| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yqeZ [H]
Identifier: 220916696
GI number: 220916696
Start: 1777607
End: 1779022
Strand: Direct
Name: yqeZ [H]
Synonym: A2cp1_1590
Alternate gene names: 220916696
Gene position: 1777607-1779022 (Clockwise)
Preceding gene: 220916695
Following gene: 220916697
Centisome position: 35.34
GC content: 76.98
Gene sequence:
>1416_bases ATGCGCCTCGGCGAGATCGCTCGCGCCACGAGATCCGCCGTTCCCCGCCGCGCCCGCGCCGCGCTGCCGCTGCTGTGCGC CGGGCTCCTCGCCGCCGGCGCCGCCGCGCGCGCCACCGGGGCCGCCGCGCCTCCGGCGTCCCCGGCCGCCAGGCCGGCGC GGGTCCTGTCCGCGACGGTGAAGGGGCCCATCACCGGCGGCACCGTCGAGTACCTCGAGGCGGCCCTGGCGCGCGCCCGC ACCGGCGCGTTCGCGGCGCTGGTGGTGACGCTCGACACGCCCGGCGGCCAGCTCGACGCGACGCGCGAGATCGTCCAGGC CATGCTCGCCACCGAGGTGCCGGTGATCGTGTGGGTCGGCCCGGCCGGCGCGCGGGCCGGCTCGGCCGGCGTGTTCCTCA CGCTCGCGGCCGACGTGGCCGCGATGCACCCGACCTCCAACATCGGCGCGGCGCACCCGGTCACCGGCGCGGGCCGCGAC GTGGCCGAGGAGGCCGGGAAGGACATGGCGAAGAAGGTGGAGAACGACACCGCCGCCTTCGCCCGCAGCGTCGCGGCCGC CCGCGGGCGGAACGCGGACTGGGCCGAGAAGGCGGTGCGCGAGAGCGTGTCGGTCACCGCCGAGGAGGCGCTCCGGCTGA AGGTGGCGGACCTGGTCGCGGCCGACCTCTCCGAGGTGCTCGCGAAGGCCGACGGGCGGAAGGTGGGCCAGGGGGCCTCG GCGCGCGCGCTCCGGGTGGCCGGCGCGGCGATCGAGCCGTACGAGCCGACGGTGCGGCAGCGGCTGCTCGGGTTCCTCGC CGACCCGAACGTCATGGCGATCCTGATGCTGGTGGGGATGCTCGGGATCGCGGTCGAGTTCTACCACCCCGGCATGATCT TCCCGGGCGCGGCGGGCGGCTTCTGCCTGTTCCTCGCGTTCCTCGCCATGCGGGTCATCCCGGTGAACGTGGGGGCGGTG ATCCTGCTCCTCACCGGCGTGGGGCTGCTGGTGGCGGAGGCGTACGTCACCGCGCACGGGCTGGCGGGGCTGGCCGGCGC GGCGTGCCTGGTGCTCGGGACGCTGTTCTTCGTGAACACCTCCGCGCCGGGCGACTGGTTCGACCCCGGCGCGCTGCGGC TGTCACCCTGGGTGATCTGGCCCACGCCGGCCGCCCTGGCGGTCCTGCTCGCGTTCATGGCCTGGAACATCGCGCGGGTG CGGCGCGCGCCCTTGCGCCTGGGTGCGCCCGGCCTGGTGGGCGCGGCCGGCGAGGCGCTCTCCGAGATCGGCCCGGCCGC GGGCGAGGCGTTCGTTCACGGTGAGTACTGGCAGGCCCGCAGCGCCGCGCCCATCCCGAGCGGCGCCGCGGTGCGGGTGG TGGCCGTGGAGGGGCTGACGGTCACGGTGGTGGCCGCCGCGCCCGGGAAGGGCTAG
Upstream 100 bases:
>100_bases CCGCCTATCTCCTGCGCAGCCCCGAGGAGAAGAAGAAGGCATGGGAGGACCTGCAGCTCGTCATGAAGGAGCTGGGCCAG CCGCCGCCCGGGAGGTGAGC
Downstream 100 bases:
>100_bases AACGGAGCGCACGCGCGCCGCTCACCCGGGGTGACGCCGCGCAGGGAGGAAAGCATGCCGCTCCTCGGAGTCGCCGTCCC CGTCGCGCTGGTGGTCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MRLGEIARATRSAVPRRARAALPLLCAGLLAAGAAARATGAAAPPASPAARPARVLSATVKGPITGGTVEYLEAALARAR TGAFAALVVTLDTPGGQLDATREIVQAMLATEVPVIVWVGPAGARAGSAGVFLTLAADVAAMHPTSNIGAAHPVTGAGRD VAEEAGKDMAKKVENDTAAFARSVAAARGRNADWAEKAVRESVSVTAEEALRLKVADLVAADLSEVLAKADGRKVGQGAS ARALRVAGAAIEPYEPTVRQRLLGFLADPNVMAILMLVGMLGIAVEFYHPGMIFPGAAGGFCLFLAFLAMRVIPVNVGAV ILLLTGVGLLVAEAYVTAHGLAGLAGAACLVLGTLFFVNTSAPGDWFDPGALRLSPWVIWPTPAALAVLLAFMAWNIARV RRAPLRLGAPGLVGAAGEALSEIGPAAGEAFVHGEYWQARSAAPIPSGAAVRVVAVEGLTVTVVAAAPGKG
Sequences:
>Translated_471_residues MRLGEIARATRSAVPRRARAALPLLCAGLLAAGAAARATGAAAPPASPAARPARVLSATVKGPITGGTVEYLEAALARAR TGAFAALVVTLDTPGGQLDATREIVQAMLATEVPVIVWVGPAGARAGSAGVFLTLAADVAAMHPTSNIGAAHPVTGAGRD VAEEAGKDMAKKVENDTAAFARSVAAARGRNADWAEKAVRESVSVTAEEALRLKVADLVAADLSEVLAKADGRKVGQGAS ARALRVAGAAIEPYEPTVRQRLLGFLADPNVMAILMLVGMLGIAVEFYHPGMIFPGAAGGFCLFLAFLAMRVIPVNVGAV ILLLTGVGLLVAEAYVTAHGLAGLAGAACLVLGTLFFVNTSAPGDWFDPGALRLSPWVIWPTPAALAVLLAFMAWNIARV RRAPLRLGAPGLVGAAGEALSEIGPAAGEAFVHGEYWQARSAAPIPSGAAVRVVAVEGLTVTVVAAAPGKG >Mature_471_residues MRLGEIARATRSAVPRRARAALPLLCAGLLAAGAAARATGAAAPPASPAARPARVLSATVKGPITGGTVEYLEAALARAR TGAFAALVVTLDTPGGQLDATREIVQAMLATEVPVIVWVGPAGARAGSAGVFLTLAADVAAMHPTSNIGAAHPVTGAGRD VAEEAGKDMAKKVENDTAAFARSVAAARGRNADWAEKAVRESVSVTAEEALRLKVADLVAADLSEVLAKADGRKVGQGAS ARALRVAGAAIEPYEPTVRQRLLGFLADPNVMAILMLVGMLGIAVEFYHPGMIFPGAAGGFCLFLAFLAMRVIPVNVGAV ILLLTGVGLLVAEAYVTAHGLAGLAGAACLVLGTLFFVNTSAPGDWFDPGALRLSPWVIWPTPAALAVLLAFMAWNIARV RRAPLRLGAPGLVGAAGEALSEIGPAAGEAFVHGEYWQARSAAPIPSGAAVRVVAVEGLTVTVVAAAPGKG
Specific function: Unknown
COG id: COG1030
COG function: function code O; Membrane-bound serine protease (ClpP class)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002810 - InterPro: IPR002825 [H]
Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]
EC number: NA
Molecular weight: Translated: 47651; Mature: 47651
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGEIARATRSAVPRRARAALPLLCAGLLAAGAAARATGAAAPPASPAARPARVLSATV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHH KGPITGGTVEYLEAALARARTGAFAALVVTLDTPGGQLDATREIVQAMLATEVPVIVWVG CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEC PAGARAGSAGVFLTLAADVAAMHPTSNIGAAHPVTGAGRDVAEEAGKDMAKKVENDTAAF CCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH ARSVAAARGRNADWAEKAVRESVSVTAEEALRLKVADLVAADLSEVLAKADGRKVGQGAS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ARALRVAGAAIEPYEPTVRQRLLGFLADPNVMAILMLVGMLGIAVEFYHPGMIFPGAAGG CCHHEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHH FCLFLAFLAMRVIPVNVGAVILLLTGVGLLVAEAYVTAHGLAGLAGAACLVLGTLFFVNT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SAPGDWFDPGALRLSPWVIWPTPAALAVLLAFMAWNIARVRRAPLRLGAPGLVGAAGEAL CCCCCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH SEIGPAAGEAFVHGEYWQARSAAPIPSGAAVRVVAVEGLTVTVVAAAPGKG HHCCCCCCCEEEECCHHCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCC >Mature Secondary Structure MRLGEIARATRSAVPRRARAALPLLCAGLLAAGAAARATGAAAPPASPAARPARVLSATV CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHH KGPITGGTVEYLEAALARARTGAFAALVVTLDTPGGQLDATREIVQAMLATEVPVIVWVG CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEC PAGARAGSAGVFLTLAADVAAMHPTSNIGAAHPVTGAGRDVAEEAGKDMAKKVENDTAAF CCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH ARSVAAARGRNADWAEKAVRESVSVTAEEALRLKVADLVAADLSEVLAKADGRKVGQGAS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ARALRVAGAAIEPYEPTVRQRLLGFLADPNVMAILMLVGMLGIAVEFYHPGMIFPGAAGG CCHHEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHH FCLFLAFLAMRVIPVNVGAVILLLTGVGLLVAEAYVTAHGLAGLAGAACLVLGTLFFVNT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SAPGDWFDPGALRLSPWVIWPTPAALAVLLAFMAWNIARVRRAPLRLGAPGLVGAAGEAL CCCCCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH SEIGPAAGEAFVHGEYWQARSAAPIPSGAAVRVVAVEGLTVTVVAAAPGKG HHCCCCCCCEEEECCHHCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]