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The map label for this gene is gcvH [H]

Identifier: 220917064

GI number: 220917064

Start: 2213827

End: 2214531

Strand: Direct

Name: gcvH [H]

Synonym: A2cp1_1960

Alternate gene names: 220917064

Gene position: 2213827-2214531 (Clockwise)

Preceding gene: 220917063

Following gene: 220917065

Centisome position: 44.02

GC content: 76.6

Gene sequence:

>705_bases
ATGCAGAGCGTTCTCGAGGTCCTCCAGTCGATCGGCGTCTTCACCCTCGGCATCCTGGCCCGGTTCGGCCTCTTCCTCGC
GATGGTGGCGGTCATCGTCGTCCCGGCGCTGATCATCGCGCTGGTGGTGCGCGGGCGCGCCGAGCGGCGCGAGCGGGCGC
TCGGGATCCGCGACGTGGACGGCGTGCCGTTCCGCCCGGACCTGTTCTACGCGCCCGGCCACCTCTGGCTGCACCGGCGC
CCGGGCGGCCGCGCGGTGGAGCTCGGCCTCGACGGCATCGCGCAGCGCCTGATGCCGGCGGTCACGGCGGTGGACCTGGC
GCGGCCGGGCACGCGCGTGGCCCGCGGCGAGACCATCGCCACGCTGCACGGCGGCGGGCGCGCCCTGGAGATCCCCGCGC
CGGTGGACGGCACGGTGGTGGGCGTGAACGTCTCGGTGGTGCGCGACCCGGCGCTGGTGAAGCGCGACGGCTACGGGCGC
GGCTGGCTGGTCGCGCTCGCGCCGGCGGACGAGGCCTACGCGTCGATGCCGCGCGCCGGCGCCGCGGAGTCGTGGATGCG
GCGCGAGGCGCAGCGCTGGAACCACTTCGTCGAGCACCAGCTCGGCTTCGCCGCGGCCGACGGCGGGACGCTGGTCGCGC
CCGCGCCGTGGCTGGTCGGCGAGGAGGGATGGGCCGCCCTGACGCAGGCGTTCCTGCGGCCGTGA

Upstream 100 bases:

>100_bases
GTCGGCGGTCCCCGGCCCACTCGCTCCGGGCCGGGGACCGCAGGCGCGGGTCGATGCAGGCGCCCGGTGACGGGCGCGGG
CTCGCAGTCGGGAGGAAGCC

Downstream 100 bases:

>100_bases
GGGCCGCGTTCGCGGCGGGTGCGGCGATCGGCCGCCCCACGCACGACTTTCGCGGGCGCGCGCGGGCGCGAGCGGGCGTG
AGACCGGGTGCGGCGCGCGG

Product: glycine cleavage H-protein

Products: Proton; NADH; NH3; CO2; 5,10-methylene-THF [C]

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQSVLEVLQSIGVFTLGILARFGLFLAMVAVIVVPALIIALVVRGRAERRERALGIRDVDGVPFRPDLFYAPGHLWLHRR
PGGRAVELGLDGIAQRLMPAVTAVDLARPGTRVARGETIATLHGGGRALEIPAPVDGTVVGVNVSVVRDPALVKRDGYGR
GWLVALAPADEAYASMPRAGAAESWMRREAQRWNHFVEHQLGFAAADGGTLVAPAPWLVGEEGWAALTQAFLRP

Sequences:

>Translated_234_residues
MQSVLEVLQSIGVFTLGILARFGLFLAMVAVIVVPALIIALVVRGRAERRERALGIRDVDGVPFRPDLFYAPGHLWLHRR
PGGRAVELGLDGIAQRLMPAVTAVDLARPGTRVARGETIATLHGGGRALEIPAPVDGTVVGVNVSVVRDPALVKRDGYGR
GWLVALAPADEAYASMPRAGAAESWMRREAQRWNHFVEHQLGFAAADGGTLVAPAPWLVGEEGWAALTQAFLRP
>Mature_234_residues
MQSVLEVLQSIGVFTLGILARFGLFLAMVAVIVVPALIIALVVRGRAERRERALGIRDVDGVPFRPDLFYAPGHLWLHRR
PGGRAVELGLDGIAQRLMPAVTAVDLARPGTRVARGETIATLHGGGRALEIPAPVDGTVVGVNVSVVRDPALVKRDGYGR
GWLVALAPADEAYASMPRAGAAESWMRREAQRWNHFVEHQLGFAAADGGTLVAPAPWLVGEEGWAALTQAFLRP

Specific function: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein [H]

COG id: COG0509

COG function: function code E; Glycine cleavage system H protein (lipoate-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 lipoyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003016
- InterPro:   IPR002930
- InterPro:   IPR017453
- InterPro:   IPR011053 [H]

Pfam domain/function: PF01597 GCV_H [H]

EC number: NA

Molecular weight: Translated: 25084; Mature: 25084

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVLEVLQSIGVFTLGILARFGLFLAMVAVIVVPALIIALVVRGRAERRERALGIRDVD
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
GVPFRPDLFYAPGHLWLHRRPGGRAVELGLDGIAQRLMPAVTAVDLARPGTRVARGETIA
CCCCCCCEEECCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
TLHGGGRALEIPAPVDGTVVGVNVSVVRDPALVKRDGYGRGWLVALAPADEAYASMPRAG
EEECCCEEEECCCCCCCEEEEEEEEEEECCHHEECCCCCCEEEEEECCCCHHHHHCCCCC
AAESWMRREAQRWNHFVEHQLGFAAADGGTLVAPAPWLVGEEGWAALTQAFLRP
CHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCCEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MQSVLEVLQSIGVFTLGILARFGLFLAMVAVIVVPALIIALVVRGRAERRERALGIRDVD
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
GVPFRPDLFYAPGHLWLHRRPGGRAVELGLDGIAQRLMPAVTAVDLARPGTRVARGETIA
CCCCCCCEEECCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
TLHGGGRALEIPAPVDGTVVGVNVSVVRDPALVKRDGYGRGWLVALAPADEAYASMPRAG
EEECCCEEEECCCCCCCEEEEEEEEEEECCHHEECCCCCCEEEEEECCCCHHHHHCCCCC
AAESWMRREAQRWNHFVEHQLGFAAADGGTLVAPAPWLVGEEGWAALTQAFLRP
CHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCCEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Lipoyl Cofactor. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD; L-glycine; THF [C]

Specific reaction: NAD + L-glycine + THF = Proton + NADH + NH3 + CO2 + 5,10-methylene-THF [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA