Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220916377
Identifier: 220916377
GI number: 220916377
Start: 1426008
End: 1426541
Strand: Reverse
Name: 220916377
Synonym: A2cp1_1271
Alternate gene names: NA
Gene position: 1426541-1426008 (Counterclockwise)
Preceding gene: 220916378
Following gene: 220916374
Centisome position: 28.36
GC content: 76.97
Gene sequence:
>534_bases TTGCTCCGGGTGACGGTCGCCGTCTCCGGCCGTCTCCGGGGGGAAGCGTTGAGAGGCTACCTGCTCACGTGGCTCGCGCG GCAGTACCGCGACAGCGACCTGCGGGCGTTCGTGCGCGAGCACCCGCAGGACTGGCTGGTCTGGGAGGCGGGCCCGTGGC GGCCGCCCTCGCGCCGGCGCGAGACGCTGCGCACCGAGGAGGTGCGCTTCGCCGCGACGGCGAAGGAGCCGATCGCCATC GTGCTGGAGCCGGCCGCCGACGGCGCGCCGCTGCGGGTGGGCCGGGCCGCCGGCAACGACATCGTGATCGACGACCCGAC GCTGTCGCGCGTGCACCTCGAGCTGGTGCGCGACGGCGAGGCCCGCTGGCGGGTGGGCGACGTGGGCTCGTCGAACGGCA CGCGCCTCGCGGGCGTGCGGATCGGGCGCGAGCCGGTGCCGCTGCCGGTGGGCGTGGTGCTCGAGGCGGGCGCCGCGCGG CTCAGCCTCTACGACGCCGCTGCCCTGTTCCTGCGCCTGCGCGGCGCCGCCTGA
Upstream 100 bases:
>100_bases CGCTGGCGCGACCTCCCCGCCGTCGTGCTGGCGGGGATCCGCGGCTGAGCACCGCACGGGGTCGGGGAGACCCGCATCGA CACCCGGTGCGAGTTCTGGT
Downstream 100 bases:
>100_bases TCGCTCACCAGATCTCGCAGCGCTCCGCCGCCGGCCGGGCCATGGGCGTCCCCTCCGCGCAGGCGAACGCGCGCGCGAAC TCCGGCAGGTTGGAGAGCGG
Product: FHA domain containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLRVTVAVSGRLRGEALRGYLLTWLARQYRDSDLRAFVREHPQDWLVWEAGPWRPPSRRRETLRTEEVRFAATAKEPIAI VLEPAADGAPLRVGRAAGNDIVIDDPTLSRVHLELVRDGEARWRVGDVGSSNGTRLAGVRIGREPVPLPVGVVLEAGAAR LSLYDAAALFLRLRGAA
Sequences:
>Translated_177_residues MLRVTVAVSGRLRGEALRGYLLTWLARQYRDSDLRAFVREHPQDWLVWEAGPWRPPSRRRETLRTEEVRFAATAKEPIAI VLEPAADGAPLRVGRAAGNDIVIDDPTLSRVHLELVRDGEARWRVGDVGSSNGTRLAGVRIGREPVPLPVGVVLEAGAAR LSLYDAAALFLRLRGAA >Mature_177_residues MLRVTVAVSGRLRGEALRGYLLTWLARQYRDSDLRAFVREHPQDWLVWEAGPWRPPSRRRETLRTEEVRFAATAKEPIAI VLEPAADGAPLRVGRAAGNDIVIDDPTLSRVHLELVRDGEARWRVGDVGSSNGTRLAGVRIGREPVPLPVGVVLEAGAAR LSLYDAAALFLRLRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19504; Mature: 19504
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVTVAVSGRLRGEALRGYLLTWLARQYRDSDLRAFVREHPQDWLVWEAGPWRPPSRRR CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCHHHH ETLRTEEVRFAATAKEPIAIVLEPAADGAPLRVGRAAGNDIVIDDPTLSRVHLELVRDGE HHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCC ARWRVGDVGSSNGTRLAGVRIGREPVPLPVGVVLEAGAARLSLYDAAALFLRLRGAA CEEEEECCCCCCCCEEEEEEECCCCCCCCHHEEEECCCCEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRVTVAVSGRLRGEALRGYLLTWLARQYRDSDLRAFVREHPQDWLVWEAGPWRPPSRRR CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCHHHH ETLRTEEVRFAATAKEPIAIVLEPAADGAPLRVGRAAGNDIVIDDPTLSRVHLELVRDGE HHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCC ARWRVGDVGSSNGTRLAGVRIGREPVPLPVGVVLEAGAARLSLYDAAALFLRLRGAA CEEEEECCCCCCCCEEEEEEECCCCCCCCHHEEEECCCCEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA