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The map label for this gene is glnS [H]

Identifier: 220916456

GI number: 220916456

Start: 1509525

End: 1511858

Strand: Reverse

Name: glnS [H]

Synonym: A2cp1_1350

Alternate gene names: 220916456

Gene position: 1511858-1509525 (Counterclockwise)

Preceding gene: 220916457

Following gene: 220916451

Centisome position: 30.06

GC content: 75.32

Gene sequence:

>2334_bases
ATGAGCGACGCCCCTCGCCCCAGGAACTTCCTCGCGGAGATCGTCGAGGCCGACCTGGCCGCCGGCCGGAACGGCGGCCG
CGTGGTCACCCGCTTCCCGCCCGAGCCCAACGGCTACCTCCACATCGGCCACTCGAAGTCGATCCTGCTCAACTTCGGGC
TGGCCCGGGCCTACGGCGGCCGAACGCACCTCCGGTTCGACGACACGAACCCGGTGACCGAGGAGACCGAGTACGTCGAG
GCGATCCAGGACGACGTCCGGTGGCTGGGCGGCGACTGGGGTGGCCACCTCTACTTCGCCTCCGACTTCTTCGACCGGAT
GTACGCCTGCGCCGAGCGCCTGGTGCGCGAGGGGCTCGCCTACGTGGACACGCAGTCGCAGGAGACGATCCGGGAGCAGC
GCGGCAGCTTCGACCGGCCCGGCGTGAACAGCCCGTTCCGCGACCGCCCGGTCGCCGAGAACCAGGACCTCCTGCGCCGC
ATGAAGGCGGGCGAGTTCCCGGACGGCGCGGCCGTGCTGCGCGCGAAGATCGACATGAGCCACCCCAACGTGCTCATGCG
CGATCCCCTGCTGTACCGAGTCCGCCACGCCCGCCACCACCGGACCGGCGACGCCTGGTGCATCTACCCGATGTACGACT
TCGCGCACCCGCTGGAGGACGCCTGCGAGGGCGTCACGCACTCCATCTGCACGCTGGAGTTCGAGTCCAACCGCGAGCTC
TACGACTGGGTGCTCGACCACACCGGCCCCTGGGACCCGCGCCCGCGGCAGTACGAGTTCGCGCGCCTCGCGCTCGGCTA
CACGGTGATGTCGAAGCGCAAGCTGCTGCGGCTCGTGAACGAGCAGCGCGTGTCGGGCTGGGACGACCCGCGCATGCCCA
CCGTGGCCGGGATGCGCCGGCGCGGCGTGACGGCGGAGGCGCTCCGCGACTTCGCCGATCTCATCGGCGTCGCCAAGAAC
AACAGCCTGGTGGACATCGGCAAGCTCGAGTTCGCCACCCGCGCCGACCTGGAGCGCCGCTCGCCGCGCGCCATGGCGGT
GATCCACCCGCTGGCGGTGTCGATCGAGAACTGGCCCGCCGGCAAGGTCGAGGAGCTCGATCTGCCCTGGTGGCCCGGCG
AGCCGGAGCGCGGGGGCAGCCGCAAGGTGCCGTTCGGCGGCGAGCTGTTCATCGAGCGGGACGACTTCGCGCTCGACCCG
CCCAAGGACTGGAAGCGGCTCGCCCCGGGGCGCGAGGTCCGCCTGGCCGGCGCCTACGTGATCCGCTGCGACGAGGTGGT
GCGCGGCCCGGACGGCGACGTGCGCGCGCTGCGCTGCACCTACGATCCCGCCTCGCGGACCGGCGAGGGCGCGGCCCGGC
GCGCGGGCGGCACGCTGCACTGGGTCCACGCGGGCCTGTCGGTCCCGGCCGAGGTCCGCATGTACGACCGGCTGTTCGCG
GTCGAGCAGCCCGACGCGGAGGAGGACTTCATCGCGACGATCAACCCGGACTCGCTCACGGTCGCGAAGGGCGCCCGCGT
CGAGCCGGCGCTCCGCGACGCCGCGCCCGGCAGCCGCTACCAGTTCCTCCGCCAGGGCTACTTCTTCGCCGACCCGGTGG
ACTCGGTCCCCGGCGCCCCGGTGTGGAACCGGACCATCACGCTGAAGGACACCTGGAGCGCGCGGGCCCGCGAGGCCGCC
GCCGCGCCCCGCCGCGCCCGCGAGCCGCGCCGCGAGGAGCCCGCCGCCGCGCCGGCGGCCCCGGCCGCGCCCCGCCGCAG
CCGCGCCGAGGCGCGCGCGGAGCTCCGCGCCGCGAACCCCGCGCTGGCGGCTCGCCACGCGCACTACCTCTCGGCGCTGC
GGCTCCCCGCCGACGACGCCGACCTCCTCGCCGCCGATCCCGGCACCGCCGCGTACTTCGACGCCGCGATCGCCGCCGGC
GCGCGGCCCGCCACCGCCGCGAAGTGGCTGCTCAACGACCTCGCCGGCCTGGCCGGCGACCGCGACCTCGCCGCGCTCCC
GCTGGACGGCGCCGGCTTCGGCCGGTTCGCGGCGTTGGTGGACGCCGGCCGCCTCACCCCGGCCGCGGCGAAGACGTTGC
TCGGCGAGCTCGCCGCGCGCGGTGGCGAGCCCGAGGCGCGCATGCAGGCGCTCGGGCTGGAGCGCCGCGAGGACGCGGGC
GCGCTCGAGGCCGCGCTGGAGAAGGCGCTCGCCGCGCACGCGGCCGAGGCCGCCCGCTACCGCGCCGGCGAGAAGAAGCT
GCTCGGCGTGCTGCTCGGCGCGGTCATGCGCGAGGCCGGCGGCGCCGCCGACGCGGCCCAGGTCCGCGCGGCCCTGCAGA
AGAAGCTCGGGTAG

Upstream 100 bases:

>100_bases
CGTGGAGGGCGTGGACCTGACGGTCCGGTAGCTGGCCGGGCTCGCGCGGCGCCGCGCGAGGTTGCGGGGCTCGCCCCGGT
GGGATACCACCTCTGGCTGC

Downstream 100 bases:

>100_bases
CCGGGCAGCGGCCGGCGCGCAGCGCGGAGGCGGCCGCGCCGCGGCCCGGACTTGCGCGTGCGCCGCCGCGCGCGCTCACC
GCCGGGAAAAGAAAAACCCC

Product: glutaminyl-tRNA synthetase

Products: NA

Alternate protein names: Glutamine--tRNA ligase; GlnRS [H]

Number of amino acids: Translated: 777; Mature: 776

Protein sequence:

>777_residues
MSDAPRPRNFLAEIVEADLAAGRNGGRVVTRFPPEPNGYLHIGHSKSILLNFGLARAYGGRTHLRFDDTNPVTEETEYVE
AIQDDVRWLGGDWGGHLYFASDFFDRMYACAERLVREGLAYVDTQSQETIREQRGSFDRPGVNSPFRDRPVAENQDLLRR
MKAGEFPDGAAVLRAKIDMSHPNVLMRDPLLYRVRHARHHRTGDAWCIYPMYDFAHPLEDACEGVTHSICTLEFESNREL
YDWVLDHTGPWDPRPRQYEFARLALGYTVMSKRKLLRLVNEQRVSGWDDPRMPTVAGMRRRGVTAEALRDFADLIGVAKN
NSLVDIGKLEFATRADLERRSPRAMAVIHPLAVSIENWPAGKVEELDLPWWPGEPERGGSRKVPFGGELFIERDDFALDP
PKDWKRLAPGREVRLAGAYVIRCDEVVRGPDGDVRALRCTYDPASRTGEGAARRAGGTLHWVHAGLSVPAEVRMYDRLFA
VEQPDAEEDFIATINPDSLTVAKGARVEPALRDAAPGSRYQFLRQGYFFADPVDSVPGAPVWNRTITLKDTWSARAREAA
AAPRRAREPRREEPAAAPAAPAAPRRSRAEARAELRAANPALAARHAHYLSALRLPADDADLLAADPGTAAYFDAAIAAG
ARPATAAKWLLNDLAGLAGDRDLAALPLDGAGFGRFAALVDAGRLTPAAAKTLLGELAARGGEPEARMQALGLERREDAG
ALEAALEKALAAHAAEAARYRAGEKKLLGVLLGAVMREAGGAADAAQVRAALQKKLG

Sequences:

>Translated_777_residues
MSDAPRPRNFLAEIVEADLAAGRNGGRVVTRFPPEPNGYLHIGHSKSILLNFGLARAYGGRTHLRFDDTNPVTEETEYVE
AIQDDVRWLGGDWGGHLYFASDFFDRMYACAERLVREGLAYVDTQSQETIREQRGSFDRPGVNSPFRDRPVAENQDLLRR
MKAGEFPDGAAVLRAKIDMSHPNVLMRDPLLYRVRHARHHRTGDAWCIYPMYDFAHPLEDACEGVTHSICTLEFESNREL
YDWVLDHTGPWDPRPRQYEFARLALGYTVMSKRKLLRLVNEQRVSGWDDPRMPTVAGMRRRGVTAEALRDFADLIGVAKN
NSLVDIGKLEFATRADLERRSPRAMAVIHPLAVSIENWPAGKVEELDLPWWPGEPERGGSRKVPFGGELFIERDDFALDP
PKDWKRLAPGREVRLAGAYVIRCDEVVRGPDGDVRALRCTYDPASRTGEGAARRAGGTLHWVHAGLSVPAEVRMYDRLFA
VEQPDAEEDFIATINPDSLTVAKGARVEPALRDAAPGSRYQFLRQGYFFADPVDSVPGAPVWNRTITLKDTWSARAREAA
AAPRRAREPRREEPAAAPAAPAAPRRSRAEARAELRAANPALAARHAHYLSALRLPADDADLLAADPGTAAYFDAAIAAG
ARPATAAKWLLNDLAGLAGDRDLAALPLDGAGFGRFAALVDAGRLTPAAAKTLLGELAARGGEPEARMQALGLERREDAG
ALEAALEKALAAHAAEAARYRAGEKKLLGVLLGAVMREAGGAADAAQVRAALQKKLG
>Mature_776_residues
SDAPRPRNFLAEIVEADLAAGRNGGRVVTRFPPEPNGYLHIGHSKSILLNFGLARAYGGRTHLRFDDTNPVTEETEYVEA
IQDDVRWLGGDWGGHLYFASDFFDRMYACAERLVREGLAYVDTQSQETIREQRGSFDRPGVNSPFRDRPVAENQDLLRRM
KAGEFPDGAAVLRAKIDMSHPNVLMRDPLLYRVRHARHHRTGDAWCIYPMYDFAHPLEDACEGVTHSICTLEFESNRELY
DWVLDHTGPWDPRPRQYEFARLALGYTVMSKRKLLRLVNEQRVSGWDDPRMPTVAGMRRRGVTAEALRDFADLIGVAKNN
SLVDIGKLEFATRADLERRSPRAMAVIHPLAVSIENWPAGKVEELDLPWWPGEPERGGSRKVPFGGELFIERDDFALDPP
KDWKRLAPGREVRLAGAYVIRCDEVVRGPDGDVRALRCTYDPASRTGEGAARRAGGTLHWVHAGLSVPAEVRMYDRLFAV
EQPDAEEDFIATINPDSLTVAKGARVEPALRDAAPGSRYQFLRQGYFFADPVDSVPGAPVWNRTITLKDTWSARAREAAA
APRRAREPRREEPAAAPAAPAAPRRSRAEARAELRAANPALAARHAHYLSALRLPADDADLLAADPGTAAYFDAAIAAGA
RPATAAKWLLNDLAGLAGDRDLAALPLDGAGFGRFAALVDAGRLTPAAAKTLLGELAARGGEPEARMQALGLERREDAGA
LEAALEKALAAHAAEAARYRAGEKKLLGVLLGAVMREAGGAADAAQVRAALQKKLG

Specific function: Unknown

COG id: COG0008

COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI4826960, Length=552, Percent_Identity=42.7536231884058, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI62241042, Length=538, Percent_Identity=32.8996282527881, Blast_Score=265, Evalue=9e-71,
Organism=Escherichia coli, GI1786895, Length=556, Percent_Identity=53.0575539568345, Blast_Score=616, Evalue=1e-177,
Organism=Escherichia coli, GI1788743, Length=211, Percent_Identity=28.436018957346, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17543332, Length=546, Percent_Identity=39.7435897435897, Blast_Score=388, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17511007, Length=521, Percent_Identity=33.0134357005758, Blast_Score=253, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6324742, Length=568, Percent_Identity=37.8521126760563, Blast_Score=360, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6321192, Length=523, Percent_Identity=34.225621414914, Blast_Score=275, Evalue=1e-74,
Organism=Drosophila melanogaster, GI17864488, Length=535, Percent_Identity=40.3738317757009, Blast_Score=386, Evalue=1e-107,
Organism=Drosophila melanogaster, GI24649466, Length=379, Percent_Identity=38.2585751978892, Blast_Score=233, Evalue=3e-61,

Paralogues:

None

Copy number: 520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1200 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR004514
- InterPro:   IPR022861
- InterPro:   IPR000924
- InterPro:   IPR020061
- InterPro:   IPR020058
- InterPro:   IPR020059
- InterPro:   IPR020056
- InterPro:   IPR011035
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00749 tRNA-synt_1c; PF03950 tRNA-synt_1c_C [H]

EC number: =6.1.1.18 [H]

Molecular weight: Translated: 85279; Mature: 85148

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAPRPRNFLAEIVEADLAAGRNGGRVVTRFPPEPNGYLHIGHSKSILLNFGLARAYGG
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCEEEEECCHHHHCCC
RTHLRFDDTNPVTEETEYVEAIQDDVRWLGGDWGGHLYFASDFFDRMYACAERLVREGLA
CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHH
YVDTQSQETIREQRGSFDRPGVNSPFRDRPVAENQDLLRRMKAGEFPDGAAVLRAKIDMS
HHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCC
HPNVLMRDPLLYRVRHARHHRTGDAWCIYPMYDFAHPLEDACEGVTHSICTLEFESNREL
CCCEECCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHHHCCEEEEEECCCCHH
YDWVLDHTGPWDPRPRQYEFARLALGYTVMSKRKLLRLVNEQRVSGWDDPRMPTVAGMRR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RGVTAEALRDFADLIGVAKNNSLVDIGKLEFATRADLERRSPRAMAVIHPLAVSIENWPA
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEHHHEEECCCCC
GKVEELDLPWWPGEPERGGSRKVPFGGELFIERDDFALDPPKDWKRLAPGREVRLAGAYV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEECEEE
IRCDEVVRGPDGDVRALRCTYDPASRTGEGAARRAGGTLHWVHAGLSVPAEVRMYDRLFA
EEEHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHH
VEQPDAEEDFIATINPDSLTVAKGARVEPALRDAAPGSRYQFLRQGYFFADPVDSVPGAP
CCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCC
VWNRTITLKDTWSARAREAAAAPRRAREPRREEPAAAPAAPAAPRRSRAEARAELRAANP
CCCCEEEEECCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH
ALAARHAHYLSALRLPADDADLLAADPGTAAYFDAAIAAGARPATAAKWLLNDLAGLAGD
HHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
RDLAALPLDGAGFGRFAALVDAGRLTPAAAKTLLGELAARGGEPEARMQALGLERREDAG
CCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH
ALEAALEKALAAHAAEAARYRAGEKKLLGVLLGAVMREAGGAADAAQVRAALQKKLG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDAPRPRNFLAEIVEADLAAGRNGGRVVTRFPPEPNGYLHIGHSKSILLNFGLARAYGG
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCEEEEECCHHHHCCC
RTHLRFDDTNPVTEETEYVEAIQDDVRWLGGDWGGHLYFASDFFDRMYACAERLVREGLA
CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHH
YVDTQSQETIREQRGSFDRPGVNSPFRDRPVAENQDLLRRMKAGEFPDGAAVLRAKIDMS
HHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCC
HPNVLMRDPLLYRVRHARHHRTGDAWCIYPMYDFAHPLEDACEGVTHSICTLEFESNREL
CCCEECCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHHHCCEEEEEECCCCHH
YDWVLDHTGPWDPRPRQYEFARLALGYTVMSKRKLLRLVNEQRVSGWDDPRMPTVAGMRR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RGVTAEALRDFADLIGVAKNNSLVDIGKLEFATRADLERRSPRAMAVIHPLAVSIENWPA
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEHHHEEECCCCC
GKVEELDLPWWPGEPERGGSRKVPFGGELFIERDDFALDPPKDWKRLAPGREVRLAGAYV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEECEEE
IRCDEVVRGPDGDVRALRCTYDPASRTGEGAARRAGGTLHWVHAGLSVPAEVRMYDRLFA
EEEHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHH
VEQPDAEEDFIATINPDSLTVAKGARVEPALRDAAPGSRYQFLRQGYFFADPVDSVPGAP
CCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCC
VWNRTITLKDTWSARAREAAAAPRRAREPRREEPAAAPAAPAAPRRSRAEARAELRAANP
CCCCEEEEECCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH
ALAARHAHYLSALRLPADDADLLAADPGTAAYFDAAIAAGARPATAAKWLLNDLAGLAGD
HHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
RDLAALPLDGAGFGRFAALVDAGRLTPAAAKTLLGELAARGGEPEARMQALGLERREDAG
CCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH
ALEAALEKALAAHAAEAARYRAGEKKLLGVLLGAVMREAGGAADAAQVRAALQKKLG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]