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The map label for this gene is 220916391

Identifier: 220916391

GI number: 220916391

Start: 1437335

End: 1438558

Strand: Reverse

Name: 220916391

Synonym: A2cp1_1285

Alternate gene names: NA

Gene position: 1438558-1437335 (Counterclockwise)

Preceding gene: 220916393

Following gene: 220916390

Centisome position: 28.6

GC content: 78.19

Gene sequence:

>1224_bases
ATGGCCGCGCCCCCGGTGCTCTGGTTCCTGCTCTGCGCCCAGCTCGCCGCGGGCGGCGGGCCAGCGGTGGTGCGCGAGAT
CTCGGTCACCGGCAACCGGCGCACCGCCACCGCCTATGTCCGGCAGGCGCTCGAGGTGGACGTGGGCGACCGGTTCGACG
GCGACGCCGCCGCGCTCGAGCAGCGCCTGCTCAACCTCCGGCTGTTCAAGGGCGTCCGGGTGACCCCGCGCCCCGACGGC
GAGGGCGGCGTGGCGCTGGAGGTGGACGTCCAGGAGCGCTGGACCCTCCTGCCCATCCCCATGTTCACCTCCTCGGGCGG
GGAGACCGGCGGCGGCCTGCTGCTGGTGGAGTCGAACCTGTTCGGATGGGGGAAGCAGCTCATGGCCGGCGGGACGCTCT
CGACCCGCGGCGCGGCCGGGATGGCCGGCTACTGGGATCGGGAGGTGGCCGGCACCCGCTGGACCGCGGACGCGTTCGCG
ATGCGCCAGGACGCGCGGCGCGAGCGGACCGACGGCGGCGGCGACGTGGTCTACGCCTACCGCGACGCCCGCACCGACCT
GACGGCCGCCATCGGCCGCCGGCTCACCGAGCGGTTGGCCGTGAGCGCCGGCTGGTTCGGCGTGTGGTCGGACGCGAGCG
CCGAGGACGGCTGGGCGCCGCCCGCGCGCGTCGGGCCCGCCCGGGGCCCGGTCGCGGCGGTGGCGTACGACGCGAGCGAC
TTCCACCTCTTCTACGAGCGGGGCGTCACCGCGCGCCTGCGCTACCGGCACGCCGACGCGGCGCTCGCGGGCGGGCGCGA
CCTGCGCCAGGCCGACGCGCGCGCGACGTGGGGCGGCGCGAACCGGCTCGGCCACGCCTGGTCGATCGCGGTGGCGGCCC
AGGGCGTCGAGGGCGACGCCGCGGTGGACGCGCTCCGCCTGGGCGGCGCGCCGGGCGCGCGCGGCTTCCCGACGGGCGGG
CTGTGGGCGGAGCGCGCCGGCACCGCGGCCCTGGAGTACGCGGTGCCGATCTGGCGGCCGCGCTGGGGCGTCGCGACCGG
CGTGGCGCTGCTCGACGCCGGCCTCGTCCGCTGGCGGAGCGACACGACGCGGTACGTCGCCCCGGGGGTGGGCCTGCGGG
TGCACGTCGCCGACGTCGCGCTGCCCGCGCTCGGCCTGGACGTGGCGTGGTCCACCACCGCCCCGGCGCCGATGGCGAGC
TTCGTGGTGGGCTTCCGCATGTGA

Upstream 100 bases:

>100_bases
TTACCACGCCCGGCGGAGCGCGGCTGCGCGCGGGGGCGGCCCGCCGCGGAGCCGCCGCGCGACGCTGGACGGCCGGGAGC
CGCCCGACTAGAAACCCGCG

Downstream 100 bases:

>100_bases
GGGCGCCGCCCGGCGTCTCCTGCGCACCTCCACCTTCACCGAGCGCGCGCCCCCCGGGGCTCGCGCCCTCGCGAAGCCCC
GGGCGCCGGATACAATGCGC

Product: surface antigen variable number repeat-containing protein

Products: NA

Alternate protein names: Outer Membrane Protein/Protective Antigen

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAAPPVLWFLLCAQLAAGGGPAVVREISVTGNRRTATAYVRQALEVDVGDRFDGDAAALEQRLLNLRLFKGVRVTPRPDG
EGGVALEVDVQERWTLLPIPMFTSSGGETGGGLLLVESNLFGWGKQLMAGGTLSTRGAAGMAGYWDREVAGTRWTADAFA
MRQDARRERTDGGGDVVYAYRDARTDLTAAIGRRLTERLAVSAGWFGVWSDASAEDGWAPPARVGPARGPVAAVAYDASD
FHLFYERGVTARLRYRHADAALAGGRDLRQADARATWGGANRLGHAWSIAVAAQGVEGDAAVDALRLGGAPGARGFPTGG
LWAERAGTAALEYAVPIWRPRWGVATGVALLDAGLVRWRSDTTRYVAPGVGLRVHVADVALPALGLDVAWSTTAPAPMAS
FVVGFRM

Sequences:

>Translated_407_residues
MAAPPVLWFLLCAQLAAGGGPAVVREISVTGNRRTATAYVRQALEVDVGDRFDGDAAALEQRLLNLRLFKGVRVTPRPDG
EGGVALEVDVQERWTLLPIPMFTSSGGETGGGLLLVESNLFGWGKQLMAGGTLSTRGAAGMAGYWDREVAGTRWTADAFA
MRQDARRERTDGGGDVVYAYRDARTDLTAAIGRRLTERLAVSAGWFGVWSDASAEDGWAPPARVGPARGPVAAVAYDASD
FHLFYERGVTARLRYRHADAALAGGRDLRQADARATWGGANRLGHAWSIAVAAQGVEGDAAVDALRLGGAPGARGFPTGG
LWAERAGTAALEYAVPIWRPRWGVATGVALLDAGLVRWRSDTTRYVAPGVGLRVHVADVALPALGLDVAWSTTAPAPMAS
FVVGFRM
>Mature_406_residues
AAPPVLWFLLCAQLAAGGGPAVVREISVTGNRRTATAYVRQALEVDVGDRFDGDAAALEQRLLNLRLFKGVRVTPRPDGE
GGVALEVDVQERWTLLPIPMFTSSGGETGGGLLLVESNLFGWGKQLMAGGTLSTRGAAGMAGYWDREVAGTRWTADAFAM
RQDARRERTDGGGDVVYAYRDARTDLTAAIGRRLTERLAVSAGWFGVWSDASAEDGWAPPARVGPARGPVAAVAYDASDF
HLFYERGVTARLRYRHADAALAGGRDLRQADARATWGGANRLGHAWSIAVAAQGVEGDAAVDALRLGGAPGARGFPTGGL
WAERAGTAALEYAVPIWRPRWGVATGVALLDAGLVRWRSDTTRYVAPGVGLRVHVADVALPALGLDVAWSTTAPAPMASF
VVGFRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43037; Mature: 42906

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPPVLWFLLCAQLAAGGGPAVVREISVTGNRRTATAYVRQALEVDVGDRFDGDAAALE
CCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
QRLLNLRLFKGVRVTPRPDGEGGVALEVDVQERWTLLPIPMFTSSGGETGGGLLLVESNL
HHHHHHHHHCCEEECCCCCCCCCEEEEEEHHHCEEEEEEEEEECCCCCCCCEEEEEECCC
FGWGKQLMAGGTLSTRGAAGMAGYWDREVAGTRWTADAFAMRQDARRERTDGGGDVVYAY
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCEEEEE
RDARTDLTAAIGRRLTERLAVSAGWFGVWSDASAEDGWAPPARVGPARGPVAAVAYDASD
ECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
FHLFYERGVTARLRYRHADAALAGGRDLRQADARATWGGANRLGHAWSIAVAAQGVEGDA
EEEEECCCCEEEEEEEECCHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHH
AVDALRLGGAPGARGFPTGGLWAERAGTAALEYAVPIWRPRWGVATGVALLDAGLVRWRS
HHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEECC
DTTRYVAPGVGLRVHVADVALPALGLDVAWSTTAPAPMASFVVGFRM
CCCEEECCCCCEEEEEEHHHHHHHCCEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AAPPVLWFLLCAQLAAGGGPAVVREISVTGNRRTATAYVRQALEVDVGDRFDGDAAALE
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
QRLLNLRLFKGVRVTPRPDGEGGVALEVDVQERWTLLPIPMFTSSGGETGGGLLLVESNL
HHHHHHHHHCCEEECCCCCCCCCEEEEEEHHHCEEEEEEEEEECCCCCCCCEEEEEECCC
FGWGKQLMAGGTLSTRGAAGMAGYWDREVAGTRWTADAFAMRQDARRERTDGGGDVVYAY
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCEEEEE
RDARTDLTAAIGRRLTERLAVSAGWFGVWSDASAEDGWAPPARVGPARGPVAAVAYDASD
ECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
FHLFYERGVTARLRYRHADAALAGGRDLRQADARATWGGANRLGHAWSIAVAAQGVEGDA
EEEEECCCCEEEEEEEECCHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHH
AVDALRLGGAPGARGFPTGGLWAERAGTAALEYAVPIWRPRWGVATGVALLDAGLVRWRS
HHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEECC
DTTRYVAPGVGLRVHVADVALPALGLDVAWSTTAPAPMASFVVGFRM
CCCEEECCCCCEEEEEEHHHHHHHCCEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA