Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916303
Identifier: 220916303
GI number: 220916303
Start: 1340969
End: 1341793
Strand: Reverse
Name: 220916303
Synonym: A2cp1_1196
Alternate gene names: NA
Gene position: 1341793-1340969 (Counterclockwise)
Preceding gene: 220916305
Following gene: 220916294
Centisome position: 26.68
GC content: 73.09
Gene sequence:
>825_bases ATGCCGTCCGCCTCAAGCCCTCGCGCGCGCCTGGCCGCGCTCGCCGTCGCCGCGCTCGCCGCCGCGCCCCTCGCCGCCTC CGCCCAGCCGAAGGCCGCGCGCGGCAGGACCGAGGTCACCTGGTACGGCCACGCCGCCTTCGTGGTGACCACGCCCGGCG GCACCGTGCTCGCCATCGACCCGTGGCTCTCGAACCCGAAGGCGCCAGAGCCCGGCCTCGCCGGGAAGCTGCCGAAGGTG GACTACATCCTCGTCAGCCACGGCCACTTCGACCACGTGGGCGACGCCGTCGCGCTCGCGAAGCGCACCGGGGCGAAGCT CATCACGAACTTCGACCTCGGGAGCTCGCTGGTCGCGGCCGGCTACCCGAAGGACCAGGCCGGGATGGACACGCTCGGCA ACATCGGCGGGACGATCCAGGCCGGCGACGCCGCCGTCACCATGGTCACCGCGGTCCACAGCTCCGGGTACGCGGACGAC AAGGGCACCGCGCACCCGGGCGGCAACCCCATGGGCTTCGTGATCCAGGTGAAGGGCGGCCCGACGCTCTACCACACCGG CGACACCGACCTGACGCAGGACATGAAGCAGCTCCCGGAGCGCTTCGGGCGCGTCGACGTGATGCTGACCTGCATCGGCG GCCACTTCACCATGGACCCGAAGGCCGCCGCCATCGCCGTGGGCTACGTGCGCCCGCGCACGGTGGTGCCCATGCACTTC GGCACGTTCCCGGCGATCGCGGGCACGCCGGAGGAGCTGCGGGCGGCGCTGAAGGGCAAGGCCGAGGTGCGGGTGCTCGA GCCGGGCAAGCCGGTGGGGTTCTAG
Upstream 100 bases:
>100_bases GACGCCTACATCCCCGAACGAGTCCGCCCCGCTGCCCGCCGGGGCGCTAGAAGACCGCTTCGTCCGCGCCCGCCCCGGGC GCGTCGAAAGGAGACCTCGG
Downstream 100 bases:
>100_bases CGCGGGGCGGGAGCGCGCCGGCGGATCCGGCGCGCTTCGCCCGCGCGGTCCGAGCCTCATGCCGCCAAGGGGAACATCCC GCGGGTCTGCTTCTCCACCA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPSASSPRARLAALAVAALAAAPLAASAQPKAARGRTEVTWYGHAAFVVTTPGGTVLAIDPWLSNPKAPEPGLAGKLPKV DYILVSHGHFDHVGDAVALAKRTGAKLITNFDLGSSLVAAGYPKDQAGMDTLGNIGGTIQAGDAAVTMVTAVHSSGYADD KGTAHPGGNPMGFVIQVKGGPTLYHTGDTDLTQDMKQLPERFGRVDVMLTCIGGHFTMDPKAAAIAVGYVRPRTVVPMHF GTFPAIAGTPEELRAALKGKAEVRVLEPGKPVGF
Sequences:
>Translated_274_residues MPSASSPRARLAALAVAALAAAPLAASAQPKAARGRTEVTWYGHAAFVVTTPGGTVLAIDPWLSNPKAPEPGLAGKLPKV DYILVSHGHFDHVGDAVALAKRTGAKLITNFDLGSSLVAAGYPKDQAGMDTLGNIGGTIQAGDAAVTMVTAVHSSGYADD KGTAHPGGNPMGFVIQVKGGPTLYHTGDTDLTQDMKQLPERFGRVDVMLTCIGGHFTMDPKAAAIAVGYVRPRTVVPMHF GTFPAIAGTPEELRAALKGKAEVRVLEPGKPVGF >Mature_273_residues PSASSPRARLAALAVAALAAAPLAASAQPKAARGRTEVTWYGHAAFVVTTPGGTVLAIDPWLSNPKAPEPGLAGKLPKVD YILVSHGHFDHVGDAVALAKRTGAKLITNFDLGSSLVAAGYPKDQAGMDTLGNIGGTIQAGDAAVTMVTAVHSSGYADDK GTAHPGGNPMGFVIQVKGGPTLYHTGDTDLTQDMKQLPERFGRVDVMLTCIGGHFTMDPKAAAIAVGYVRPRTVVPMHFG TFPAIAGTPEELRAALKGKAEVRVLEPGKPVGF
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 28222; Mature: 28090
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSASSPRARLAALAVAALAAAPLAASAQPKAARGRTEVTWYGHAAFVVTTPGGTVLAID CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEC PWLSNPKAPEPGLAGKLPKVDYILVSHGHFDHVGDAVALAKRTGAKLITNFDLGSSLVAA CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEC GYPKDQAGMDTLGNIGGTIQAGDAAVTMVTAVHSSGYADDKGTAHPGGNPMGFVIQVKGG CCCCCCCCCHHHHCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC PTLYHTGDTDLTQDMKQLPERFGRVDVMLTCIGGHFTMDPKAAAIAVGYVRPRTVVPMHF CEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEEECCCCCEEEEEEC GTFPAIAGTPEELRAALKGKAEVRVLEPGKPVGF CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure PSASSPRARLAALAVAALAAAPLAASAQPKAARGRTEVTWYGHAAFVVTTPGGTVLAID CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEC PWLSNPKAPEPGLAGKLPKVDYILVSHGHFDHVGDAVALAKRTGAKLITNFDLGSSLVAA CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEC GYPKDQAGMDTLGNIGGTIQAGDAAVTMVTAVHSSGYADDKGTAHPGGNPMGFVIQVKGG CCCCCCCCCHHHHCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC PTLYHTGDTDLTQDMKQLPERFGRVDVMLTCIGGHFTMDPKAAAIAVGYVRPRTVVPMHF CEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCEEEEEECCCCCEEEEEEC GTFPAIAGTPEELRAALKGKAEVRVLEPGKPVGF CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA