Click here to switch to the map view.

The map label for this gene is yjeB [C]

Identifier: 220916472

GI number: 220916472

Start: 1530526

End: 1531005

Strand: Reverse

Name: yjeB [C]

Synonym: A2cp1_1366

Alternate gene names: 220916472

Gene position: 1531005-1530526 (Counterclockwise)

Preceding gene: 220916474

Following gene: 220916471

Centisome position: 30.44

GC content: 68.33

Gene sequence:

>480_bases
ATGCAGCACGTACTCCGGATCTCACGGAAGATCGACTACGGCCTGCGGGCCATGATCTACCTGGCGTCGATCCCGCAGGA
CTCCGTCGTCCCGTTCCGCGAGATCGCCCGGCAGATGGACGTGCCGGAGGACTTCCTCGCCAAGATCCTGAAGACCCTGG
TGGACACGGGCCTGGTCCGCTCCACCCGCGGACCGCACGGCGGCTACGCGCTCGCGCGCATGCCCGCCGACATCAGCTTC
CTCGACGTGATCGAGTCGGTGGAGGGCCCGGTGGCCCTCAACGTCTGCCTCGACGGCGAGGATGCCTGCGGCCACTCCAC
CGCGTGCACCATGGTGTCGGTGTGGCGCCTGGGCCAGGAGCGGATGCTCGACGTCTACCGGCAGGCCAAGCTCTCCGAGC
TCGCGTTCAAGCCGGCCGACGACGGCCAGATCGGCCTCGTGCAGCTCCAGCTCCAGTCGTCGGTCCGACCGGCCATTTGA

Upstream 100 bases:

>100_bases
CCCATGAACTGTGCACCTCGAACGTGATAAGATAACCGTCTCTCCAGGTCGGCGCGCGCCCGGAAGGGAGAGGGGCCGGC
GCGCGGAAAGGCGAGCGTTC

Downstream 100 bases:

>100_bases
ACGGGGCTGCGCCCCGCCCCACGGAGCGGAGCTCCGCGGGGCCCCACCCTGCTGCGCGGGGCCCGTGACCTCGCGCGCCC
GCCTTCGCGGGTGCGCGCGA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQHVLRISRKIDYGLRAMIYLASIPQDSVVPFREIARQMDVPEDFLAKILKTLVDTGLVRSTRGPHGGYALARMPADISF
LDVIESVEGPVALNVCLDGEDACGHSTACTMVSVWRLGQERMLDVYRQAKLSELAFKPADDGQIGLVQLQLQSSVRPAI

Sequences:

>Translated_159_residues
MQHVLRISRKIDYGLRAMIYLASIPQDSVVPFREIARQMDVPEDFLAKILKTLVDTGLVRSTRGPHGGYALARMPADISF
LDVIESVEGPVALNVCLDGEDACGHSTACTMVSVWRLGQERMLDVYRQAKLSELAFKPADDGQIGLVQLQLQSSVRPAI
>Mature_159_residues
MQHVLRISRKIDYGLRAMIYLASIPQDSVVPFREIARQMDVPEDFLAKILKTLVDTGLVRSTRGPHGGYALARMPADISF
LDVIESVEGPVALNVCLDGEDACGHSTACTMVSVWRLGQERMLDVYRQAKLSELAFKPADDGQIGLVQLQLQSSVRPAI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17540; Mature: 17540

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHVLRISRKIDYGLRAMIYLASIPQDSVVPFREIARQMDVPEDFLAKILKTLVDTGLVR
CCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
STRGPHGGYALARMPADISFLDVIESVEGPVALNVCLDGEDACGHSTACTMVSVWRLGQE
CCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHH
RMLDVYRQAKLSELAFKPADDGQIGLVQLQLQSSVRPAI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MQHVLRISRKIDYGLRAMIYLASIPQDSVVPFREIARQMDVPEDFLAKILKTLVDTGLVR
CCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
STRGPHGGYALARMPADISFLDVIESVEGPVALNVCLDGEDACGHSTACTMVSVWRLGQE
CCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHH
RMLDVYRQAKLSELAFKPADDGQIGLVQLQLQSSVRPAI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]