| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917065
Identifier: 220917065
GI number: 220917065
Start: 2215080
End: 2216120
Strand: Direct
Name: 220917065
Synonym: A2cp1_1961
Alternate gene names: NA
Gene position: 2215080-2216120 (Clockwise)
Preceding gene: 220917064
Following gene: 220917066
Centisome position: 44.04
GC content: 68.78
Gene sequence:
>1041_bases ATGATCCGACGCCTGTTGCCCCTCCTCCTCGCGTTCGCCGCGAACCCAGCCTGGGCGGGTATCCCGGCCGAGCAGGAGGA CTGCCTCGGCTGTCACAGCGACCCGAGCCAGACCTTCGACCTCCCGAGCGGCGAGAAGCTCTCGCTGTACGTCGACCAGG ACGCGTTCGCGAAGTCGGTCCACGGCGAGGCGCTCCGCTGCACGGAGTGCCACACCGACAAGACCAGCGACCACGCCACC GGCGAGCTGAAGTTCAAGACCCGCCGCGACGTGACCCGCGCCTACTACGAGCAGTGCAAGGGCTGCCACTTCGCGAACTA CACCAAGACGCTCGACGGCGTTCACTACGCGGTGATGGCCAAGGGCAACGACAAGGCCGCGCTCTGCGTGGACTGCCACG GCGCCCACGACATCTCCCGGCCGGGCCAGCCGCGCACGCGCATCTCGAAGATGTGCTCGGGCTGCCACGCGGAGGAGGCG GACGTCTACGCGAAGAGCGTGCACGGCCGCGCGGCGGAGAGCAGCCCCGACGTGCCGGTGTGCACCGACTGCCACCGCGC CCACGACACCACCGACCCGCGCGACGGCCAGCTCGCCATGCGCACCCCGGAGATCTGCGGGCGCTGCCACACCGACGAGA AGCTGATGTCGAAGTACGGCCTCTCCAGCAAGGTGGTGTCGACCTACCTCTCCGACTTCCACGGCATGGCCGCGACGCTC CAGCGCAAGCAGAAGAACGCGCCGGACGCGCGCCTCGCCGCGGTCTGCACCGACTGCCATGGCGTCCACGACATCCAGTC GTCCAAGGACCCGTCGTCCACGGTGATGGCGGCCAACCTGCAGAAGACCTGCGCGAAGTGCCACGAGGGCGCCAGCGCGA GCTTCCCGAAGGCCTGGCTCTCGCACTACGAGCCCACGCCGCAGAAGGCGCCGCTCGTGTGGGGCGTGCAGGTCTTCTAC AAGATGCTGATCCCGTTCATGGTGGGCGGGCTCGTGCTCCAGATCGCGCTGCACCTCTGGCGCGTGGTGGTGAACCGATG A
Upstream 100 bases:
>100_bases TCCGGCCGGAGGCGTTGGACAATCCGCCCGCCCCCTGGTAGGAAGTGGCGCAATCCGTGGCTGTCACGGATTGACGCACC GACTCCTCCAGGGTGTGCAA
Downstream 100 bases:
>100_bases GCGCTTACATCGTCCGCTTCAACCTGCAGCAGCGGATCGAGCACTTCATCACGATGCTCGTGTTCGTGCTGCTCTGCCTC ACCGGCCTGCCGCAGAAGTT
Product: cytochrome C family protein
Products: NA
Alternate protein names: Cytochrome B Subunit Of Formate Dehydrogenase-Like Protein; Cytochrome B/B6 Domain; Multiheme C-Type Cytochrome; Cytochrome B Subunit Of Formate Dehydrogenase-Like; FfdnI Cytochromesubunit B Of Formate Dehydrogenase; Deca-Heme C-Type Cytochrome; Cytochrome C
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIRRLLPLLLAFAANPAWAGIPAEQEDCLGCHSDPSQTFDLPSGEKLSLYVDQDAFAKSVHGEALRCTECHTDKTSDHAT GELKFKTRRDVTRAYYEQCKGCHFANYTKTLDGVHYAVMAKGNDKAALCVDCHGAHDISRPGQPRTRISKMCSGCHAEEA DVYAKSVHGRAAESSPDVPVCTDCHRAHDTTDPRDGQLAMRTPEICGRCHTDEKLMSKYGLSSKVVSTYLSDFHGMAATL QRKQKNAPDARLAAVCTDCHGVHDIQSSKDPSSTVMAANLQKTCAKCHEGASASFPKAWLSHYEPTPQKAPLVWGVQVFY KMLIPFMVGGLVLQIALHLWRVVVNR
Sequences:
>Translated_346_residues MIRRLLPLLLAFAANPAWAGIPAEQEDCLGCHSDPSQTFDLPSGEKLSLYVDQDAFAKSVHGEALRCTECHTDKTSDHAT GELKFKTRRDVTRAYYEQCKGCHFANYTKTLDGVHYAVMAKGNDKAALCVDCHGAHDISRPGQPRTRISKMCSGCHAEEA DVYAKSVHGRAAESSPDVPVCTDCHRAHDTTDPRDGQLAMRTPEICGRCHTDEKLMSKYGLSSKVVSTYLSDFHGMAATL QRKQKNAPDARLAAVCTDCHGVHDIQSSKDPSSTVMAANLQKTCAKCHEGASASFPKAWLSHYEPTPQKAPLVWGVQVFY KMLIPFMVGGLVLQIALHLWRVVVNR >Mature_346_residues MIRRLLPLLLAFAANPAWAGIPAEQEDCLGCHSDPSQTFDLPSGEKLSLYVDQDAFAKSVHGEALRCTECHTDKTSDHAT GELKFKTRRDVTRAYYEQCKGCHFANYTKTLDGVHYAVMAKGNDKAALCVDCHGAHDISRPGQPRTRISKMCSGCHAEEA DVYAKSVHGRAAESSPDVPVCTDCHRAHDTTDPRDGQLAMRTPEICGRCHTDEKLMSKYGLSSKVVSTYLSDFHGMAATL QRKQKNAPDARLAAVCTDCHGVHDIQSSKDPSSTVMAANLQKTCAKCHEGASASFPKAWLSHYEPTPQKAPLVWGVQVFY KMLIPFMVGGLVLQIALHLWRVVVNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38015; Mature: 38015
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRLLPLLLAFAANPAWAGIPAEQEDCLGCHSDPSQTFDLPSGEKLSLYVDQDAFAKSV CHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH HGEALRCTECHTDKTSDHATGELKFKTRRDVTRAYYEQCKGCHFANYTKTLDGVHYAVMA CCCCEEEHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEE KGNDKAALCVDCHGAHDISRPGQPRTRISKMCSGCHAEEADVYAKSVHGRAAESSPDVPV CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC CTDCHRAHDTTDPRDGQLAMRTPEICGRCHTDEKLMSKYGLSSKVVSTYLSDFHGMAATL CCCCHHHCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QRKQKNAPDARLAAVCTDCHGVHDIQSSKDPSSTVMAANLQKTCAKCHEGASASFPKAWL HHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH SHYEPTPQKAPLVWGVQVFYKMLIPFMVGGLVLQIALHLWRVVVNR HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRRLLPLLLAFAANPAWAGIPAEQEDCLGCHSDPSQTFDLPSGEKLSLYVDQDAFAKSV CHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH HGEALRCTECHTDKTSDHATGELKFKTRRDVTRAYYEQCKGCHFANYTKTLDGVHYAVMA CCCCEEEHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEE KGNDKAALCVDCHGAHDISRPGQPRTRISKMCSGCHAEEADVYAKSVHGRAAESSPDVPV CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC CTDCHRAHDTTDPRDGQLAMRTPEICGRCHTDEKLMSKYGLSSKVVSTYLSDFHGMAATL CCCCHHHCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QRKQKNAPDARLAAVCTDCHGVHDIQSSKDPSSTVMAANLQKTCAKCHEGASASFPKAWL HHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH SHYEPTPQKAPLVWGVQVFYKMLIPFMVGGLVLQIALHLWRVVVNR HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA