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The map label for this gene is 220916461

Identifier: 220916461

GI number: 220916461

Start: 1515475

End: 1516272

Strand: Reverse

Name: 220916461

Synonym: A2cp1_1355

Alternate gene names: NA

Gene position: 1516272-1515475 (Counterclockwise)

Preceding gene: 220916463

Following gene: 220916458

Centisome position: 30.15

GC content: 79.2

Gene sequence:

>798_bases
ATGGTCCGGGAGCCTGCGGTCGCGGGAGCGTTCTACGACGCCCGGGCGGCGACGCTCGCCGCCGAGGTCGACGGCTGGCT
GTCGGCCGGCGCCGCGCCCGCCCCGGCGCTCGCCGTGATGGTGCCGCACGCCGGCTACGTCTACTCGGGGGCGGTGGCCG
GCGCGACGTTCGCGCGCGTGGCGCTGCCGGCGCGCGTCATCGTCCTCGGTCCCAACCACACCGGCCTCGGGCACGCCGGC
GCGGCGCTGTGGCCCGCGGGCGCCTGGCGAACGCCGCTGGGGTCCGTGCCGGTGGACCCGGAGCTCACCGCCGCGCTCGC
CGCCGCGCCCGGCGTCGCCGCCGACCGGCTCGCCCACCTCCGCGAGCACTCGCTCGAGGTCGAGGTGCCGTTCCTGCAGC
GCGCCCGGCCCGACGTCGCCCTCGCGGCGCTGTGCCTGGGGCCGCTGTCGTTCGCCGCCTGCGAGGCGCTCGGGACCGCG
GTGGGGGCGGCGGCGCGGGCGGCCGGCGCGCTGGTGGTCGCGTCGTCGGACATGAGCCACTACCTCCCGGCCGCCGAGGC
CCGCCGGCGCGACCTGCGCGCGCTGGACCGGCTGCTCGCGCTCGACGCCGAGGGGCTCTACGACGTGGTCCGGCGGGAGG
GGATCACCATGTGCGGCATCGTGCCGGCCACGGTGATGCTGGTGGCCGCCCGCGCGCTCGGCGCCACGGGGGCGGAGCTG
GTGCGGTACGCGCACTCCGGCGAGGTGAGCGGCGACGACGACGCGGTGGTGGGCTATGCCGGCGTCGTCGTGCGCTGA

Upstream 100 bases:

>100_bases
CTCGAACGCGACGGTGAGCGCGTCGATCACCGCCTTCGAGTCGTCCACGATGAGGACCTTCCGGCTTCCCATGATCCCGG
GCGTTATACTCGATCCCGCC

Downstream 100 bases:

>100_bases
CGCGAGCCCTTCCGGCGCAGCCGGGGCAGCAGCGCCGCGCCCGCGAGGAGCAGGGCCCCGAGCGCGCCGTCGCCGGCCGT
GCCGCACCCGCCGCCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MVREPAVAGAFYDARAATLAAEVDGWLSAGAAPAPALAVMVPHAGYVYSGAVAGATFARVALPARVIVLGPNHTGLGHAG
AALWPAGAWRTPLGSVPVDPELTAALAAAPGVAADRLAHLREHSLEVEVPFLQRARPDVALAALCLGPLSFAACEALGTA
VGAAARAAGALVVASSDMSHYLPAAEARRRDLRALDRLLALDAEGLYDVVRREGITMCGIVPATVMLVAARALGATGAEL
VRYAHSGEVSGDDDAVVGYAGVVVR

Sequences:

>Translated_265_residues
MVREPAVAGAFYDARAATLAAEVDGWLSAGAAPAPALAVMVPHAGYVYSGAVAGATFARVALPARVIVLGPNHTGLGHAG
AALWPAGAWRTPLGSVPVDPELTAALAAAPGVAADRLAHLREHSLEVEVPFLQRARPDVALAALCLGPLSFAACEALGTA
VGAAARAAGALVVASSDMSHYLPAAEARRRDLRALDRLLALDAEGLYDVVRREGITMCGIVPATVMLVAARALGATGAEL
VRYAHSGEVSGDDDAVVGYAGVVVR
>Mature_265_residues
MVREPAVAGAFYDARAATLAAEVDGWLSAGAAPAPALAVMVPHAGYVYSGAVAGATFARVALPARVIVLGPNHTGLGHAG
AALWPAGAWRTPLGSVPVDPELTAALAAAPGVAADRLAHLREHSLEVEVPFLQRARPDVALAALCLGPLSFAACEALGTA
VGAAARAAGALVVASSDMSHYLPAAEARRRDLRALDRLLALDAEGLYDVVRREGITMCGIVPATVMLVAARALGATGAEL
VRYAHSGEVSGDDDAVVGYAGVVVR

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=286, Percent_Identity=26.2237762237762, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI32566861, Length=267, Percent_Identity=26.5917602996255, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI25146594, Length=270, Percent_Identity=26.2962962962963, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21357419, Length=286, Percent_Identity=27.2727272727273, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 26819; Mature: 26819

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVREPAVAGAFYDARAATLAAEVDGWLSAGAAPAPALAVMVPHAGYVYSGAVAGATFARV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHHHHHH
ALPARVIVLGPNHTGLGHAGAALWPAGAWRTPLGSVPVDPELTAALAAAPGVAADRLAHL
HCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
REHSLEVEVPFLQRARPDVALAALCLGPLSFAACEALGTAVGAAARAAGALVVASSDMSH
HHCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHH
YLPAAEARRRDLRALDRLLALDAEGLYDVVRREGITMCGIVPATVMLVAARALGATGAEL
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHH
VRYAHSGEVSGDDDAVVGYAGVVVR
HHHHHCCCCCCCCCCEEEECCEEEC
>Mature Secondary Structure
MVREPAVAGAFYDARAATLAAEVDGWLSAGAAPAPALAVMVPHAGYVYSGAVAGATFARV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHHHHHH
ALPARVIVLGPNHTGLGHAGAALWPAGAWRTPLGSVPVDPELTAALAAAPGVAADRLAHL
HCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
REHSLEVEVPFLQRARPDVALAALCLGPLSFAACEALGTAVGAAARAAGALVVASSDMSH
HHCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHH
YLPAAEARRRDLRALDRLLALDAEGLYDVVRREGITMCGIVPATVMLVAARALGATGAEL
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHH
VRYAHSGEVSGDDDAVVGYAGVVVR
HHHHHCCCCCCCCCCEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]