Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220916378
Identifier: 220916378
GI number: 220916378
Start: 1426594
End: 1428294
Strand: Reverse
Name: 220916378
Synonym: A2cp1_1272
Alternate gene names: NA
Gene position: 1428294-1426594 (Counterclockwise)
Preceding gene: 220916379
Following gene: 220916377
Centisome position: 28.4
GC content: 75.07
Gene sequence:
>1701_bases ATGCCCGCCGCGCCTGCCCCGACCGAACCCCGAGCGCTCGACGAGGCCGTCGCCCGCCTGCGCGAGGCCGCGCCGGGCTG GGCCGCCGCCCCGCTCGCCGCGCGTGCGGCGCTCGCGCGCGCCATGCTGGAGGGCGTGGGGCGCACCGCGCGCCGCGCCG TGGAGGCGGCCTGCGCGGCGAAGGGGCTGCCGTCCGACGCGCCGCAGGCCGGCGAGGAGTGGCTCTCCGGTCCCTACGTG ACGGCCCGCATCCTGCGCCAGCTGGAGCGGTCGCTGACGCTGCTCGCGCGGAACGGCAACACGCCGGTGGGCAAGCTCTC GGAGACGGTCGATGGCCGCCTCTCGGTGCAGGTGTTCCCGCTCACGCGCCAGGACAGGCTGCTCCTCGCCGGCGTCCGCG CCGAGGCCCACCTGGTGGAGGGCATGACCGAGGAGCGCCTGCACGAGACGCGCGCCCGGTTCCACAAGGCGCCCGACCAC CAGGGCAAGGTGTGCCTGGTGCTGGGCGCCGGGAACATCAACTCCATCCCGGCGGTGGACGTGGCCGGGAAGCTGTTCAA CGAGGGGAAGGTCTGCGTCCTGAAGATGAACCCGGTGAACGCCTACCTCGGGCCCATCCTCGAGGACGCGTTCTCCCCGG CCATCGCGCGCGGCCTGCTCGCGATCGTGTACGGCGGCGCCGAGGTGGGCAGCTACCTCGCGCACCACCGCGGCGTCGAC GAGGTGCACATCACCGGCTCCGACCGGACGCACGACGCCATCGTGTGGGGGCCGCCCGGGCCCGAGCGCGACGCGCGGCG GTCCAGCGGGACCCCGCTGCTCGCGAAGGAGATCACGAGCGAGCTCGGCAACGTCTCGCCGGTGCTGGTGGTGCCGGGCC CGTGGGACGCGGGCACCCTGCGCTTCCAGGCGGAGAGCGTCGCCGGCATGGTGACGTACAACGCGTCGTTCAACTGCAAC GCCGCCAAGATGCTGGTGCTCCCGCGCGGCTGGCGGCGGCGCGATGCGTTCCTCGCCGCGGTCGAGCACTTCATGGCGCT CTCGCCGGCGCGCCGGGCCTGGTACCCGGGCGCCGCCGACCGCTACCGCGCGCTCACGGAGGGCCGCGCGGCGGTGCGGA GGGTGGGCCAGGGCGAGGGGGCGCTGCCGTGGACGCTCGTGACCGGGCTCGACGCGGACTCCGAGGACCCGGCCTTCGTC ACCGAGCCGTTCTGCTCGATCCTGTCCGAGACGGCGGTCGGCTCCGAGGATCCGGTGGACTTCCTGGAGCAGGCCGTGGC GTTCGCGAACGACCGGCTCTGGGGGACGCTGGCGGCGCACATCGTCGTCCACCCTCGCACCCTGGCCGACCCGTCGCTCG AGGCCGCGCTCCAGCGCGCCATCCGGCGGCTCCGCTACGGCACCGTCGCGGTGAACACCTGGGCCGGCTACGGCTACGGC CTCGGCACCGCGCCCTGGGGCGCGTTCCCGGGCTCGACGCTCGAGGACGTGCAGAGCGGGCGCGGCTTCGTGCACAACAC CGTCATGCTGGAGGGCGTGGAGAAGGTCGTCGTCTGGCACCCGGCGCGGACGTTCCCGAAGCCGCCCTACTTCCCCAGCC ACGCGACCACCGACGCGCTCGGCCGCAGCCTGGTCCGCCTCGAGACCCGCGGCCGCTGGCGCGACCTCCCCGCCGTCGTG CTGGCGGGGATCCGCGGCTGA
Upstream 100 bases:
>100_bases CCCTGCGCCGCGCCGAGCCGGCGTAGCCGCGCCGCGGGGCCCCACGGAGCACGGGCGCGCGGGGCCGGATCTCGCGTAGG CTGCCGGCATGGGAGCCTCG
