| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917032
Identifier: 220917032
GI number: 220917032
Start: 2176796
End: 2178013
Strand: Direct
Name: 220917032
Synonym: A2cp1_1928
Alternate gene names: NA
Gene position: 2176796-2178013 (Clockwise)
Preceding gene: 220917031
Following gene: 220917033
Centisome position: 43.28
GC content: 83.91
Gene sequence:
>1218_bases ATGCTCCTGCTGGTGGGCCCGGGCTCCGCTTCGCACGCCGCGCCGTCGGTCGCGGCTCCGGCGGCGGCGTCCTCCGCCGC GGCGGCGGGGCCGTCCATCGAGGTCGAGCTGCTCGCCCGCCTCGCGCCGCGGCGCATCGAGCTGGAGGGCGGCGGGCGGC GGCGCTCGGTCGCGGCCGCCGGCGACGGGCTCCGGGTGGACGGGGAGCCGGCGGGCGCGGTGCTCTCGCTCCCGGTCCGC ACCTGGCGCATCGTCCCCGGCGCCGCCGCCGGCCCGGCGGCCCGGCCGCGCACCTACCGCGCCGCGCTCCGGATCCGCGC CGAGCGCGGGGTGCTGCGGGTGCGCGCCACGCTGGCGCTCGAGGACTACGTGGCCGGCGTGGTCGCGTCGGAGGCGCTGC CGGGCACGCCGCGCGAGGCGCTCCGCGCGCTGGCGGTGGTGGCCCGGTCGTACGCGCTCGCCGCGCCGCCGCGCCACCCG GAGGGCGCCCGCTGCGATCTCGCCCATTGCCAGCTCCTCCGCGGCGGCGGGGCGGACCGCGCGCACGAGGCGGCCGCGCG GGCGGCGGCGCGCGCCACCGCAGGCGAGGTGCTCCGGCTGCCGGGCGGCGCCGTGGCGGCGGCGCCGTTCCACGCGGCCT GCGGCGGCCACACCGCCGATCCGCGCCAGGCGTTCGGCGGTGAGGGGACGGGCGCCGCGGCGGTGGCCGACCCGGGCTGC CCGCCGGCGCGCTGGCGCGCGGCGCTCGACCCGGCCGCGCTGGCGGCGGCGGTGCGCGCCGCGCTCGCGGCCTCGGATCC GGCCGGCGCCGCGGCGGTGCCGGCGCGGCTCGGCGCGCCGGACCTCGCGGTGCGCGCCGGCGCGGGCGGGTGGGTGACGC AGGTGGCGGGCGCCGGCGGCGGCTGGGCGCTCGGCGGCGATGCGTTCGCGCGGGCCGCCGACGCGTCCGCGGGGCGCGGG GTGGTGCGGAGCTCGCGCTTCCGGCTCGGCGGCGGCGCCGGGCCTCCGGTGCTGGAGGGCGCCGGGCATGGCCACGGGGT GGGGCTCTGCCAGGCCGGCGCGGCGCGCCGCGCGCGCGGCGGGGAGGGGTACCGCGGGATCCTGCGCGCGTACTTCCCGG CCGCCACGGTGGAACGGCTACCGGACGGGCCGCCCACCGAAAGATCCGCCGATGTGGGCGCACGCCGCGCCCTACCGCCG GGCGGCGTGCGTCGCTAG
Upstream 100 bases:
>100_bases GGCTGGAGGTGTGGCTCCCCGGCGGTGCCGCGCCGGCCGCGGTCAGCACCTTCACGGTGCGGGGCGCGCAGTGACGGCGC GGAGGGTGGCCGTCGCGGGG
Downstream 100 bases:
>100_bases GCTCCCCGCACCATGCCGAAGCCCTTCGACGAGGCGCACGCAGCCACCTACGACCAGCACTTCGCCGCGCTCGCCCCGAT GCGCGACGCGTTGCAGCTCG
Product: SpoIID/LytB domain-containing protein
Products: NA
Alternate protein names: Sporulation Protein
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLLLVGPGSASHAAPSVAAPAAASSAAAAGPSIEVELLARLAPRRIELEGGGRRRSVAAAGDGLRVDGEPAGAVLSLPVR TWRIVPGAAAGPAARPRTYRAALRIRAERGVLRVRATLALEDYVAGVVASEALPGTPREALRALAVVARSYALAAPPRHP EGARCDLAHCQLLRGGGADRAHEAAARAAARATAGEVLRLPGGAVAAAPFHAACGGHTADPRQAFGGEGTGAAAVADPGC PPARWRAALDPAALAAAVRAALAASDPAGAAAVPARLGAPDLAVRAGAGGWVTQVAGAGGGWALGGDAFARAADASAGRG VVRSSRFRLGGGAGPPVLEGAGHGHGVGLCQAGAARRARGGEGYRGILRAYFPAATVERLPDGPPTERSADVGARRALPP GGVRR
Sequences:
>Translated_405_residues MLLLVGPGSASHAAPSVAAPAAASSAAAAGPSIEVELLARLAPRRIELEGGGRRRSVAAAGDGLRVDGEPAGAVLSLPVR TWRIVPGAAAGPAARPRTYRAALRIRAERGVLRVRATLALEDYVAGVVASEALPGTPREALRALAVVARSYALAAPPRHP EGARCDLAHCQLLRGGGADRAHEAAARAAARATAGEVLRLPGGAVAAAPFHAACGGHTADPRQAFGGEGTGAAAVADPGC PPARWRAALDPAALAAAVRAALAASDPAGAAAVPARLGAPDLAVRAGAGGWVTQVAGAGGGWALGGDAFARAADASAGRG VVRSSRFRLGGGAGPPVLEGAGHGHGVGLCQAGAARRARGGEGYRGILRAYFPAATVERLPDGPPTERSADVGARRALPP GGVRR >Mature_405_residues MLLLVGPGSASHAAPSVAAPAAASSAAAAGPSIEVELLARLAPRRIELEGGGRRRSVAAAGDGLRVDGEPAGAVLSLPVR TWRIVPGAAAGPAARPRTYRAALRIRAERGVLRVRATLALEDYVAGVVASEALPGTPREALRALAVVARSYALAAPPRHP EGARCDLAHCQLLRGGGADRAHEAAARAAARATAGEVLRLPGGAVAAAPFHAACGGHTADPRQAFGGEGTGAAAVADPGC PPARWRAALDPAALAAAVRAALAASDPAGAAAVPARLGAPDLAVRAGAGGWVTQVAGAGGGWALGGDAFARAADASAGRG VVRSSRFRLGGGAGPPVLEGAGHGHGVGLCQAGAARRARGGEGYRGILRAYFPAATVERLPDGPPTERSADVGARRALPP GGVRR
Specific function: Unknown
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39940; Mature: 39940
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: PS00560 CARBOXYPEPT_SER_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLVGPGSASHAAPSVAAPAAASSAAAAGPSIEVELLARLAPRRIELEGGGRRRSVAAA CEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECCCCCEEEEEEC GDGLRVDGEPAGAVLSLPVRTWRIVPGAAAGPAARPRTYRAALRIRAERGVLRVRATLAL CCCEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHEEHHCCCEEEEHHHHHH EDYVAGVVASEALPGTPREALRALAVVARSYALAAPPRHPEGARCDLAHCQLLRGGGADR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCH AHEAAARAAARATAGEVLRLPGGAVAAAPFHAACGGHTADPRQAFGGEGTGAAAVADPGC HHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHCCCCCCCHHHHCCCCCCCCEEECCCCC PPARWRAALDPAALAAAVRAALAASDPAGAAAVPARLGAPDLAVRAGAGGWVTQVAGAGG CHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEECCCCCCHHHHCCCCC GWALGGDAFARAADASAGRGVVRSSRFRLGGGAGPPVLEGAGHGHGVGLCQAGAARRARG CCCCCCHHHHHHHCCCCCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHCCC GEGYRGILRAYFPAATVERLPDGPPTERSADVGARRALPPGGVRR CCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MLLLVGPGSASHAAPSVAAPAAASSAAAAGPSIEVELLARLAPRRIELEGGGRRRSVAAA CEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECCCCCEEEEEEC GDGLRVDGEPAGAVLSLPVRTWRIVPGAAAGPAARPRTYRAALRIRAERGVLRVRATLAL CCCEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHEEHHCCCEEEEHHHHHH EDYVAGVVASEALPGTPREALRALAVVARSYALAAPPRHPEGARCDLAHCQLLRGGGADR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCH AHEAAARAAARATAGEVLRLPGGAVAAAPFHAACGGHTADPRQAFGGEGTGAAAVADPGC HHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHCCCCCCCHHHHCCCCCCCCEEECCCCC PPARWRAALDPAALAAAVRAALAASDPAGAAAVPARLGAPDLAVRAGAGGWVTQVAGAGG CHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEECCCCCCHHHHCCCCC GWALGGDAFARAADASAGRGVVRSSRFRLGGGAGPPVLEGAGHGHGVGLCQAGAARRARG CCCCCCHHHHHHHCCCCCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHCCC GEGYRGILRAYFPAATVERLPDGPPTERSADVGARRALPPGGVRR CCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA