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The map label for this gene is amzA [H]

Identifier: 220917057

GI number: 220917057

Start: 2207821

End: 2208363

Strand: Direct

Name: amzA [H]

Synonym: A2cp1_1953

Alternate gene names: 220917057

Gene position: 2207821-2208363 (Clockwise)

Preceding gene: 220917056

Following gene: 220917058

Centisome position: 43.9

GC content: 72.74

Gene sequence:

>543_bases
ATGGACCCGATCTTCATCTGGTGGATCGGCGAGGCGGCGCCCGACCGGGCGCTGCTGGACCACGCCGCGCTGCACCTGGC
CCGCGCCTTCGGGCGCCCGGTGCAGGAGTGGACCTCGCCGGAGCGCCCGCGCCACGCCTACGACCCGAAGCGCAAGCAGC
ACCTCTCCGGCGCGATCCTGAAATGGCTGCTGGAGGCGGGGCCGGGCGCCGGGAAGGTGCTCGGGGTGACCGACCGCGAC
CTGTTCATCCCCATCCTCACCTACGTGTTCGGGGAGGGGCAGCTCGGGGGCGGCGCGGCGGTCGTCTCCACCGCGCGGCT
GCTGGAGGACGTCGAGCTGATCGGGCCGCAGCTGCTGCTGGAGCGGCTCGCCAAGGAGGCGGTGCACGAGGTCGGGCACG
CGTTCGGCCTGCTGCACTGCGCGACGCCGGTGTGCGTGATGGCGCGCTCGTCGGGCGTTCGCAACGTGGACGAGAAGATG
CCGGAGCTCTGCTCCGAGTGCCGACGCAGGCTCGAGGAGCTGCAGGCCGGAGGTCCCAGGTGA

Upstream 100 bases:

>100_bases
GGCTGCCGCCCCGGAGGGCGGCGGAGTGATGCGCGGCGGCGGGCGGACCAGGGCGGGTTCCGGGGGCGCGCGTCGGCGGC
GCGCCCAGGGCATCGAATGA

Downstream 100 bases:

>100_bases
TGTCCAACGAGAGAACGCGCATCCTGGTGGTGGACGACGAGGAGATCGTCCGCGAGTCGCTGGGCGGCTGGCTCGAGAAG
GACGGCTACTCCGTCCACGT

Product: peptidase zinc-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDPIFIWWIGEAAPDRALLDHAALHLARAFGRPVQEWTSPERPRHAYDPKRKQHLSGAILKWLLEAGPGAGKVLGVTDRD
LFIPILTYVFGEGQLGGGAAVVSTARLLEDVELIGPQLLLERLAKEAVHEVGHAFGLLHCATPVCVMARSSGVRNVDEKM
PELCSECRRRLEELQAGGPR

Sequences:

>Translated_180_residues
MDPIFIWWIGEAAPDRALLDHAALHLARAFGRPVQEWTSPERPRHAYDPKRKQHLSGAILKWLLEAGPGAGKVLGVTDRD
LFIPILTYVFGEGQLGGGAAVVSTARLLEDVELIGPQLLLERLAKEAVHEVGHAFGLLHCATPVCVMARSSGVRNVDEKM
PELCSECRRRLEELQAGGPR
>Mature_180_residues
MDPIFIWWIGEAAPDRALLDHAALHLARAFGRPVQEWTSPERPRHAYDPKRKQHLSGAILKWLLEAGPGAGKVLGVTDRD
LFIPILTYVFGEGQLGGGAAVVSTARLLEDVELIGPQLLLERLAKEAVHEVGHAFGLLHCATPVCVMARSSGVRNVDEKM
PELCSECRRRLEELQAGGPR

Specific function: Probable zinc metalloprotease [H]

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012962
- InterPro:   IPR012091 [H]

Pfam domain/function: PF07998 Peptidase_M54 [H]

EC number: NA

Molecular weight: Translated: 19754; Mature: 19754

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPIFIWWIGEAAPDRALLDHAALHLARAFGRPVQEWTSPERPRHAYDPKRKQHLSGAIL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
KWLLEAGPGAGKVLGVTDRDLFIPILTYVFGEGQLGGGAAVVSTARLLEDVELIGPQLLL
HHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHH
ERLAKEAVHEVGHAFGLLHCATPVCVMARSSGVRNVDEKMPELCSECRRRLEELQAGGPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDPIFIWWIGEAAPDRALLDHAALHLARAFGRPVQEWTSPERPRHAYDPKRKQHLSGAIL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
KWLLEAGPGAGKVLGVTDRDLFIPILTYVFGEGQLGGGAAVVSTARLLEDVELIGPQLLL
HHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHH
ERLAKEAVHEVGHAFGLLHCATPVCVMARSSGVRNVDEKMPELCSECRRRLEELQAGGPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]