| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ushA [H]
Identifier: 220916777
GI number: 220916777
Start: 1863579
End: 1865294
Strand: Direct
Name: ushA [H]
Synonym: A2cp1_1672
Alternate gene names: 220916777
Gene position: 1863579-1865294 (Clockwise)
Preceding gene: 220916776
Following gene: 220916778
Centisome position: 37.05
GC content: 72.79
Gene sequence:
>1716_bases ATGGATCGCAGGGAGTTCATGCGGATGCTGGCGGCGGCCGCCGCCGGCGGGATGACCCTTCGCGCGCGCGCGGCGGGTCC GGAGGGCGCGGGGCTGTACGACCTGCCGCGCCACGGCAACGTGAGCCTGCTGCACTTCACCGACGTGCACGCGCAGCTCA TGCCGCTCCACTACCGGGAGCCGGCGGTGAACCTGGGCGCCGGGCCGGCCCGGGGCCGCCCGCCGCACCTGGTCGGGAAG GCGCTCCTCTCGCACTTCGGGATCCGGCCCGGGACGCGCGAGGCGCACGCGCTCACGTTCCTCGACTTCGAGGCGGCGGC GCGGCGGTACGGCAAGGTCGGCGGCTTCGCGCACCTCGCCACGCTGGTGAAGCGCCTCCGGGCCAGCCGCCCCGGCGCGC TGCTGCTCGACGGCGGCGACACCTGGCAGGGCTCGGCCACGGCGCTGTGGACCGACGGCCAGGACATGATCGACGCGGCC AAGCTGCTCGGCGTGGACGTGATGACCGGCCACTGGGAGTTCACGCTCGGCGCCGACCGGGTGAAGCGCGCGGTCGAGAA GGACCTCGCCGGCAAGATCTCGTTCGTCGCCCAGAACGTGCACACCGCCGACTTCGGCGACCCGGTGTTCGAGCCCTGGG TGATGCGCGAGGTGAACGGCGTACCGGTGGCCGTGATCGGGCAGGCGTTCCCGTACACCCCCATCGCGAACCCGCGGTAC CTCGTGCCCGACTGGACGTTCGGGATCGACGAGGAGAACCTCCAGCGCACCGTGGACGAGGCGCGGGCGAAGGGCGCGCG CGTGGTGGTGCTGCTCTCGCACGACGGCATGGACGTGGACCTGAAGCTCGCGTCCCGCGTGAGCGGCATCGACGCGATCC TGGGCGGCCACACGCACGACGGCGTCCCGCGCCCGGTCGCGGTGAAGAACCGCTCCGGCCAGACGCTGGTCACGAACGCG GGCTCGAACGGCAAGTTCCTGGGCGTGCTCGATCTGGACGTCCGCGGTGGGAAGGTGGCGAGCCACCGCTACCGGCTGCT CCCGGTGTTCTCGAACCTGCTCCCGGCCGACCCGGAGATGGCCGCGCACATCGAGCGCGTCCGCGCGCCGTTCCGCGAGA AGCTCGCCGCCCCGCTGGCGGTCACCGAGGGCGTGCTCTACCGGCGCGGCAACTTCAACGGAACGTACGATCAGCTCATC CTGGACGCGCTCATGGCCGAGAAGGACGCCGAGATCGCGTTCTCGCCCGGCTTCCGCTGGGGCGCCTCGCTCCTGCCCGG CGACACCATCACGCAGGAGGACCTGCTCGCGGCCACCGCCATCAGCTACCCGAACGTCGGCGTCAACGACATGACCGGCG CGACGGTGAGGGCGGTGCTCGAGGACGTCTGCGACAACATCTTCAACCCGGACCCCTACTACCAGCAGGGCGGCGACATG GTCCGGGTCGGCGGGCTCGAGTACGCGTGCCACCCCGGCGCGCGGAGCGGGGAGCGCATCCAGGACCTGCGCCTGCGCGG GAAGCCGCTGGAGGCGTCGAAGACGTACCGCGTCGCCACCTGGGCCTCGGTGAGCGAGGCGGCGCGCGACGCCGGCGGCG AGCCGGTCTGGGACGTGGTGGGCCGCTGGCTGCGCGCCCAGAAGACGATCACGCCGCGCACGCCGAACCTGCCGCGCCTG GTCGGCGTGGGCCGGGATCCGGGGATGTCCACCTGA
Upstream 100 bases:
>100_bases GCACCACGCCATCCTCACCGAGGAGCAGATCAGGGATCTGGTCGCGCTGCTCCTCGATCCCGCCTCCCCGGTGAACCAGT AGCGCGGAGCGAGCGAGCCC
Downstream 100 bases:
>100_bases TGGCGCCCGCGCTCGCCACGCTGCTCGCGGCGCTCGCCGCGGCCGCCCCCGCGCCGGCCCGCGCGGCCGATCCCGTCCTC GAGCCGGTCCGGCTCGCGCC
Product: 5'-Nucleotidase domain-containing protein
Products: NA
Alternate protein names: UDP-sugar hydrolase; UDP-sugar diphosphatase; UDP-sugar pyrophosphatase; 5'-nucleotidase; 5'-NT [H]
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MDRREFMRMLAAAAAGGMTLRARAAGPEGAGLYDLPRHGNVSLLHFTDVHAQLMPLHYREPAVNLGAGPARGRPPHLVGK ALLSHFGIRPGTREAHALTFLDFEAAARRYGKVGGFAHLATLVKRLRASRPGALLLDGGDTWQGSATALWTDGQDMIDAA KLLGVDVMTGHWEFTLGADRVKRAVEKDLAGKISFVAQNVHTADFGDPVFEPWVMREVNGVPVAVIGQAFPYTPIANPRY LVPDWTFGIDEENLQRTVDEARAKGARVVVLLSHDGMDVDLKLASRVSGIDAILGGHTHDGVPRPVAVKNRSGQTLVTNA GSNGKFLGVLDLDVRGGKVASHRYRLLPVFSNLLPADPEMAAHIERVRAPFREKLAAPLAVTEGVLYRRGNFNGTYDQLI LDALMAEKDAEIAFSPGFRWGASLLPGDTITQEDLLAATAISYPNVGVNDMTGATVRAVLEDVCDNIFNPDPYYQQGGDM VRVGGLEYACHPGARSGERIQDLRLRGKPLEASKTYRVATWASVSEAARDAGGEPVWDVVGRWLRAQKTITPRTPNLPRL VGVGRDPGMST
Sequences:
>Translated_571_residues MDRREFMRMLAAAAAGGMTLRARAAGPEGAGLYDLPRHGNVSLLHFTDVHAQLMPLHYREPAVNLGAGPARGRPPHLVGK ALLSHFGIRPGTREAHALTFLDFEAAARRYGKVGGFAHLATLVKRLRASRPGALLLDGGDTWQGSATALWTDGQDMIDAA KLLGVDVMTGHWEFTLGADRVKRAVEKDLAGKISFVAQNVHTADFGDPVFEPWVMREVNGVPVAVIGQAFPYTPIANPRY LVPDWTFGIDEENLQRTVDEARAKGARVVVLLSHDGMDVDLKLASRVSGIDAILGGHTHDGVPRPVAVKNRSGQTLVTNA GSNGKFLGVLDLDVRGGKVASHRYRLLPVFSNLLPADPEMAAHIERVRAPFREKLAAPLAVTEGVLYRRGNFNGTYDQLI LDALMAEKDAEIAFSPGFRWGASLLPGDTITQEDLLAATAISYPNVGVNDMTGATVRAVLEDVCDNIFNPDPYYQQGGDM VRVGGLEYACHPGARSGERIQDLRLRGKPLEASKTYRVATWASVSEAARDAGGEPVWDVVGRWLRAQKTITPRTPNLPRL VGVGRDPGMST >Mature_571_residues MDRREFMRMLAAAAAGGMTLRARAAGPEGAGLYDLPRHGNVSLLHFTDVHAQLMPLHYREPAVNLGAGPARGRPPHLVGK ALLSHFGIRPGTREAHALTFLDFEAAARRYGKVGGFAHLATLVKRLRASRPGALLLDGGDTWQGSATALWTDGQDMIDAA KLLGVDVMTGHWEFTLGADRVKRAVEKDLAGKISFVAQNVHTADFGDPVFEPWVMREVNGVPVAVIGQAFPYTPIANPRY LVPDWTFGIDEENLQRTVDEARAKGARVVVLLSHDGMDVDLKLASRVSGIDAILGGHTHDGVPRPVAVKNRSGQTLVTNA GSNGKFLGVLDLDVRGGKVASHRYRLLPVFSNLLPADPEMAAHIERVRAPFREKLAAPLAVTEGVLYRRGNFNGTYDQLI LDALMAEKDAEIAFSPGFRWGASLLPGDTITQEDLLAATAISYPNVGVNDMTGATVRAVLEDVCDNIFNPDPYYQQGGDM VRVGGLEYACHPGARSGERIQDLRLRGKPLEASKTYRVATWASVSEAARDAGGEPVWDVVGRWLRAQKTITPRTPNLPRL VGVGRDPGMST
Specific function: Degradation of external UDP-glucose to uridine monophosphate and glucose-1-phosphate, which can then be used by the cell [H]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Periplasm. Note=Exported from the cell, except a small proportion that is internally localized [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=504, Percent_Identity=23.8095238095238, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1786687, Length=471, Percent_Identity=25.9023354564756, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790658, Length=244, Percent_Identity=28.2786885245902, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.6.1.45; =3.1.3.5 [H]
Molecular weight: Translated: 61736; Mature: 61736
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRREFMRMLAAAAAGGMTLRARAAGPEGAGLYDLPRHGNVSLLHFTDVHAQLMPLHYRE CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCEECCC PAVNLGAGPARGRPPHLVGKALLSHFGIRPGTREAHALTFLDFEAAARRYGKVGGFAHLA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHH TLVKRLRASRPGALLLDGGDTWQGSATALWTDGQDMIDAAKLLGVDVMTGHWEFTLGADR HHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCEEEECCEEEEECHHH VKRAVEKDLAGKISFVAQNVHTADFGDPVFEPWVMREVNGVPVAVIGQAFPYTPIANPRY HHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCE LVPDWTFGIDEENLQRTVDEARAKGARVVVLLSHDGMDVDLKLASRVSGIDAILGGHTHD ECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHHCCHHHHHCCCCCC GVPRPVAVKNRSGQTLVTNAGSNGKFLGVLDLDVRGGKVASHRYRLLPVFSNLLPADPEM CCCCCEEEECCCCCEEEEECCCCCCEEEEEEEECCCCEECCCCEEEEHHHHHCCCCCHHH AAHIERVRAPFREKLAAPLAVTEGVLYRRGNFNGTYDQLILDALMAEKDAEIAFSPGFRW HHHHHHHHHHHHHHHCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC GASLLPGDTITQEDLLAATAISYPNVGVNDMTGATVRAVLEDVCDNIFNPDPYYQQGGDM CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCE VRVGGLEYACHPGARSGERIQDLRLRGKPLEASKTYRVATWASVSEAARDAGGEPVWDVV EEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHH GRWLRAQKTITPRTPNLPRLVGVGRDPGMST HHHHHHCCCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MDRREFMRMLAAAAAGGMTLRARAAGPEGAGLYDLPRHGNVSLLHFTDVHAQLMPLHYRE CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCEECCC PAVNLGAGPARGRPPHLVGKALLSHFGIRPGTREAHALTFLDFEAAARRYGKVGGFAHLA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHH TLVKRLRASRPGALLLDGGDTWQGSATALWTDGQDMIDAAKLLGVDVMTGHWEFTLGADR HHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCEEEECCEEEEECHHH VKRAVEKDLAGKISFVAQNVHTADFGDPVFEPWVMREVNGVPVAVIGQAFPYTPIANPRY HHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCE LVPDWTFGIDEENLQRTVDEARAKGARVVVLLSHDGMDVDLKLASRVSGIDAILGGHTHD ECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHHCCHHHHHCCCCCC GVPRPVAVKNRSGQTLVTNAGSNGKFLGVLDLDVRGGKVASHRYRLLPVFSNLLPADPEM CCCCCEEEECCCCCEEEEECCCCCCEEEEEEEECCCCEECCCCEEEEHHHHHCCCCCHHH AAHIERVRAPFREKLAAPLAVTEGVLYRRGNFNGTYDQLILDALMAEKDAEIAFSPGFRW HHHHHHHHHHHHHHHCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC GASLLPGDTITQEDLLAATAISYPNVGVNDMTGATVRAVLEDVCDNIFNPDPYYQQGGDM CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCE VRVGGLEYACHPGARSGERIQDLRLRGKPLEASKTYRVATWASVSEAARDAGGEPVWDVV EEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHH GRWLRAQKTITPRTPNLPRLVGVGRDPGMST HHHHHHCCCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3012467; 9278503; 9298646; 10331872; 11491293; 11491294 [H]