Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916393
Identifier: 220916393
GI number: 220916393
Start: 1440065
End: 1441405
Strand: Reverse
Name: 220916393
Synonym: A2cp1_1287
Alternate gene names: NA
Gene position: 1441405-1440065 (Counterclockwise)
Preceding gene: 220916396
Following gene: 220916391
Centisome position: 28.66
GC content: 77.18
Gene sequence:
>1341_bases ATGACCCGACGCCGCGCCCTGCCCTTCCGCCTCCTCGCACTCGGGACCGCCCTCGCGCTCCTGCTCCCGCCGGCCGCCGC CTCGGCGCGGCGCGGCGACCCGCGCCCCGAGCCCTATCCGGCCGTGGTCCAGCGCGTCGCAGGGATGGTCTCGGATCCCG ACGCCCGGCGCGCCGCGCAGGCGCACGGCCTCGACCTCGTGAACGTCACCTGGGAGGACACCGGCCGCTGGCAGGGCTCG TCGCTCGGCCCGAACATCAGCGACGTGACGCTGGAGGTCGTGTCCGAGGACGGGGACGCCCGCAAGCTCGCGCTCATGCC GGTCCTCCGCTTCCCCAACTTCACCGACCGCACCGCCGACGTGCCGCTCGACCGGATCTGGCTGCGGGTGGGGAATGCGC GGGAGAACGGGCGCGAGCGCGTCATCACGCTCCGCGACCTGCTCGCCGATCCGGCGCGCTGGCTGTCCTCGCCGCGCGAC GGCGCCGTCCGCGGCGGCTCGCTGCTCGCGCCGCGCGACACGCACGCGCTCGTGTCGGCGCAGGCGGCGTTCCTGCCGGT GCCGCGCCAGGGCCGCGCGACGTTCCACCCGGTGATCTTCAACTACCAGTCGACCGCGGGCGATCCCGCGGTGCTCACCA TCCTGGTGACGCGCCAGGGCACCTCGATCACCGTGGTGGACAACGCGCGCGACACCGTCTCGGGCGGCGCGAGCTGGGGG CAGCGGCTGTTCTTCAACGCGGGCGGCGAGCGCGCCCCGCTCATCGCCGAGCGCCTCTCCGACGTGCGCGGGCGCGGCAC CACCCTGAACGGCGAGGCCGCCTCCGACCTGGGCGACGACGCGAACGTGCTCATGCTGGTGCAGGTGCCGCTCCGCCGCC GCGAGCCGCCGCGGCGCGCCGAGGCCTACGGGCAGGCGCCCATGGCCGCCGCACCGGCGCCGCAGGCGAAGTCGATGGCC GCGCCGGAGCGGGACCTCGAGACGGCGGTGCTGGGCCACGGCGCGCTGGACGGCCCGTACACCGAGCTGGCCGGGCTCGC CGTCGAGCGCGACCCGCGCTTCCCGGTGCGCGTGACGGTGCAGTTCTACCAGGCGACCGCGACCGGCCGGATCGGCGACG CCGAGGTGGCGCGCCTCGCCGCGCAGATCCGGCGGGTCTACGAGAAGGGCGACTTCGTCGGCTCGCTGGTGGTGCCCGGC CCCGGCGACGCGCGGCGCCCCACCGCGTGGACGCCCGCGCCCCCGCCGCCCCGCTGCGGCGGCTGGGAGCAGGACTTTCC CGGCCTCGCCGAGCGCTGCCGCCGCGACGGCACGCCGCGCCCGGCCGTCGGCGTCCGCTGA
Upstream 100 bases:
>100_bases GTCCGCCCGGCGACCGCCGCCGTCCGCGGCCCGGACGGGCGCTCGCAGATCCATCCCGAGGAAGGTGCGTTCACCCCTGC GAACCACCCGGAGGAACGCC
Downstream 100 bases:
>100_bases CCGGGCCTCGGGCCCGGCCCCGTCGAGCCTCCGCTCGCCCTCGACACGCTCGGGGGCGAGCGGTTCGCGTACGGGCTCAG CTCCGGTAGTCGGCGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTRRRALPFRLLALGTALALLLPPAAASARRGDPRPEPYPAVVQRVAGMVSDPDARRAAQAHGLDLVNVTWEDTGRWQGS SLGPNISDVTLEVVSEDGDARKLALMPVLRFPNFTDRTADVPLDRIWLRVGNARENGRERVITLRDLLADPARWLSSPRD GAVRGGSLLAPRDTHALVSAQAAFLPVPRQGRATFHPVIFNYQSTAGDPAVLTILVTRQGTSITVVDNARDTVSGGASWG QRLFFNAGGERAPLIAERLSDVRGRGTTLNGEAASDLGDDANVLMLVQVPLRRREPPRRAEAYGQAPMAAAPAPQAKSMA APERDLETAVLGHGALDGPYTELAGLAVERDPRFPVRVTVQFYQATATGRIGDAEVARLAAQIRRVYEKGDFVGSLVVPG PGDARRPTAWTPAPPPPRCGGWEQDFPGLAERCRRDGTPRPAVGVR
Sequences:
>Translated_446_residues MTRRRALPFRLLALGTALALLLPPAAASARRGDPRPEPYPAVVQRVAGMVSDPDARRAAQAHGLDLVNVTWEDTGRWQGS SLGPNISDVTLEVVSEDGDARKLALMPVLRFPNFTDRTADVPLDRIWLRVGNARENGRERVITLRDLLADPARWLSSPRD GAVRGGSLLAPRDTHALVSAQAAFLPVPRQGRATFHPVIFNYQSTAGDPAVLTILVTRQGTSITVVDNARDTVSGGASWG QRLFFNAGGERAPLIAERLSDVRGRGTTLNGEAASDLGDDANVLMLVQVPLRRREPPRRAEAYGQAPMAAAPAPQAKSMA APERDLETAVLGHGALDGPYTELAGLAVERDPRFPVRVTVQFYQATATGRIGDAEVARLAAQIRRVYEKGDFVGSLVVPG PGDARRPTAWTPAPPPPRCGGWEQDFPGLAERCRRDGTPRPAVGVR >Mature_445_residues TRRRALPFRLLALGTALALLLPPAAASARRGDPRPEPYPAVVQRVAGMVSDPDARRAAQAHGLDLVNVTWEDTGRWQGSS LGPNISDVTLEVVSEDGDARKLALMPVLRFPNFTDRTADVPLDRIWLRVGNARENGRERVITLRDLLADPARWLSSPRDG AVRGGSLLAPRDTHALVSAQAAFLPVPRQGRATFHPVIFNYQSTAGDPAVLTILVTRQGTSITVVDNARDTVSGGASWGQ RLFFNAGGERAPLIAERLSDVRGRGTTLNGEAASDLGDDANVLMLVQVPLRRREPPRRAEAYGQAPMAAAPAPQAKSMAA PERDLETAVLGHGALDGPYTELAGLAVERDPRFPVRVTVQFYQATATGRIGDAEVARLAAQIRRVYEKGDFVGSLVVPGP GDARRPTAWTPAPPPPRCGGWEQDFPGLAERCRRDGTPRPAVGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47972; Mature: 47841
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRRALPFRLLALGTALALLLPPAAASARRGDPRPEPYPAVVQRVAGMVSDPDARRAAQ CCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH AHGLDLVNVTWEDTGRWQGSSLGPNISDVTLEVVSEDGDARKLALMPVLRFPNFTDRTAD HCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHCCCCCCCCCC VPLDRIWLRVGNARENGRERVITLRDLLADPARWLSSPRDGAVRGGSLLAPRDTHALVSA CCHHHEEEEECCCCCCCHHHEEEHHHHHCCHHHHHCCCCCCCCCCCCEECCCCCHHHHHH QAAFLPVPRQGRATFHPVIFNYQSTAGDPAVLTILVTRQGTSITVVDNARDTVSGGASWG HHHEECCCCCCCCEECEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHC QRLFFNAGGERAPLIAERLSDVRGRGTTLNGEAASDLGDDANVLMLVQVPLRRREPPRRA CEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEECCHHCCCCCHHH EAYGQAPMAAAPAPQAKSMAAPERDLETAVLGHGALDGPYTELAGLAVERDPRFPVRVTV HHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHCEEEECCCCCCEEEEE QFYQATATGRIGDAEVARLAAQIRRVYEKGDFVGSLVVPGPGDARRPTAWTPAPPPPRCG EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC GWEQDFPGLAERCRRDGTPRPAVGVR CCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TRRRALPFRLLALGTALALLLPPAAASARRGDPRPEPYPAVVQRVAGMVSDPDARRAAQ CCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH AHGLDLVNVTWEDTGRWQGSSLGPNISDVTLEVVSEDGDARKLALMPVLRFPNFTDRTAD HCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHCCCCCCCCCC VPLDRIWLRVGNARENGRERVITLRDLLADPARWLSSPRDGAVRGGSLLAPRDTHALVSA CCHHHEEEEECCCCCCCHHHEEEHHHHHCCHHHHHCCCCCCCCCCCCEECCCCCHHHHHH QAAFLPVPRQGRATFHPVIFNYQSTAGDPAVLTILVTRQGTSITVVDNARDTVSGGASWG HHHEECCCCCCCCEECEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHC QRLFFNAGGERAPLIAERLSDVRGRGTTLNGEAASDLGDDANVLMLVQVPLRRREPPRRA CEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEECCHHCCCCCHHH EAYGQAPMAAAPAPQAKSMAAPERDLETAVLGHGALDGPYTELAGLAVERDPRFPVRVTV HHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHCEEEECCCCCCEEEEE QFYQATATGRIGDAEVARLAAQIRRVYEKGDFVGSLVVPGPGDARRPTAWTPAPPPPRCG EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC GWEQDFPGLAERCRRDGTPRPAVGVR CCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA