCGGATCGCGCTCCGCGAGACGCTCTCCAAAGCCACGCTGGAGAACGCGGTGGA GTGGCTCATGGCGCAGCGCGTGATCGCCGAGGAGGCGGGCAAGCTGCGCCTCGCCAGCCCGGCCTCGGTCGCGGAACTCC GCGCCATCATGGACGGAATCGCTCCGCATCTGGCGATGTGA
Upstream 100 bases:
>100_bases AAGCGCGGGTGACCGCGGACCCGCTCTCCGGCCCGCAGGCCAGGGATTTCCGGGCGGAATCCGCCCGCCAGCCGCCACCG CTGTAATACACTCGCGCGCC
Downstream 100 bases:
>100_bases GAAGCGTTCCGCCCCTTCCCCACGGGGCCGCGCTCGCGTTACTCTGCGCCACCCACAGCAGGTGTGTCGCAGCACTCTCG GTCGTACCCGCGCTTTCCGT
Product: glycerol-3-phosphate O-acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 866; Mature: 865
Protein sequence:
>866_residues MTKASDPQPDGSTPPPSAPEGTGLGEGGGVLGRWFAPVKIPRDAIATLRALAARGSLVFVMRSPGLLGFLYLRWFLRRAG LPPLRAAQGFHGLTGWLARVRRTRRAFEDAVAAGESSLVFLGRPDAEKNPLAALVRQQRDLFQPVFLVPVLLVWSRRAQR LQGSIWDVLYGSPESPSAFANAIAFLRAFRRAVFDVGRALDLKEYLAQRAAEPDASVALRVRGALHQHLAREFRTAVGPP LKAPSRVREKVLRDRSLRAAIEAVAAGTGRPAQAVVAEAEKDLREIASNYDPVFVGVMRALLSRFFRRLYTSVEVDEEGL ARLRRAAGEAPFVLCPSHKSHVDYLVLSWLLYENGMTPPHIAAGINLAFWPFGAIARRGGAFFIRRKVKGDRVYTAVLRA YVKHLLRDRFPQEFYVEGGRSRTGKLLFPKTGLVSMEVDAWLDGAADDVLFVPVAIDYERLIEASSYANELAGGEKRKES LRGLLGAARVLLRRYERLYVQFETPISLRQVAAERLGARAASLAVDEAWGGEAERRAAPGAAGAGDDAEAKRQLVQGLAN RIAYGISRAVTITPVGLVAAALLSHVRRGLGSEEVARRVELLRYVAAEGGARFARDLAGAPSDPRQAGPIADAVRRLARD GLVRVEVAAGDTIYQVVDEKRPLLDYHRNAVIHRYVAPALVASAARAGGTGGSTAAEVRDRALWLSRLFKLEFMYRSGAS FDEIFESNLAFLVRVRAVDCDAGRVLPGPETTALAFLADLVRAYLEAYHLAAAAALAALGSDAPRQAPLDRRALVREALE RGRGEFLSGRIALRETLSKATLENAVEWLMAQRVIAEEAGKLRLASPASVAELRAIMDGIAPHLAM
Sequences:
>Translated_866_residues MTKASDPQPDGSTPPPSAPEGTGLGEGGGVLGRWFAPVKIPRDAIATLRALAARGSLVFVMRSPGLLGFLYLRWFLRRAG LPPLRAAQGFHGLTGWLARVRRTRRAFEDAVAAGESSLVFLGRPDAEKNPLAALVRQQRDLFQPVFLVPVLLVWSRRAQR LQGSIWDVLYGSPESPSAFANAIAFLRAFRRAVFDVGRALDLKEYLAQRAAEPDASVALRVRGALHQHLAREFRTAVGPP LKAPSRVREKVLRDRSLRAAIEAVAAGTGRPAQAVVAEAEKDLREIASNYDPVFVGVMRALLSRFFRRLYTSVEVDEEGL ARLRRAAGEAPFVLCPSHKSHVDYLVLSWLLYENGMTPPHIAAGINLAFWPFGAIARRGGAFFIRRKVKGDRVYTAVLRA YVKHLLRDRFPQEFYVEGGRSRTGKLLFPKTGLVSMEVDAWLDGAADDVLFVPVAIDYERLIEASSYANELAGGEKRKES LRGLLGAARVLLRRYERLYVQFETPISLRQVAAERLGARAASLAVDEAWGGEAERRAAPGAAGAGDDAEAKRQLVQGLAN RIAYGISRAVTITPVGLVAAALLSHVRRGLGSEEVARRVELLRYVAAEGGARFARDLAGAPSDPRQAGPIADAVRRLARD GLVRVEVAAGDTIYQVVDEKRPLLDYHRNAVIHRYVAPALVASAARAGGTGGSTAAEVRDRALWLSRLFKLEFMYRSGAS FDEIFESNLAFLVRVRAVDCDAGRVLPGPETTALAFLADLVRAYLEAYHLAAAAALAALGSDAPRQAPLDRRALVREALE RGRGEFLSGRIALRETLSKATLENAVEWLMAQRVIAEEAGKLRLASPASVAELRAIMDGIAPHLAM >Mature_865_residues TKASDPQPDGSTPPPSAPEGTGLGEGGGVLGRWFAPVKIPRDAIATLRALAARGSLVFVMRSPGLLGFLYLRWFLRRAGL PPLRAAQGFHGLTGWLARVRRTRRAFEDAVAAGESSLVFLGRPDAEKNPLAALVRQQRDLFQPVFLVPVLLVWSRRAQRL QGSIWDVLYGSPESPSAFANAIAFLRAFRRAVFDVGRALDLKEYLAQRAAEPDASVALRVRGALHQHLAREFRTAVGPPL KAPSRVREKVLRDRSLRAAIEAVAAGTGRPAQAVVAEAEKDLREIASNYDPVFVGVMRALLSRFFRRLYTSVEVDEEGLA RLRRAAGEAPFVLCPSHKSHVDYLVLSWLLYENGMTPPHIAAGINLAFWPFGAIARRGGAFFIRRKVKGDRVYTAVLRAY VKHLLRDRFPQEFYVEGGRSRTGKLLFPKTGLVSMEVDAWLDGAADDVLFVPVAIDYERLIEASSYANELAGGEKRKESL RGLLGAARVLLRRYERLYVQFETPISLRQVAAERLGARAASLAVDEAWGGEAERRAAPGAAGAGDDAEAKRQLVQGLANR IAYGISRAVTITPVGLVAAALLSHVRRGLGSEEVARRVELLRYVAAEGGARFARDLAGAPSDPRQAGPIADAVRRLARDG LVRVEVAAGDTIYQVVDEKRPLLDYHRNAVIHRYVAPALVASAARAGGTGGSTAAEVRDRALWLSRLFKLEFMYRSGASF DEIFESNLAFLVRVRAVDCDAGRVLPGPETTALAFLADLVRAYLEAYHLAAAAALAALGSDAPRQAPLDRRALVREALER GRGEFLSGRIALRETLSKATLENAVEWLMAQRVIAEEAGKLRLASPASVAELRAIMDGIAPHLAM
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=551, Percent_Identity=28.8566243194192, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI190358539, Length=490, Percent_Identity=26.530612244898, Blast_Score=159, Evalue=1e-38, Organism=Escherichia coli, GI87082362, Length=476, Percent_Identity=32.3529411764706, Blast_Score=214, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71988723, Length=627, Percent_Identity=25.9968102073365, Blast_Score=166, Evalue=6e-41, Organism=Caenorhabditis elegans, GI71988728, Length=579, Percent_Identity=26.0794473229706, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25147672, Length=510, Percent_Identity=26.078431372549, Blast_Score=153, Evalue=4e-37, Organism=Drosophila melanogaster, GI17864692, Length=555, Percent_Identity=26.3063063063063, Blast_Score=183, Evalue=6e-46, Organism=Drosophila melanogaster, GI24650754, Length=317, Percent_Identity=29.6529968454259, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI21357731, Length=317, Percent_Identity=29.6529968454259, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24650752, Length=317, Percent_Identity=29.6529968454259, Blast_Score=157, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 94291; Mature: 94159
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS00265 PANCREATIC_HORMONE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKASDPQPDGSTPPPSAPEGTGLGEGGGVLGRWFAPVKIPRDAIATLRALAARGSLVFV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE MRSPGLLGFLYLRWFLRRAGLPPLRAAQGFHGLTGWLARVRRTRRAFEDAVAAGESSLVF EECCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LGRPDAEKNPLAALVRQQRDLFQPVFLVPVLLVWSRRAQRLQGSIWDVLYGSPESPSAFA EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHH NAIAFLRAFRRAVFDVGRALDLKEYLAQRAAEPDASVALRVRGALHQHLAREFRTAVGPP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LKAPSRVREKVLRDRSLRAAIEAVAAGTGRPAQAVVAEAEKDLREIASNYDPVFVGVMRA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLSRFFRRLYTSVEVDEEGLARLRRAAGEAPFVLCPSHKSHVDYLVLSWLLYENGMTPPH HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCH IAAGINLAFWPFGAIARRGGAFFIRRKVKGDRVYTAVLRAYVKHLLRDRFPQEFYVEGGR HHHCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCC SRTGKLLFPKTGLVSMEVDAWLDGAADDVLFVPVAIDYERLIEASSYANELAGGEKRKES CCCCCEECCCCCCEEEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHH LRGLLGAARVLLRRYERLYVQFETPISLRQVAAERLGARAASLAVDEAWGGEAERRAAPG HHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCCCC AAGAGDDAEAKRQLVQGLANRIAYGISRAVTITPVGLVAAALLSHVRRGLGSEEVARRVE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH LLRYVAAEGGARFARDLAGAPSDPRQAGPIADAVRRLARDGLVRVEVAAGDTIYQVVDEK HHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHCC RPLLDYHRNAVIHRYVAPALVASAARAGGTGGSTAAEVRDRALWLSRLFKLEFMYRSGAS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC FDEIFESNLAFLVRVRAVDCDAGRVLPGPETTALAFLADLVRAYLEAYHLAAAAALAALG HHHHHHCCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SDAPRQAPLDRRALVREALERGRGEFLSGRIALRETLSKATLENAVEWLMAQRVIAEEAG CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KLRLASPASVAELRAIMDGIAPHLAM CEEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKASDPQPDGSTPPPSAPEGTGLGEGGGVLGRWFAPVKIPRDAIATLRALAARGSLVFV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE MRSPGLLGFLYLRWFLRRAGLPPLRAAQGFHGLTGWLARVRRTRRAFEDAVAAGESSLVF EECCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LGRPDAEKNPLAALVRQQRDLFQPVFLVPVLLVWSRRAQRLQGSIWDVLYGSPESPSAFA EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHH NAIAFLRAFRRAVFDVGRALDLKEYLAQRAAEPDASVALRVRGALHQHLAREFRTAVGPP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LKAPSRVREKVLRDRSLRAAIEAVAAGTGRPAQAVVAEAEKDLREIASNYDPVFVGVMRA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLSRFFRRLYTSVEVDEEGLARLRRAAGEAPFVLCPSHKSHVDYLVLSWLLYENGMTPPH HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCH IAAGINLAFWPFGAIARRGGAFFIRRKVKGDRVYTAVLRAYVKHLLRDRFPQEFYVEGGR HHHCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCC SRTGKLLFPKTGLVSMEVDAWLDGAADDVLFVPVAIDYERLIEASSYANELAGGEKRKES CCCCCEECCCCCCEEEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHH LRGLLGAARVLLRRYERLYVQFETPISLRQVAAERLGARAASLAVDEAWGGEAERRAAPG HHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCCCC AAGAGDDAEAKRQLVQGLANRIAYGISRAVTITPVGLVAAALLSHVRRGLGSEEVARRVE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH LLRYVAAEGGARFARDLAGAPSDPRQAGPIADAVRRLARDGLVRVEVAAGDTIYQVVDEK HHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHCC RPLLDYHRNAVIHRYVAPALVASAARAGGTGGSTAAEVRDRALWLSRLFKLEFMYRSGAS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC FDEIFESNLAFLVRVRAVDCDAGRVLPGPETTALAFLADLVRAYLEAYHLAAAAALAALG HHHHHHCCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SDAPRQAPLDRRALVREALERGRGEFLSGRIALRETLSKATLENAVEWLMAQRVIAEEAG CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KLRLASPASVAELRAIMDGIAPHLAM CEEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA