Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220916451
Identifier: 220916451
GI number: 220916451
Start: 1502732
End: 1504960
Strand: Reverse
Name: 220916451
Synonym: A2cp1_1345
Alternate gene names: NA
Gene position: 1504960-1502732 (Counterclockwise)
Preceding gene: 220916456
Following gene: 220916448
Centisome position: 29.92
GC content: 71.96
Gene sequence:
>2229_bases ATGGGAAAGGCGTGGCGTGGATTGGCGCTCGTCGGAACGATCGGCGGGCTTCTGGCGATGGCGGCGGCGGGCGGATGCGG CGACGGGCGCAAGGACAAGGGACCTGGAGGAGGCGGCGGCGGAGGAGGCGGCGGGGGCGGAGGTGGAGGGGCCTCCGCGA GCCAGCTGAACATCACCATCCAGTCGGCCGACGTCCCGGCCACCGGCAATCCCACCGTGACGTTCAAGGTCACCGACGCC GCCGGCAACCCCATCGACCTGCTCGCCGAGATCGCGAACGCCGCGGCGACCGGCACGCCTCCCGCGCCGCGCATGAGCCC GCGCTTCTCGCTCGGGCAGCTCGAGGACGACGGGACCTACACGCACTACTACGAGACCACGGTGAACGCGCAGCCGTACA CCGACGCCGGAGGGACGGCGCAGACGCCGTCGGGCTCCGCCGTGCAGCCCCGCACCGAGCCGCCCACCGGGCCGTTCCCC ACGAGCCAGCTCGCGGCCCAGGGCAACGGCGTCTACACGTACACGTTCTCGGCGCCGACCACGGACGCCGCCAAGCGCGA GCGCGCCCGGACGCACACGGTCGGGATCTGGGCCACGCGGACGGTGAGCGAGGGCACGCCGGCGGCCGAGGTCGCCTACC CGGCCAGCGCGACGTTCAACTTCGTGCCGGGCGGCGGCACGGCGGCGAAGTACGAGACGGTCACCGACGCCGCCTGCAAC GCCTGCCATGGCCGGCTCGAGGCGCACGACCGCCGCATCGGCACGCAGCTCTGCATGACCTGCCACGCCGGCGACAAGGG CACGACCTACGCGGATCCGGAGTCCGGGAACACCATCGACTTCCGGAACATGATCCACCGCATCCACTCCGGCCAGGCGG GCTACCACATCGTCGGCTTCCGGCAGACCGACCACTCCTACGCCGACGTGACGTTCCCCCAGAACATCCGCAACTGCACC ACCTGCCACTCGGGCGCGAACGCGGACGACTGGAAGAACAAGCCGTCCGCGGTGGCGTGCGCGTCCTGCCACTCGAACCT GCGCTTCGACGCGTCGGCCTCCGCCGACTGCACGCAGGGCCACGTCGAGACCGCGGCCTGCAACCACCCGTTCGGCGTGA ACGCGACGGCGAACTGCGCCGGCTGCCACGCCGCCGGCAGCAACCTCGGCCCGGACAAGGTGCACGTGGTGCCCCAGGCC GCCGCCGCCGCGACCTACAAGTACGAGATCGTCGGCGTCACCGTCGGCGCCGACCGCATCCCGATCGTCCAGTACCGCGT GCTGCAGAACGGCGCGGCCATGGCGCTCGACGCGGAGCCGTGGACGCACGGCAACGCCAGCCGCCTGTTCATCGACGTGG GCTGGCCGTCGGTCGAGTACGACAACGCCGGCGCCGGGGAGAACGGCCAGCCGGTCCAGATCAACGCGCTCACCGCCGCC GCGGGCGGCGTCGCGACGCCGGTGGCGGGCCAGACCAACGTCTACCAGGTGACCTCACCCACCGCGCTGCCGGCGGGCGT GGACCAGTTCACGGTCGCGCTGGAGGGCCACCCCGCCATCGCGGATCCGTTCAACGCGGGCCAGTTCCTGCGCGTGCCGG TGACGAACGACGTGAAGTACTTCACCGCCGCGGGCGCTGCCGGCCAGGCGCGCCGGACGGTCGTCGCGGTCGAGAACTGC AACAAGTGCCACAGCGTGCTCAGCGCGCACGGCCAGAACCGCAACGGCACCACGCAGGTGTGCGTGGTCTGCCACAACCC CGCCGGCACCGACGCGGCCCGCGTGCCCGCCGGCGGCACGGTCGAGCCCATCGACTTCAAGGTGCTCGTCCACCAGATCC ACGCCTCCGAGATGAAGCAGAACGAGGTCACGATCTACGGCTTCGGCGGCTCGGCGAACGTCTTCCCGCTCGAGTTCCCG AACCAGATCGGCAACTGCGCGCTGTGCCACGCCGGCACCAGCTACCAGCTGCCGCTGGGCGCCGACGTGAAGGACACCAT CAACCCGGCCGGCGGCACCACGCCGAAGACCATCGCGGTGTGCACCTCCTGCCACGACACCGTGAAGTTCGACGGCTCGG CCGCGCAGAAGTGCGGCCCGGGCGTGATGGGCGACTGCAACCACACCGGCGGGAACCAGACCGGCGACGCGCAGTGCGCC ACCTGCCACGGGCCGGGCACGCTCGCCGACGTGGCGAAGGTCCACCCGATCTCCGCGCCGGCGCAGTAG
Upstream 100 bases:
>100_bases CGAACCGACTCACCCTGGAACGAGCGCGGCTAGGCTCGCAGCGGACGCGTGTGCGCGGGGACGGGGCGTCACGGCTCCGA CACGGAGCCTGGGAGGCAAC
Downstream 100 bases:
>100_bases CGGCGCGCGATCGCGCAGCACCGGGGCCCGGCGGGATCCGTCCTGCCGGGCCCCTCGCGTCTCGCCCGCGCGTCCGCGCT ACTGGACCTCGATCTCCTGG
Product: multiheme cytochrome
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; DeCa-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 742; Mature: 741
Protein sequence:
>742_residues MGKAWRGLALVGTIGGLLAMAAAGGCGDGRKDKGPGGGGGGGGGGGGGGGASASQLNITIQSADVPATGNPTVTFKVTDA AGNPIDLLAEIANAAATGTPPAPRMSPRFSLGQLEDDGTYTHYYETTVNAQPYTDAGGTAQTPSGSAVQPRTEPPTGPFP TSQLAAQGNGVYTYTFSAPTTDAAKRERARTHTVGIWATRTVSEGTPAAEVAYPASATFNFVPGGGTAAKYETVTDAACN ACHGRLEAHDRRIGTQLCMTCHAGDKGTTYADPESGNTIDFRNMIHRIHSGQAGYHIVGFRQTDHSYADVTFPQNIRNCT TCHSGANADDWKNKPSAVACASCHSNLRFDASASADCTQGHVETAACNHPFGVNATANCAGCHAAGSNLGPDKVHVVPQA AAAATYKYEIVGVTVGADRIPIVQYRVLQNGAAMALDAEPWTHGNASRLFIDVGWPSVEYDNAGAGENGQPVQINALTAA AGGVATPVAGQTNVYQVTSPTALPAGVDQFTVALEGHPAIADPFNAGQFLRVPVTNDVKYFTAAGAAGQARRTVVAVENC NKCHSVLSAHGQNRNGTTQVCVVCHNPAGTDAARVPAGGTVEPIDFKVLVHQIHASEMKQNEVTIYGFGGSANVFPLEFP NQIGNCALCHAGTSYQLPLGADVKDTINPAGGTTPKTIAVCTSCHDTVKFDGSAAQKCGPGVMGDCNHTGGNQTGDAQCA TCHGPGTLADVAKVHPISAPAQ
Sequences:
>Translated_742_residues MGKAWRGLALVGTIGGLLAMAAAGGCGDGRKDKGPGGGGGGGGGGGGGGGASASQLNITIQSADVPATGNPTVTFKVTDA AGNPIDLLAEIANAAATGTPPAPRMSPRFSLGQLEDDGTYTHYYETTVNAQPYTDAGGTAQTPSGSAVQPRTEPPTGPFP TSQLAAQGNGVYTYTFSAPTTDAAKRERARTHTVGIWATRTVSEGTPAAEVAYPASATFNFVPGGGTAAKYETVTDAACN ACHGRLEAHDRRIGTQLCMTCHAGDKGTTYADPESGNTIDFRNMIHRIHSGQAGYHIVGFRQTDHSYADVTFPQNIRNCT TCHSGANADDWKNKPSAVACASCHSNLRFDASASADCTQGHVETAACNHPFGVNATANCAGCHAAGSNLGPDKVHVVPQA AAAATYKYEIVGVTVGADRIPIVQYRVLQNGAAMALDAEPWTHGNASRLFIDVGWPSVEYDNAGAGENGQPVQINALTAA AGGVATPVAGQTNVYQVTSPTALPAGVDQFTVALEGHPAIADPFNAGQFLRVPVTNDVKYFTAAGAAGQARRTVVAVENC NKCHSVLSAHGQNRNGTTQVCVVCHNPAGTDAARVPAGGTVEPIDFKVLVHQIHASEMKQNEVTIYGFGGSANVFPLEFP NQIGNCALCHAGTSYQLPLGADVKDTINPAGGTTPKTIAVCTSCHDTVKFDGSAAQKCGPGVMGDCNHTGGNQTGDAQCA TCHGPGTLADVAKVHPISAPAQ >Mature_741_residues GKAWRGLALVGTIGGLLAMAAAGGCGDGRKDKGPGGGGGGGGGGGGGGGASASQLNITIQSADVPATGNPTVTFKVTDAA GNPIDLLAEIANAAATGTPPAPRMSPRFSLGQLEDDGTYTHYYETTVNAQPYTDAGGTAQTPSGSAVQPRTEPPTGPFPT SQLAAQGNGVYTYTFSAPTTDAAKRERARTHTVGIWATRTVSEGTPAAEVAYPASATFNFVPGGGTAAKYETVTDAACNA CHGRLEAHDRRIGTQLCMTCHAGDKGTTYADPESGNTIDFRNMIHRIHSGQAGYHIVGFRQTDHSYADVTFPQNIRNCTT CHSGANADDWKNKPSAVACASCHSNLRFDASASADCTQGHVETAACNHPFGVNATANCAGCHAAGSNLGPDKVHVVPQAA AAATYKYEIVGVTVGADRIPIVQYRVLQNGAAMALDAEPWTHGNASRLFIDVGWPSVEYDNAGAGENGQPVQINALTAAA GGVATPVAGQTNVYQVTSPTALPAGVDQFTVALEGHPAIADPFNAGQFLRVPVTNDVKYFTAAGAAGQARRTVVAVENCN KCHSVLSAHGQNRNGTTQVCVVCHNPAGTDAARVPAGGTVEPIDFKVLVHQIHASEMKQNEVTIYGFGGSANVFPLEFPN QIGNCALCHAGTSYQLPLGADVKDTINPAGGTTPKTIAVCTSCHDTVKFDGSAAQKCGPGVMGDCNHTGGNQTGDAQCAT CHGPGTLADVAKVHPISAPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75790; Mature: 75659
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKAWRGLALVGTIGGLLAMAAAGGCGDGRKDKGPGGGGGGGGGGGGGGGASASQLNITI CCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE QSADVPATGNPTVTFKVTDAAGNPIDLLAEIANAAATGTPPAPRMSPRFSLGQLEDDGTY EECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE THYYETTVNAQPYTDAGGTAQTPSGSAVQPRTEPPTGPFPTSQLAAQGNGVYTYTFSAPT EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCC TDAAKRERARTHTVGIWATRTVSEGTPAAEVAYPASATFNFVPGGGTAAKYETVTDAACN CHHHHHHHHCEEEEEEEEEEEECCCCCCCEEECCCCCEEEEECCCCCCCEEEHHHHHHHH ACHGRLEAHDRRIGTQLCMTCHAGDKGTTYADPESGNTIDFRNMIHRIHSGQAGYHIVGF HHHCCHHHHHHHHCCEEEEEEECCCCCCEECCCCCCCEEHHHHHHHHHHCCCCCEEEEEE RQTDHSYADVTFPQNIRNCTTCHSGANADDWKNKPSAVACASCHSNLRFDASASADCTQG EECCCCEEEEECCHHHCHHHHCCCCCCCHHCCCCCCEEEEEHHCCCCEECCCCCCCCCCC HVETAACNHPFGVNATANCAGCHAAGSNLGPDKVHVVPQAAAAATYKYEIVGVTVGADRI CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHEEEEEEEEEEEECCCCC PIVQYRVLQNGAAMALDAEPWTHGNASRLFIDVGWPSVEYDNAGAGENGQPVQINALTAA CEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCEEEEEEEEEC AGGVATPVAGQTNVYQVTSPTALPAGVDQFTVALEGHPAIADPFNAGQFLRVPVTNDVKY CCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEE FTAAGAAGQARRTVVAVENCNKCHSVLSAHGQNRNGTTQVCVVCHNPAGTDAARVPAGGT EEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC VEPIDFKVLVHQIHASEMKQNEVTIYGFGGSANVFPLEFPNQIGNCALCHAGTSYQLPLG CCCCHHEEHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCCCEEEEECCCCEECCCC ADVKDTINPAGGTTPKTIAVCTSCHDTVKFDGSAAQKCGPGVMGDCNHTGGNQTGDAQCA CCHHHHCCCCCCCCCCEEEEEECCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEE TCHGPGTLADVAKVHPISAPAQ EECCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure GKAWRGLALVGTIGGLLAMAAAGGCGDGRKDKGPGGGGGGGGGGGGGGGASASQLNITI CCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE QSADVPATGNPTVTFKVTDAAGNPIDLLAEIANAAATGTPPAPRMSPRFSLGQLEDDGTY EECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE THYYETTVNAQPYTDAGGTAQTPSGSAVQPRTEPPTGPFPTSQLAAQGNGVYTYTFSAPT EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCC TDAAKRERARTHTVGIWATRTVSEGTPAAEVAYPASATFNFVPGGGTAAKYETVTDAACN CHHHHHHHHCEEEEEEEEEEEECCCCCCCEEECCCCCEEEEECCCCCCCEEEHHHHHHHH ACHGRLEAHDRRIGTQLCMTCHAGDKGTTYADPESGNTIDFRNMIHRIHSGQAGYHIVGF HHHCCHHHHHHHHCCEEEEEEECCCCCCEECCCCCCCEEHHHHHHHHHHCCCCCEEEEEE RQTDHSYADVTFPQNIRNCTTCHSGANADDWKNKPSAVACASCHSNLRFDASASADCTQG EECCCCEEEEECCHHHCHHHHCCCCCCCHHCCCCCCEEEEEHHCCCCEECCCCCCCCCCC HVETAACNHPFGVNATANCAGCHAAGSNLGPDKVHVVPQAAAAATYKYEIVGVTVGADRI CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHEEEEEEEEEEEECCCCC PIVQYRVLQNGAAMALDAEPWTHGNASRLFIDVGWPSVEYDNAGAGENGQPVQINALTAA CEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCEEEEEEEEEC AGGVATPVAGQTNVYQVTSPTALPAGVDQFTVALEGHPAIADPFNAGQFLRVPVTNDVKY CCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEE FTAAGAAGQARRTVVAVENCNKCHSVLSAHGQNRNGTTQVCVVCHNPAGTDAARVPAGGT EEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC VEPIDFKVLVHQIHASEMKQNEVTIYGFGGSANVFPLEFPNQIGNCALCHAGTSYQLPLG CCCCHHEEHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCCCEEEEECCCCEECCCC ADVKDTINPAGGTTPKTIAVCTSCHDTVKFDGSAAQKCGPGVMGDCNHTGGNQTGDAQCA CCHHHHCCCCCCCCCCEEEEEECCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEE TCHGPGTLADVAKVHPISAPAQ EECCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA