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The map label for this gene is ybbK [C]

Identifier: 220916697

GI number: 220916697

Start: 1779077

End: 1779856

Strand: Direct

Name: ybbK [C]

Synonym: A2cp1_1591

Alternate gene names: 220916697

Gene position: 1779077-1779856 (Clockwise)

Preceding gene: 220916696

Following gene: 220916698

Centisome position: 35.37

GC content: 68.97

Gene sequence:

>780_bases
ATGCCGCTCCTCGGAGTCGCCGTCCCCGTCGCGCTGGTGGTCATCTGGTTCCTGTCCGGCGTCCGGATCGTGAACGAGTA
CGAGCAGGGCGTGGTGCTGCGGCTGGGGCGCTTCGCCGGGATCCGCACCGCGGGCCTGAAGTGGATCGTCCCGTTCATCG
ACCGGATGATCATCATCGACATGCGCATCACGGCCGAGCAGGTGCCGCCGCAGGACGTGATCACGCGCGACAACGTGTCG
GTGAAGGTGAACGCGGTCATCTACTTCCGCGTGCTGCAGGCCGACCGGGCGTTCCTCCAGGTCACCGACTTCCTGTTCGC
CACCAGCCAGTTCGCGCAGACCACGCTGCGCTCGGTGCTCGGCCAGGTGGAGCTCGACGACCTGCTCAGCCAGCGCGACA
AGATCAACCGGCAGCTCCAGGAGATCATCGACCGGCACACCGAGCCCTGGGGCGTGAAGGTGACCGCGGTGGAGGTCAAG
CAGGTGGACCTCCCCGACGAGATGCGCCGCGCCATGGCCAAGCAGGCCGAGGCGGAGCGCGAGCGGCGGTCGAAGGTCAT
CGCGGCCGAGGGCGAGTACCAGGCCGCGGAGAAGCTGGGCCAGGCGGCCGACGTCATCGCCCGCTCGCCGGGGGCGCTGC
AGCTCCGCTACCTCCAGACGCTGGTCGAGATCTCCGCCGAGAAGAACTCGACCATCGTGTTCCCGCTCCCCCTCGACATC
GTGAAGCCGTTCATGGACGCCGCCGCCCGCCTCCCCGGAGGGCCCAGGACGGAGGGGTGA

Upstream 100 bases:

>100_bases
GGGGCTGACGGTCACGGTGGTGGCCGCCGCGCCCGGGAAGGGCTAGAACGGAGCGCACGCGCGCCGCTCACCCGGGGTGA
CGCCGCGCAGGGAGGAAAGC

Downstream 100 bases:

>100_bases
AATAGGCGCGCGCGGCGCGCGTATGGGCCAGGGTCCGCTCTGGGGAGAGAGGACCCGGTGCGGGGAGCGCGGCGGCGACG
TCGCGCTCCCCCGCGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPLLGVAVPVALVVIWFLSGVRIVNEYEQGVVLRLGRFAGIRTAGLKWIVPFIDRMIIIDMRITAEQVPPQDVITRDNVS
VKVNAVIYFRVLQADRAFLQVTDFLFATSQFAQTTLRSVLGQVELDDLLSQRDKINRQLQEIIDRHTEPWGVKVTAVEVK
QVDLPDEMRRAMAKQAEAERERRSKVIAAEGEYQAAEKLGQAADVIARSPGALQLRYLQTLVEISAEKNSTIVFPLPLDI
VKPFMDAAARLPGGPRTEG

Sequences:

>Translated_259_residues
MPLLGVAVPVALVVIWFLSGVRIVNEYEQGVVLRLGRFAGIRTAGLKWIVPFIDRMIIIDMRITAEQVPPQDVITRDNVS
VKVNAVIYFRVLQADRAFLQVTDFLFATSQFAQTTLRSVLGQVELDDLLSQRDKINRQLQEIIDRHTEPWGVKVTAVEVK
QVDLPDEMRRAMAKQAEAERERRSKVIAAEGEYQAAEKLGQAADVIARSPGALQLRYLQTLVEISAEKNSTIVFPLPLDI
VKPFMDAAARLPGGPRTEG
>Mature_258_residues
PLLGVAVPVALVVIWFLSGVRIVNEYEQGVVLRLGRFAGIRTAGLKWIVPFIDRMIIIDMRITAEQVPPQDVITRDNVSV
KVNAVIYFRVLQADRAFLQVTDFLFATSQFAQTTLRSVLGQVELDDLLSQRDKINRQLQEIIDRHTEPWGVKVTAVEVKQ
VDLPDEMRRAMAKQAEAERERRSKVIAAEGEYQAAEKLGQAADVIARSPGALQLRYLQTLVEISAEKNSTIVFPLPLDIV
KPFMDAAARLPGGPRTEG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=237, Percent_Identity=47.6793248945148, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI221316744, Length=247, Percent_Identity=44.1295546558704, Blast_Score=193, Evalue=1e-49,
Organism=Homo sapiens, GI21686995, Length=247, Percent_Identity=44.1295546558704, Blast_Score=193, Evalue=1e-49,
Organism=Homo sapiens, GI7657615, Length=241, Percent_Identity=33.6099585062241, Blast_Score=141, Evalue=7e-34,
Organism=Homo sapiens, GI7305503, Length=177, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI38016907, Length=63, Percent_Identity=63.4920634920635, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI20149563, Length=144, Percent_Identity=31.9444444444444, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1786697, Length=213, Percent_Identity=38.9671361502347, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1790616, Length=175, Percent_Identity=28, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25153583, Length=227, Percent_Identity=51.1013215859031, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI71987612, Length=227, Percent_Identity=51.1013215859031, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI71987621, Length=227, Percent_Identity=51.1013215859031, Blast_Score=209, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17569499, Length=231, Percent_Identity=48.9177489177489, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17569493, Length=244, Percent_Identity=43.0327868852459, Blast_Score=202, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI193209764, Length=244, Percent_Identity=43.0327868852459, Blast_Score=201, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17570459, Length=227, Percent_Identity=48.0176211453744, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71989948, Length=233, Percent_Identity=46.7811158798283, Blast_Score=195, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17569497, Length=245, Percent_Identity=42.4489795918367, Blast_Score=192, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI193210507, Length=245, Percent_Identity=45.3061224489796, Blast_Score=190, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17570161, Length=245, Percent_Identity=45.3061224489796, Blast_Score=190, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI32566490, Length=218, Percent_Identity=45.8715596330275, Blast_Score=168, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71989955, Length=185, Percent_Identity=45.4054054054054, Blast_Score=143, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI32564147, Length=180, Percent_Identity=34.4444444444444, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71989963, Length=123, Percent_Identity=45.5284552845528, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17542664, Length=153, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45556022, Length=254, Percent_Identity=45.2755905511811, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI18860517, Length=251, Percent_Identity=45.8167330677291, Blast_Score=210, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24657857, Length=245, Percent_Identity=46.530612244898, Blast_Score=196, Evalue=1e-50,
Organism=Drosophila melanogaster, GI62484448, Length=245, Percent_Identity=46.9387755102041, Blast_Score=195, Evalue=2e-50,
Organism=Drosophila melanogaster, GI281365664, Length=245, Percent_Identity=46.9387755102041, Blast_Score=195, Evalue=2e-50,
Organism=Drosophila melanogaster, GI62484274, Length=245, Percent_Identity=46.9387755102041, Blast_Score=195, Evalue=3e-50,
Organism=Drosophila melanogaster, GI28573263, Length=239, Percent_Identity=41.0041841004184, Blast_Score=190, Evalue=6e-49,
Organism=Drosophila melanogaster, GI281361631, Length=247, Percent_Identity=40.080971659919, Blast_Score=187, Evalue=5e-48,
Organism=Drosophila melanogaster, GI281361633, Length=247, Percent_Identity=40.080971659919, Blast_Score=187, Evalue=5e-48,
Organism=Drosophila melanogaster, GI21356845, Length=248, Percent_Identity=35.4838709677419, Blast_Score=177, Evalue=9e-45,
Organism=Drosophila melanogaster, GI281361635, Length=185, Percent_Identity=41.0810810810811, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI45550506, Length=186, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 28944; Mature: 28813

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLGVAVPVALVVIWFLSGVRIVNEYEQGVVLRLGRFAGIRTAGLKWIVPFIDRMIIID
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHCCHHHHHHHHHHEEEEE
MRITAEQVPPQDVITRDNVSVKVNAVIYFRVLQADRAFLQVTDFLFATSQFAQTTLRSVL
EEHHHHHCCCHHHEECCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQVELDDLLSQRDKINRQLQEIIDRHTEPWGVKVTAVEVKQVDLPDEMRRAMAKQAEAER
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHH
ERRSKVIAAEGEYQAAEKLGQAADVIARSPGALQLRYLQTLVEISAEKNSTIVFPLPLDI
HHHHCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHH
VKPFMDAAARLPGGPRTEG
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PLLGVAVPVALVVIWFLSGVRIVNEYEQGVVLRLGRFAGIRTAGLKWIVPFIDRMIIID
CCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHCCHHHHHHHHHHEEEEE
MRITAEQVPPQDVITRDNVSVKVNAVIYFRVLQADRAFLQVTDFLFATSQFAQTTLRSVL
EEHHHHHCCCHHHEECCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQVELDDLLSQRDKINRQLQEIIDRHTEPWGVKVTAVEVKQVDLPDEMRRAMAKQAEAER
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHH
ERRSKVIAAEGEYQAAEKLGQAADVIARSPGALQLRYLQTLVEISAEKNSTIVFPLPLDI
HHHHCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHH
VKPFMDAAARLPGGPRTEG
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]