| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is yciM [C]
Identifier: 220917532
GI number: 220917532
Start: 2690167
End: 2691276
Strand: Reverse
Name: yciM [C]
Synonym: A2cp1_2432
Alternate gene names: 220917532
Gene position: 2691276-2690167 (Counterclockwise)
Preceding gene: 220917533
Following gene: 220917531
Centisome position: 53.51
GC content: 80.99
Gene sequence:
>1110_bases GTGACGCAGCTCTGGCTCGCGCTCGCCGCCGGCTCGCTCGCCGCGATCGTGGCGATCCTGCTCGCGGAGCGCCTGCGCCG GCGCCGCGACGAGGCGCAGGCCTACCTGAAGGGCGTCCGCTCCATCGTGCAGGGCGACCCGGACGCCGCCATCGAGGCGC TCTCCGACGCCGCGCGCCTGGGCACGCCCGAGGCGGTGGACACCTACCTGGCGCTGGGCGCGCTGTTCCGGCGCGAGGGC GACCTCGCCCGTGCGGTGCGCCTGCACCGGAACATGCTGCTCGGCCGCGGGCTCGACCCGGCGCGGCGCGCCGAGGTGGA GCGCGAGCTGGCCGAGGACTACCGGCGGAGCGGCATGCTCGCCGAGGCCGCCGAGCTGTACGCCCGGCTGGCGGAGGGCG ACGGGGATCGCGCCGCGGCCGAGGGGCTGCGCGACGTGAGGGTCGAGCAGGGCGACCTGGCGGGCGCGGTGGCGCTGCAG CGGCGCCTCGGCCCGGGCGACGGAGACCCGGTGCTGGCGCACCTGCTCGCGGCGCAGGCGCGCGAGGCGCTGCGCGGCGA CCCGGCGCAGGCGGCGGCGCTCGCGCGAGAGGGGCTGGCGGCGCACCCGCGCAGCGCGGACGCCTGGATGGCGCTCGCCG AGGCGGAGGCCGCCGCGGGCGCGACCGCCGCAGCCCTGGACGCTGCGGGCCGCTCGCTCGAGGAGGACCCGCGCGCCGCG CTGCTGGCGTGGCCGGCGCTCGCCGCGGTGCCGGACGCCGCGGCGGCCGAGGCGTTCGCGGCGGCCCGCGCGGCCGCGCG CCCGGACGACCCGGCCCTGCACCTGCTGCACGGCCGCGCGCTGCACCGCTGCGCGCGGAACCCGGAGGCGGTGGCGGCGC TGCGCCTGGCGCTGGAGCGCGACCGGGTGGGCGAGGTGTCGCTGGCGATGCGGGAGCTGCTGCACCAGGCCGCCGCGCCG GGCCCGGACGACCTCGCCGCCCGCCACGACCTGCTGGTCGCGGCGCTGCTCCGCCGCGGCAAGGCCCCGCGCTGCGAGCG CTGCGGCTCCGACGCACCGTCGCGCGCGTGGCGGTGCCGCCGCTGCGGCGCGTTCGACGCCTATCCCTGA
Upstream 100 bases:
>100_bases ACAACAACTTCATGCCGGTGCTGGCCGACAACCGCGTGGTCGTGGAGGCGCTCGACGAGGCCTGGCAGCGGCTGCACGCC GGGTTCGCCGCGCTGGGCCC
Downstream 100 bases:
>100_bases GCAAGCTCCGGCCCGCGCGCGGCCCGGCGCTTGCTTCCGGCGCGCGCCCCCGGTAGAGAGACCCCTTCCTATGGTCCGTG ATCGCGTCATCGAACTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTQLWLALAAGSLAAIVAILLAERLRRRRDEAQAYLKGVRSIVQGDPDAAIEALSDAARLGTPEAVDTYLALGALFRREG DLARAVRLHRNMLLGRGLDPARRAEVERELAEDYRRSGMLAEAAELYARLAEGDGDRAAAEGLRDVRVEQGDLAGAVALQ RRLGPGDGDPVLAHLLAAQAREALRGDPAQAAALAREGLAAHPRSADAWMALAEAEAAAGATAAALDAAGRSLEEDPRAA LLAWPALAAVPDAAAAEAFAAARAAARPDDPALHLLHGRALHRCARNPEAVAALRLALERDRVGEVSLAMRELLHQAAAP GPDDLAARHDLLVAALLRRGKAPRCERCGSDAPSRAWRCRRCGAFDAYP
Sequences:
>Translated_369_residues MTQLWLALAAGSLAAIVAILLAERLRRRRDEAQAYLKGVRSIVQGDPDAAIEALSDAARLGTPEAVDTYLALGALFRREG DLARAVRLHRNMLLGRGLDPARRAEVERELAEDYRRSGMLAEAAELYARLAEGDGDRAAAEGLRDVRVEQGDLAGAVALQ RRLGPGDGDPVLAHLLAAQAREALRGDPAQAAALAREGLAAHPRSADAWMALAEAEAAAGATAAALDAAGRSLEEDPRAA LLAWPALAAVPDAAAAEAFAAARAAARPDDPALHLLHGRALHRCARNPEAVAALRLALERDRVGEVSLAMRELLHQAAAP GPDDLAARHDLLVAALLRRGKAPRCERCGSDAPSRAWRCRRCGAFDAYP >Mature_368_residues TQLWLALAAGSLAAIVAILLAERLRRRRDEAQAYLKGVRSIVQGDPDAAIEALSDAARLGTPEAVDTYLALGALFRREGD LARAVRLHRNMLLGRGLDPARRAEVERELAEDYRRSGMLAEAAELYARLAEGDGDRAAAEGLRDVRVEQGDLAGAVALQR RLGPGDGDPVLAHLLAAQAREALRGDPAQAAALAREGLAAHPRSADAWMALAEAEAAAGATAAALDAAGRSLEEDPRAAL LAWPALAAVPDAAAAEAFAAARAAARPDDPALHLLHGRALHRCARNPEAVAALRLALERDRVGEVSLAMRELLHQAAAPG PDDLAARHDLLVAALLRRGKAPRCERCGSDAPSRAWRCRRCGAFDAYP
Specific function: Unknown
COG id: COG2956
COG function: function code G; Predicted N-acetylglucosaminyl transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367116, Length=356, Percent_Identity=23.0337078651685, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38998; Mature: 38866
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLWLALAAGSLAAIVAILLAERLRRRRDEAQAYLKGVRSIVQGDPDAAIEALSDAARL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GTPEAVDTYLALGALFRREGDLARAVRLHRNMLLGRGLDPARRAEVERELAEDYRRSGML CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHH AEAAELYARLAEGDGDRAAAEGLRDVRVEQGDLAGAVALQRRLGPGDGDPVLAHLLAAQA HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH REALRGDPAQAAALAREGLAAHPRSADAWMALAEAEAAAGATAAALDAAGRSLEEDPRAA HHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHH LLAWPALAAVPDAAAAEAFAAARAAARPDDPALHLLHGRALHRCARNPEAVAALRLALER HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DRVGEVSLAMRELLHQAAAPGPDDLAARHDLLVAALLRRGKAPRCERCGSDAPSRAWRCR HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHH RCGAFDAYP HCCCCCCCC >Mature Secondary Structure TQLWLALAAGSLAAIVAILLAERLRRRRDEAQAYLKGVRSIVQGDPDAAIEALSDAARL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GTPEAVDTYLALGALFRREGDLARAVRLHRNMLLGRGLDPARRAEVERELAEDYRRSGML CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHH AEAAELYARLAEGDGDRAAAEGLRDVRVEQGDLAGAVALQRRLGPGDGDPVLAHLLAAQA HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH REALRGDPAQAAALAREGLAAHPRSADAWMALAEAEAAAGATAAALDAAGRSLEEDPRAA HHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHH LLAWPALAAVPDAAAAEAFAAARAAARPDDPALHLLHGRALHRCARNPEAVAALRLALER HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DRVGEVSLAMRELLHQAAAPGPDDLAARHDLLVAALLRRGKAPRCERCGSDAPSRAWRCR HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHH RCGAFDAYP HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA