Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is cphA [H]
Identifier: 220916778
GI number: 220916778
Start: 1865294
End: 1866250
Strand: Direct
Name: cphA [H]
Synonym: A2cp1_1673
Alternate gene names: 220916778
Gene position: 1865294-1866250 (Clockwise)
Preceding gene: 220916777
Following gene: 220916779
Centisome position: 37.09
GC content: 76.07
Gene sequence:
>957_bases ATGGCGCCCGCGCTCGCCACGCTGCTCGCGGCGCTCGCCGCGGCCGCCCCCGCGCCGGCCCGCGCGGCCGATCCCGTCCT CGAGCCGGTCCGGCTCGCGCCGCGGGTCTGGCTGGTGCAAGGCGACCCGGGCGTCGCCTCGGCGGCGAACCGCGGCTTCA ACTCCAACGCGGCGTTCGTCGTGACCGGCGACGGCGTGGTGGTGATCGACGCCCTCGGCACGCCGGCGCTGGGCCGCGCG CTGGTGCGCGCCATCCGCAAGGTGACCCGCCAGCCGATCCGGCGGGTGATCCTGACGCACTACCACGCCGACCACGTCTA CGGCCTCGGCGCGCTGAAGGCGGCGGGGGCCGAGGTCTGGGCGAGCGCGGAGGGCAGGGCGTACCTCGAGGGCGAGGAGG CGGCGAAGCGGCTCGAGCAGCGCCGGAAGGAGCTGGCGCCGTGGTTCGACGCCGGAAACCCGCTGCTCCCCGCGGACCGC TGGCTCGACGGGGACGCCGCCTTCGAGCTGGGGGGCGCGCGCTTCGAGGTGGTCCGGCTCGGACCGGCGCACTCGCCCGA GGACCTGATGGTGGTCCTGCCGGACGACGGCGTGGTCTTCTCCGGCGACGTCATCTTCGCCGGCCGCATCCCGTTCGTCG GCGAGGCCGACAGCCGCCGCTGGCTGGCGGCGATCGACCGGCTCCTGGAGCGCCGCCCGAAGCTGCTCGTCGCGGGCCAC GGCCCCGCGTCGCGGGACCCGGCCACCCACCTCGCCCTGACCCGCGACTACCTCCGCCACCTCCGCGCGGTGATGGGGGC GGCGGTCCAGGACCTCGTCCCGTTCGAGGAGGCGTACGCCGCCGCCGACTGGAGCGCGTACGCGAAGCTCCCCGCGTTCG AGCCGGCGAACCGCATCAACGCCTACGGGACCTACCTCACCATGGAGCGCGAGATGCTCGAGGCGGGCCGGCAGTGA
Upstream 100 bases:
>100_bases TGGTGGGCCGCTGGCTGCGCGCCCAGAAGACGATCACGCCGCGCACGCCGAACCTGCCGCGCCTGGTCGGCGTGGGCCGG GATCCGGGGATGTCCACCTG
Downstream 100 bases:
>100_bases GCCGGCCGCGCGGAGAGCGCGACGCTCCCGTTCAACCCCGCAACCGGAGGAACCCCACATGAAGAAGTCGATCGCGATGT CCCTCGCCGCCGCCGCCATC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAPALATLLAALAAAAPAPARAADPVLEPVRLAPRVWLVQGDPGVASAANRGFNSNAAFVVTGDGVVVIDALGTPALGRA LVRAIRKVTRQPIRRVILTHYHADHVYGLGALKAAGAEVWASAEGRAYLEGEEAAKRLEQRRKELAPWFDAGNPLLPADR WLDGDAAFELGGARFEVVRLGPAHSPEDLMVVLPDDGVVFSGDVIFAGRIPFVGEADSRRWLAAIDRLLERRPKLLVAGH GPASRDPATHLALTRDYLRHLRAVMGAAVQDLVPFEEAYAAADWSAYAKLPAFEPANRINAYGTYLTMEREMLEAGRQ
Sequences:
>Translated_318_residues MAPALATLLAALAAAAPAPARAADPVLEPVRLAPRVWLVQGDPGVASAANRGFNSNAAFVVTGDGVVVIDALGTPALGRA LVRAIRKVTRQPIRRVILTHYHADHVYGLGALKAAGAEVWASAEGRAYLEGEEAAKRLEQRRKELAPWFDAGNPLLPADR WLDGDAAFELGGARFEVVRLGPAHSPEDLMVVLPDDGVVFSGDVIFAGRIPFVGEADSRRWLAAIDRLLERRPKLLVAGH GPASRDPATHLALTRDYLRHLRAVMGAAVQDLVPFEEAYAAADWSAYAKLPAFEPANRINAYGTYLTMEREMLEAGRQ >Mature_317_residues APALATLLAALAAAAPAPARAADPVLEPVRLAPRVWLVQGDPGVASAANRGFNSNAAFVVTGDGVVVIDALGTPALGRAL VRAIRKVTRQPIRRVILTHYHADHVYGLGALKAAGAEVWASAEGRAYLEGEEAAKRLEQRRKELAPWFDAGNPLLPADRW LDGDAAFELGGARFEVVRLGPAHSPEDLMVVLPDDGVVFSGDVIFAGRIPFVGEADSRRWLAAIDRLLERRPKLLVAGHG PASRDPATHLALTRDYLRHLRAVMGAAVQDLVPFEEAYAAADWSAYAKLPAFEPANRINAYGTYLTMEREMLEAGRQ
Specific function: Can hydrolyze carbapenem compounds [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 34166; Mature: 34035
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPALATLLAALAAAAPAPARAADPVLEPVRLAPRVWLVQGDPGVASAANRGFNSNAAFV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCEEE VTGDGVVVIDALGTPALGRALVRAIRKVTRQPIRRVILTHYHADHVYGLGALKAAGAEVW EECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCHHHE ASAEGRAYLEGEEAAKRLEQRRKELAPWFDAGNPLLPADRWLDGDAAFELGGARFEVVRL ECCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHEEECCCEEEEEEE GPAHSPEDLMVVLPDDGVVFSGDVIFAGRIPFVGEADSRRWLAAIDRLLERRPKLLVAGH CCCCCCCCEEEEECCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC GPASRDPATHLALTRDYLRHLRAVMGAAVQDLVPFEEAYAAADWSAYAKLPAFEPANRIN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCCCCCHHHHH AYGTYLTMEREMLEAGRQ HHHHEEEEHHHHHHCCCC >Mature Secondary Structure APALATLLAALAAAAPAPARAADPVLEPVRLAPRVWLVQGDPGVASAANRGFNSNAAFV CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCEEE VTGDGVVVIDALGTPALGRALVRAIRKVTRQPIRRVILTHYHADHVYGLGALKAAGAEVW EECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCHHHE ASAEGRAYLEGEEAAKRLEQRRKELAPWFDAGNPLLPADRWLDGDAAFELGGARFEVVRL ECCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHEEECCCEEEEEEE GPAHSPEDLMVVLPDDGVVFSGDVIFAGRIPFVGEADSRRWLAAIDRLLERRPKLLVAGH CCCCCCCCEEEEECCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC GPASRDPATHLALTRDYLRHLRAVMGAAVQDLVPFEEAYAAADWSAYAKLPAFEPANRIN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCCCCCHHHHH AYGTYLTMEREMLEAGRQ HHHHEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1856163 [H]