Downstream 100 bases:
>100_bases GCACCGCACGGGGTCGGGGAGACCCGCATCGACACCCGGTGCGAGTTCTGGTTTGCTCCGGGTGACGGTCGCCGTCTCCG GCCGTCTCCGGGGGGAAGCG
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MPAAPAPTEPRALDEAVARLREAAPGWAAAPLAARAALARAMLEGVGRTARRAVEAACAAKGLPSDAPQAGEEWLSGPYV TARILRQLERSLTLLARNGNTPVGKLSETVDGRLSVQVFPLTRQDRLLLAGVRAEAHLVEGMTEERLHETRARFHKAPDH QGKVCLVLGAGNINSIPAVDVAGKLFNEGKVCVLKMNPVNAYLGPILEDAFSPAIARGLLAIVYGGAEVGSYLAHHRGVD EVHITGSDRTHDAIVWGPPGPERDARRSSGTPLLAKEITSELGNVSPVLVVPGPWDAGTLRFQAESVAGMVTYNASFNCN AAKMLVLPRGWRRRDAFLAAVEHFMALSPARRAWYPGAADRYRALTEGRAAVRRVGQGEGALPWTLVTGLDADSEDPAFV TEPFCSILSETAVGSEDPVDFLEQAVAFANDRLWGTLAAHIVVHPRTLADPSLEAALQRAIRRLRYGTVAVNTWAGYGYG LGTAPWGAFPGSTLEDVQSGRGFVHNTVMLEGVEKVVVWHPARTFPKPPYFPSHATTDALGRSLVRLETRGRWRDLPAVV LAGIRG
Sequences:
>Translated_566_residues MPAAPAPTEPRALDEAVARLREAAPGWAAAPLAARAALARAMLEGVGRTARRAVEAACAAKGLPSDAPQAGEEWLSGPYV TARILRQLERSLTLLARNGNTPVGKLSETVDGRLSVQVFPLTRQDRLLLAGVRAEAHLVEGMTEERLHETRARFHKAPDH QGKVCLVLGAGNINSIPAVDVAGKLFNEGKVCVLKMNPVNAYLGPILEDAFSPAIARGLLAIVYGGAEVGSYLAHHRGVD EVHITGSDRTHDAIVWGPPGPERDARRSSGTPLLAKEITSELGNVSPVLVVPGPWDAGTLRFQAESVAGMVTYNASFNCN AAKMLVLPRGWRRRDAFLAAVEHFMALSPARRAWYPGAADRYRALTEGRAAVRRVGQGEGALPWTLVTGLDADSEDPAFV TEPFCSILSETAVGSEDPVDFLEQAVAFANDRLWGTLAAHIVVHPRTLADPSLEAALQRAIRRLRYGTVAVNTWAGYGYG LGTAPWGAFPGSTLEDVQSGRGFVHNTVMLEGVEKVVVWHPARTFPKPPYFPSHATTDALGRSLVRLETRGRWRDLPAVV LAGIRG >Mature_565_residues PAAPAPTEPRALDEAVARLREAAPGWAAAPLAARAALARAMLEGVGRTARRAVEAACAAKGLPSDAPQAGEEWLSGPYVT ARILRQLERSLTLLARNGNTPVGKLSETVDGRLSVQVFPLTRQDRLLLAGVRAEAHLVEGMTEERLHETRARFHKAPDHQ GKVCLVLGAGNINSIPAVDVAGKLFNEGKVCVLKMNPVNAYLGPILEDAFSPAIARGLLAIVYGGAEVGSYLAHHRGVDE VHITGSDRTHDAIVWGPPGPERDARRSSGTPLLAKEITSELGNVSPVLVVPGPWDAGTLRFQAESVAGMVTYNASFNCNA AKMLVLPRGWRRRDAFLAAVEHFMALSPARRAWYPGAADRYRALTEGRAAVRRVGQGEGALPWTLVTGLDADSEDPAFVT EPFCSILSETAVGSEDPVDFLEQAVAFANDRLWGTLAAHIVVHPRTLADPSLEAALQRAIRRLRYGTVAVNTWAGYGYGL GTAPWGAFPGSTLEDVQSGRGFVHNTVMLEGVEKVVVWHPARTFPKPPYFPSHATTDALGRSLVRLETRGRWRDLPAVVL AGIRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60704; Mature: 60573
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAPAPTEPRALDEAVARLREAAPGWAAAPLAARAALARAMLEGVGRTARRAVEAACAA CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH KGLPSDAPQAGEEWLSGPYVTARILRQLERSLTLLARNGNTPVGKLSETVDGRLSVQVFP CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCEEEEEEEE LTRQDRLLLAGVRAEAHLVEGMTEERLHETRARFHKAPDHQGKVCLVLGAGNINSIPAVD CCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHH VAGKLFNEGKVCVLKMNPVNAYLGPILEDAFSPAIARGLLAIVYGGAEVGSYLAHHRGVD HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC EVHITGSDRTHDAIVWGPPGPERDARRSSGTPLLAKEITSELGNVSPVLVVPGPWDAGTL EEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEE RFQAESVAGMVTYNASFNCNAAKMLVLPRGWRRRDAFLAAVEHFMALSPARRAWYPGAAD EEEECCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHH RYRALTEGRAAVRRVGQGEGALPWTLVTGLDADSEDPAFVTEPFCSILSETAVGSEDPVD HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH FLEQAVAFANDRLWGTLAAHIVVHPRTLADPSLEAALQRAIRRLRYGTVAVNTWAGYGYG HHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCC LGTAPWGAFPGSTLEDVQSGRGFVHNTVMLEGVEKVVVWHPARTFPKPPYFPSHATTDAL CCCCCCCCCCCCHHHHHHCCCCEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHH GRSLVRLETRGRWRDLPAVVLAGIRG HHHHHHHHCCCCCCCCHHHHHHCCCC >Mature Secondary Structure PAAPAPTEPRALDEAVARLREAAPGWAAAPLAARAALARAMLEGVGRTARRAVEAACAA CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH KGLPSDAPQAGEEWLSGPYVTARILRQLERSLTLLARNGNTPVGKLSETVDGRLSVQVFP CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCEEEEEEEE LTRQDRLLLAGVRAEAHLVEGMTEERLHETRARFHKAPDHQGKVCLVLGAGNINSIPAVD CCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHH VAGKLFNEGKVCVLKMNPVNAYLGPILEDAFSPAIARGLLAIVYGGAEVGSYLAHHRGVD HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC EVHITGSDRTHDAIVWGPPGPERDARRSSGTPLLAKEITSELGNVSPVLVVPGPWDAGTL EEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEE RFQAESVAGMVTYNASFNCNAAKMLVLPRGWRRRDAFLAAVEHFMALSPARRAWYPGAAD EEEECCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHH RYRALTEGRAAVRRVGQGEGALPWTLVTGLDADSEDPAFVTEPFCSILSETAVGSEDPVD HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH FLEQAVAFANDRLWGTLAAHIVVHPRTLADPSLEAALQRAIRRLRYGTVAVNTWAGYGYG HHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCC LGTAPWGAFPGSTLEDVQSGRGFVHNTVMLEGVEKVVVWHPARTFPKPPYFPSHATTDAL CCCCCCCCCCCCHHHHHHCCCCEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHH GRSLVRLETRGRWRDLPAVVLAGIRG HHHHHHHHCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA