| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is hemA1 [H]
Identifier: 220917073
GI number: 220917073
Start: 2222809
End: 2224077
Strand: Direct
Name: hemA1 [H]
Synonym: A2cp1_1969
Alternate gene names: 220917073
Gene position: 2222809-2224077 (Clockwise)
Preceding gene: 220917070
Following gene: 220917074
Centisome position: 44.2
GC content: 76.75
Gene sequence:
>1269_bases GTGCTCGTCGCAGTCGGGCTGAACCAGAAGGGCGCCACCGTCGCAGACCGCGAGGTCCTCGCGCTGCCGTCGGAGGAGCT GCTGGACGCGCTCACCGCCTTCCAGGCGCTCGACGGCGTGGACGAGGTCGCGATCGTCTCCACCTGCTACCGCGTGGAGA TCTTCGCGGCCGCCCGCTGCCCCGCCGCCGCGGAGCTGTCGCTGCGCCACGCGATGGAGGCGCGCGCCGGCCGCCCGCTC CCGCTGTTCGAGCTCCAGGGCGAGGAGGCGTTCCGGCACCTCGTCCGCGTCGCCTCCAGCCTCGAGTCCGCCATCCTGGG CGAGCCGCAGATCCTGGGCCAGGTGAAGGACGCGTTCCACCGCGCCGCCGAGGCGGGCGCCGCCGGCAAGGAGCTCGCCT CGGTGCTCTCCCGCGCGCTCGCGGCCGCGAAGCGCGTCCGCACCGAGACGGCGGTGGGCCGCGCCGGCGTGTCCTGGGGC AACGCCGCGGCCGCGCTCGCCAGCAAGGTGCTCGGCCCGCTCGCCGGGCGCCGCGTGGCGGTGATCGGCGCCGGCGAGAT GGCCCGCCTCACCGCCCAGCACATGCGCGACGAGCGCGCCTCGGTGGTGGTGCTGAACCGCACGCTCGCGAACGCGGAGG CGCTGGCCGCCGAGGTGGGCGGCGAGGCCCGACCGCTCGAGGCGCTGGAGCAGGAGCTGCTGCGCGCCGACGTGGTGGTG TCCGCCGCGCCGGCCGCGCCGCCGGCGCTGGCCCCGGCCGTCATGCAGCGCATCCTGCACGCCCGCCGCAAGCGGATCGT CATGGTCGACCTGGCCGTCCCCCGCGCCATCCCCGCCGAGACCGGGGCGCTGCCGGACGTCTACCTGTGCGACGTCGACG ACCTCGATCGCGTGATGAAGGCCGCCATGGCCGAGCGCGCCCAGGCGGCCCAGCACGCCGAGCGGATCGCCGACGAGGAG GTGCAGAAGTTCGCGCGCGCCGAGGCCGAGCGCCGCGCCGCGCCGCTCATCCAGGAGATGCGCAGCCGCGCCAGCGCCAT CGCGCGCGAGGAGGTGGAGCGCACGCTCCGCCGCCTCGGCGAGGACCCGGAGCTCGCGAAGCGGCTCGACGCCATGGCGG GCTCGATCGTCTCCAAGATCCTGCACGCGCCCAGCACGCGCCTGCGCCAGGCGGTGTGCGACGGCGGGGCCAACGACCCG CTGGTCGCGGCCGCCGTCCAGATCTTCGACCTGTCCGCGGCGCCGGCCGCCCGGGGCGACGCCGCCTAG
Upstream 100 bases:
>100_bases ACCCTTGCGCGCTCCGGGGCGCGCCGATGCTGAAATCCTGCACGATCTCGTGGGGCACGCCGCTTGCTCGCATGCCGCCC GTTCCCGAAAGGAGCGCCTC
Downstream 100 bases:
>100_bases CGGGGAGGTCGGGCCTTCCCCAGGCCCGGAATTCCTGAGATATTGGCGCGCGTTGTCTCACGGGCCGACCGCATGAACCT GCTCGAGCGCAGCTACCGGA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR 1 [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLVAVGLNQKGATVADREVLALPSEELLDALTAFQALDGVDEVAIVSTCYRVEIFAAARCPAAAELSLRHAMEARAGRPL PLFELQGEEAFRHLVRVASSLESAILGEPQILGQVKDAFHRAAEAGAAGKELASVLSRALAAAKRVRTETAVGRAGVSWG NAAAALASKVLGPLAGRRVAVIGAGEMARLTAQHMRDERASVVVLNRTLANAEALAAEVGGEARPLEALEQELLRADVVV SAAPAAPPALAPAVMQRILHARRKRIVMVDLAVPRAIPAETGALPDVYLCDVDDLDRVMKAAMAERAQAAQHAERIADEE VQKFARAEAERRAAPLIQEMRSRASAIAREEVERTLRRLGEDPELAKRLDAMAGSIVSKILHAPSTRLRQAVCDGGANDP LVAAAVQIFDLSAAPAARGDAA
Sequences:
>Translated_422_residues MLVAVGLNQKGATVADREVLALPSEELLDALTAFQALDGVDEVAIVSTCYRVEIFAAARCPAAAELSLRHAMEARAGRPL PLFELQGEEAFRHLVRVASSLESAILGEPQILGQVKDAFHRAAEAGAAGKELASVLSRALAAAKRVRTETAVGRAGVSWG NAAAALASKVLGPLAGRRVAVIGAGEMARLTAQHMRDERASVVVLNRTLANAEALAAEVGGEARPLEALEQELLRADVVV SAAPAAPPALAPAVMQRILHARRKRIVMVDLAVPRAIPAETGALPDVYLCDVDDLDRVMKAAMAERAQAAQHAERIADEE VQKFARAEAERRAAPLIQEMRSRASAIAREEVERTLRRLGEDPELAKRLDAMAGSIVSKILHAPSTRLRQAVCDGGANDP LVAAAVQIFDLSAAPAARGDAA >Mature_422_residues MLVAVGLNQKGATVADREVLALPSEELLDALTAFQALDGVDEVAIVSTCYRVEIFAAARCPAAAELSLRHAMEARAGRPL PLFELQGEEAFRHLVRVASSLESAILGEPQILGQVKDAFHRAAEAGAAGKELASVLSRALAAAKRVRTETAVGRAGVSWG NAAAALASKVLGPLAGRRVAVIGAGEMARLTAQHMRDERASVVVLNRTLANAEALAAEVGGEARPLEALEQELLRADVVV SAAPAAPPALAPAVMQRILHARRKRIVMVDLAVPRAIPAETGALPDVYLCDVDDLDRVMKAAMAERAQAAQHAERIADEE VQKFARAEAERRAAPLIQEMRSRASAIAREEVERTLRRLGEDPELAKRLDAMAGSIVSKILHAPSTRLRQAVCDGGANDP LVAAAVQIFDLSAAPAARGDAA
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=402, Percent_Identity=33.5820895522388, Blast_Score=203, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 44504; Mature: 44504
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAVGLNQKGATVADREVLALPSEELLDALTAFQALDGVDEVAIVSTCYRVEIFAAARC CEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC PAAAELSLRHAMEARAGRPLPLFELQGEEAFRHLVRVASSLESAILGEPQILGQVKDAFH CCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RAAEAGAAGKELASVLSRALAAAKRVRTETAVGRAGVSWGNAAAALASKVLGPLAGRRVA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE VIGAGEMARLTAQHMRDERASVVVLNRTLANAEALAAEVGGEARPLEALEQELLRADVVV EEECCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SAAPAAPPALAPAVMQRILHARRKRIVMVDLAVPRAIPAETGALPDVYLCDVDDLDRVMK CCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHH AAMAERAQAAQHAERIADEEVQKFARAEAERRAAPLIQEMRSRASAIAREEVERTLRRLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDPELAKRLDAMAGSIVSKILHAPSTRLRQAVCDGGANDPLVAAAVQIFDLSAAPAARGD CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC AA CC >Mature Secondary Structure MLVAVGLNQKGATVADREVLALPSEELLDALTAFQALDGVDEVAIVSTCYRVEIFAAARC CEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC PAAAELSLRHAMEARAGRPLPLFELQGEEAFRHLVRVASSLESAILGEPQILGQVKDAFH CCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RAAEAGAAGKELASVLSRALAAAKRVRTETAVGRAGVSWGNAAAALASKVLGPLAGRRVA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE VIGAGEMARLTAQHMRDERASVVVLNRTLANAEALAAEVGGEARPLEALEQELLRADVVV EEECCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SAAPAAPPALAPAVMQRILHARRKRIVMVDLAVPRAIPAETGALPDVYLCDVDDLDRVMK CCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHH AAMAERAQAAQHAERIADEEVQKFARAEAERRAAPLIQEMRSRASAIAREEVERTLRRLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDPELAKRLDAMAGSIVSKILHAPSTRLRQAVCDGGANDPLVAAAVQIFDLSAAPAARGD CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA