| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916853
Identifier: 220916853
GI number: 220916853
Start: 1953927
End: 1955534
Strand: Direct
Name: 220916853
Synonym: A2cp1_1749
Alternate gene names: NA
Gene position: 1953927-1955534 (Clockwise)
Preceding gene: 220916851
Following gene: 220916855
Centisome position: 38.85
GC content: 76.06
Gene sequence:
>1608_bases ATGGCGACCCCTGGCGACCGCGGCGGGCCCGACCTCGATCCGGCCGACCTCGCGGCGGCCCTCCGCGTGCTGGCGCGGGT GGCCGACGACCGCACCGTGCTCGCGCGCGTGGACGCGGACGCGCGCGTGGCGCTGCAGCGGCTCGCCGGCGAGGTGGCGC GGCCGGATCTCAAGGCCCGCAAGAAGCTGCAGAAGGCCCTGCTCAAGCAGGAGCACCGCGCGCGCCGCTCCCGGGACGCC GACCTGCGCCGGGACACCGGCATCCAGCGGCTCCGGCAGGCGCCGGTGTTCGTGGCGCCGCTCCCCGAGCTGCCGCCGCC CGGCGCCGACGCGTCCGGCTGGTGGCCGCGGCTGCCGGGCGCGGGCGACGCCGCCGCGGGCGCGGACACCGCCGCGGAGA ACACCGGGCCGGAGCTGTCGGAGCCGCGCAAGTGCTACGTGTGCAAGGCGACGTTCCGCCGCCTGCACCCGTTCTACGAT CAGCTGTGCCGCGCCTGCGGCGACGAGAACCAGGCGCGCCGCACCGCCGGCGTGGACCTGCGGGGCCGGGTGGCGCTCGT CACCGGCGCGCGCGTGAAGATCGGCTACCAGGCGGCGCTGCTGCTGCTCCGCGCCGGCTGCACCGTGGTGGCGCTGACCC GGTTCCCGCGCGACGCCGCGGCGCGCTACGCGCGCGAGGCGGACTTCGAGCGCTGGCGGGACCGGCTCTCCATCCACGGC GTGGACCTGCGCCACACGCCCAGCGTGGAGCTGCTCTGCCAGCGCCTCGACGCGACGCTGCCGCGGCTCGACTTCCAGCT CCACAACGCCTGCCAGACGGTGCGGCGGCCGCCCGGGTTCTACGCGCACCTGCTCGAGGCCGAGCAGGTGGCGCCCTCCG CGCTGCCGCCGGCCGAGCGCGCGCTGCTGCGCGACTGGGAGGCGCTCCGCGACGCGCTCCGCGGCCAGGGCGGCGCGGCG GGCGTGACCGGGCCGGCGCTCCTCTCGCAGGCGCGCAGCGACGCGGACCTGCTCCTGCCCGGGAAGAGCGCGTTGGAGCT GTTCCCGCGCGGCGTGCTCGACCAGGACCTGCAGCAGGTGGACCTGCGCACGCACAACTCCTGGCGCCTCCGGCTGCACG AGGTGCCCACGCTGGAGCTGCTGGAGGTGCTGCTGGTGAACGCGACGGCGCCGTTCGTGATGGCGTCGCGGCTGAAGCCG CTGATGACGCGGGCGCCCGGGGCGCCCGAGGGGACCGCCACCAGCGGCGACGCGGCCCGCCACGTGGTGATGGTGTCGGC GATGGAGGGGCAGTTCTACCGCGAGCACAAGACCGACCGGCACCCGCACACCAACATGGCCAAGGCGGCGCTCAACATGC TGGTGCGGACCAGCGCGGCGGACTACGCGAAGGACGGGATCTTCCTGAACGCGGTGGACACCGGCTGGGTCACCGACGAG GACCCGGCCCACCTCGCCGCGCGCAAGGTGGAGGAGCACGCGTTCTCGCCGCCGCTCGACGTGGTCGACGGCGCGGCGCG CATCGTGGCGCCCATCTTCGACGGCTTCCGCACCGGGCGGCATCCGGCCGGGCAGTTCTTCAAGGACTACCGGCCGGTGC CGTGGTGA
Upstream 100 bases:
>100_bases GACCCGCACCGCCGGGACGCGCGGACGGGGGACAGATGGGGCACGCCGCCACGCGGCGGGGGTGGGCACGCGCCCGCAGC CGGGGTATGGATGCGCCCCC
Downstream 100 bases:
>100_bases GGTCGGGGCGGGGCGCAGCCCCGAGCGCGGCAAGGCCGCGCCCGCGGGGACGTCGTGCGAGCCCGCGCAGGCGGGCGCAC GAGGTCACGGGACCCGCGCA
Product: oxidoreductase
Products: NA
Alternate protein names: Short Chain Dehydrogenase; Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short-Chain Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short-Chain Alcohol Dehydrogenase Like Protein; Short-Chain Dehydrogenases/Reductases Family Protein; Short-Chain Dehydrogenase/Reductase SDR
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MATPGDRGGPDLDPADLAAALRVLARVADDRTVLARVDADARVALQRLAGEVARPDLKARKKLQKALLKQEHRARRSRDA DLRRDTGIQRLRQAPVFVAPLPELPPPGADASGWWPRLPGAGDAAAGADTAAENTGPELSEPRKCYVCKATFRRLHPFYD QLCRACGDENQARRTAGVDLRGRVALVTGARVKIGYQAALLLLRAGCTVVALTRFPRDAAARYAREADFERWRDRLSIHG VDLRHTPSVELLCQRLDATLPRLDFQLHNACQTVRRPPGFYAHLLEAEQVAPSALPPAERALLRDWEALRDALRGQGGAA GVTGPALLSQARSDADLLLPGKSALELFPRGVLDQDLQQVDLRTHNSWRLRLHEVPTLELLEVLLVNATAPFVMASRLKP LMTRAPGAPEGTATSGDAARHVVMVSAMEGQFYREHKTDRHPHTNMAKAALNMLVRTSAADYAKDGIFLNAVDTGWVTDE DPAHLAARKVEEHAFSPPLDVVDGAARIVAPIFDGFRTGRHPAGQFFKDYRPVPW
Sequences:
>Translated_535_residues MATPGDRGGPDLDPADLAAALRVLARVADDRTVLARVDADARVALQRLAGEVARPDLKARKKLQKALLKQEHRARRSRDA DLRRDTGIQRLRQAPVFVAPLPELPPPGADASGWWPRLPGAGDAAAGADTAAENTGPELSEPRKCYVCKATFRRLHPFYD QLCRACGDENQARRTAGVDLRGRVALVTGARVKIGYQAALLLLRAGCTVVALTRFPRDAAARYAREADFERWRDRLSIHG VDLRHTPSVELLCQRLDATLPRLDFQLHNACQTVRRPPGFYAHLLEAEQVAPSALPPAERALLRDWEALRDALRGQGGAA GVTGPALLSQARSDADLLLPGKSALELFPRGVLDQDLQQVDLRTHNSWRLRLHEVPTLELLEVLLVNATAPFVMASRLKP LMTRAPGAPEGTATSGDAARHVVMVSAMEGQFYREHKTDRHPHTNMAKAALNMLVRTSAADYAKDGIFLNAVDTGWVTDE DPAHLAARKVEEHAFSPPLDVVDGAARIVAPIFDGFRTGRHPAGQFFKDYRPVPW >Mature_534_residues ATPGDRGGPDLDPADLAAALRVLARVADDRTVLARVDADARVALQRLAGEVARPDLKARKKLQKALLKQEHRARRSRDAD LRRDTGIQRLRQAPVFVAPLPELPPPGADASGWWPRLPGAGDAAAGADTAAENTGPELSEPRKCYVCKATFRRLHPFYDQ LCRACGDENQARRTAGVDLRGRVALVTGARVKIGYQAALLLLRAGCTVVALTRFPRDAAARYAREADFERWRDRLSIHGV DLRHTPSVELLCQRLDATLPRLDFQLHNACQTVRRPPGFYAHLLEAEQVAPSALPPAERALLRDWEALRDALRGQGGAAG VTGPALLSQARSDADLLLPGKSALELFPRGVLDQDLQQVDLRTHNSWRLRLHEVPTLELLEVLLVNATAPFVMASRLKPL MTRAPGAPEGTATSGDAARHVVMVSAMEGQFYREHKTDRHPHTNMAKAALNMLVRTSAADYAKDGIFLNAVDTGWVTDED PAHLAARKVEEHAFSPPLDVVDGAARIVAPIFDGFRTGRHPAGQFFKDYRPVPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58632; Mature: 58500
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPGDRGGPDLDPADLAAALRVLARVADDRTVLARVDADARVALQRLAGEVARPDLKAR CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHH KKLQKALLKQEHRARRSRDADLRRDTGIQRLRQAPVFVAPLPELPPPGADASGWWPRLPG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC AGDAAAGADTAAENTGPELSEPRKCYVCKATFRRLHPFYDQLCRACGDENQARRTAGVDL CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHCCCCHHHHHHCCCCC RGRVALVTGARVKIGYQAALLLLRAGCTVVALTRFPRDAAARYAREADFERWRDRLSIHG CCCEEEEECCEEEEHHHHHHHHHHCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCC VDLRHTPSVELLCQRLDATLPRLDFQLHNACQTVRRPPGFYAHLLEAEQVAPSALPPAER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH ALLRDWEALRDALRGQGGAAGVTGPALLSQARSDADLLLPGKSALELFPRGVLDQDLQQV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHHHHHH DLRTHNSWRLRLHEVPTLELLEVLLVNATAPFVMASRLKPLMTRAPGAPEGTATSGDAAR HHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH HVVMVSAMEGQFYREHKTDRHPHTNMAKAALNMLVRTSAADYAKDGIFLNAVDTGWVTDE HEEEEEHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC DPAHLAARKVEEHAFSPPLDVVDGAARIVAPIFDGFRTGRHPAGQFFKDYRPVPW CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC >Mature Secondary Structure ATPGDRGGPDLDPADLAAALRVLARVADDRTVLARVDADARVALQRLAGEVARPDLKAR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHH KKLQKALLKQEHRARRSRDADLRRDTGIQRLRQAPVFVAPLPELPPPGADASGWWPRLPG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC AGDAAAGADTAAENTGPELSEPRKCYVCKATFRRLHPFYDQLCRACGDENQARRTAGVDL CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHCCCCHHHHHHCCCCC RGRVALVTGARVKIGYQAALLLLRAGCTVVALTRFPRDAAARYAREADFERWRDRLSIHG CCCEEEEECCEEEEHHHHHHHHHHCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCC VDLRHTPSVELLCQRLDATLPRLDFQLHNACQTVRRPPGFYAHLLEAEQVAPSALPPAER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH ALLRDWEALRDALRGQGGAAGVTGPALLSQARSDADLLLPGKSALELFPRGVLDQDLQQV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHHHHHH DLRTHNSWRLRLHEVPTLELLEVLLVNATAPFVMASRLKPLMTRAPGAPEGTATSGDAAR HHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH HVVMVSAMEGQFYREHKTDRHPHTNMAKAALNMLVRTSAADYAKDGIFLNAVDTGWVTDE HEEEEEHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC DPAHLAARKVEEHAFSPPLDVVDGAARIVAPIFDGFRTGRHPAGQFFKDYRPVPW CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA