| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ydfG [H]
Identifier: 220916305
GI number: 220916305
Start: 1343153
End: 1343917
Strand: Reverse
Name: ydfG [H]
Synonym: A2cp1_1198
Alternate gene names: 220916305
Gene position: 1343917-1343153 (Counterclockwise)
Preceding gene: 220916306
Following gene: 220916303
Centisome position: 26.72
GC content: 73.86
Gene sequence:
>765_bases ATGCCCTACGACCTGACCGACCGCCTCGCCCTCGTCACCGGCGCGACCTCCGGCATCGGCGCCGCCTGCGTGGACGCGCT CGTCGGCGCCGGCGCGCGCGTCGTCGCCGCCGCCCGCCGCGCCGACCGCCTCGACGCGCTCGCCTCCCGCCACGCTGGGC GCGTCCACCCGCTGCTGCTCGACGTGCGCGATCGCGCCGCGGTGGAGGCGAGCCTGGCCACCCTGCCCGCCGGCTGGGGC GAGGTGGAGGTGCTGGTGAACAACGCCGGGCTCGCGCTGGGGATCGAGCCGGCGCAGCGCGCCTCGGTGGACGAGTGGCA GACCATGATCGACACCAACTGCACCGGCCTGGTGGTGGTCACGCGGGCGCTGCTGCCGGGCATGGTGGAGCGCGGCCGCG GCCACGTCGTGAACGTCGCCTCGGTGGCCGGTACGTACCCGTACCCGGGCGGCAACGTCTACGGGGCCACCAAGGCGTTC GTGCGCCAGCTCACGCTCAACCTGAAGGCCGACCTGATCGGCACCGGCGTGCGCGCGACCTCGATCGAGCCGGGCATGGT CGAGACCGAGTTCTCGCTGGTGCGCTTCTCCGGCGACGCTGGCAAGGCGAAGCAGGTGTACCAGGGCATGCAGCCGCTCG GCCCCGAGGACGTGGCGGACGCGATCCTGTGGTGCGTGACCCGCCCGCCACACGTGAACGTGAACGCGCTCGAGCTCATG CCCGAGCGGCAGGCCTTCTCGCCGTTCGCGGTGAAGCGGGGCTAG
Upstream 100 bases:
>100_bases CGGCCCGGGGGCGGCGCGTCCTTCACCGTCGCGCTGCCGCTCGCCGCGCCGGGCGATTCGCCGGGCGCGGCCAGGGCGCT GCGCGGTTAGAATCCGCGCC
Downstream 100 bases:
>100_bases CGGCATCCGCTCCGGGCATCCGCTCGCCCCGAGGCCTCGACGGGCGGGCGGATGCCGCGCGGAGACGCGGCGCTCAGTCG GCCGCGCTCGCCTCGGCGCC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MPYDLTDRLALVTGATSGIGAACVDALVGAGARVVAAARRADRLDALASRHAGRVHPLLLDVRDRAAVEASLATLPAGWG EVEVLVNNAGLALGIEPAQRASVDEWQTMIDTNCTGLVVVTRALLPGMVERGRGHVVNVASVAGTYPYPGGNVYGATKAF VRQLTLNLKADLIGTGVRATSIEPGMVETEFSLVRFSGDAGKAKQVYQGMQPLGPEDVADAILWCVTRPPHVNVNALELM PERQAFSPFAVKRG
Sequences:
>Translated_254_residues MPYDLTDRLALVTGATSGIGAACVDALVGAGARVVAAARRADRLDALASRHAGRVHPLLLDVRDRAAVEASLATLPAGWG EVEVLVNNAGLALGIEPAQRASVDEWQTMIDTNCTGLVVVTRALLPGMVERGRGHVVNVASVAGTYPYPGGNVYGATKAF VRQLTLNLKADLIGTGVRATSIEPGMVETEFSLVRFSGDAGKAKQVYQGMQPLGPEDVADAILWCVTRPPHVNVNALELM PERQAFSPFAVKRG >Mature_253_residues PYDLTDRLALVTGATSGIGAACVDALVGAGARVVAAARRADRLDALASRHAGRVHPLLLDVRDRAAVEASLATLPAGWGE VEVLVNNAGLALGIEPAQRASVDEWQTMIDTNCTGLVVVTRALLPGMVERGRGHVVNVASVAGTYPYPGGNVYGATKAFV RQLTLNLKADLIGTGVRATSIEPGMVETEFSLVRFSGDAGKAKQVYQGMQPLGPEDVADAILWCVTRPPHVNVNALELMP ERQAFSPFAVKRG
Specific function: Catalyzes the NADP-dependent oxidation of L-allo- threonine and L-serine [H]
COG id: COG4221
COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI109715829, Length=249, Percent_Identity=34.5381526104418, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=31.4009661835749, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI7705855, Length=199, Percent_Identity=31.1557788944724, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI7706318, Length=214, Percent_Identity=29.9065420560748, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI40548397, Length=191, Percent_Identity=30.8900523560209, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI214010158, Length=191, Percent_Identity=30.8900523560209, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI214010156, Length=191, Percent_Identity=30.8900523560209, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI22758144, Length=191, Percent_Identity=30.8900523560209, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI7705925, Length=232, Percent_Identity=32.3275862068966, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI150247226, Length=191, Percent_Identity=33.5078534031414, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI22507405, Length=188, Percent_Identity=32.4468085106383, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI7657478, Length=251, Percent_Identity=30.6772908366534, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI19923817, Length=203, Percent_Identity=27.5862068965517, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI32483357, Length=221, Percent_Identity=29.8642533936652, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI157739938, Length=193, Percent_Identity=25.9067357512953, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4557649, Length=184, Percent_Identity=29.8913043478261, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI5031737, Length=236, Percent_Identity=28.8135593220339, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI119392083, Length=207, Percent_Identity=30.9178743961353, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI142976729, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI19743808, Length=191, Percent_Identity=28.7958115183246, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI223718074, Length=195, Percent_Identity=32.3076923076923, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI210032110, Length=193, Percent_Identity=32.1243523316062, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=30.5699481865285, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI50726952, Length=191, Percent_Identity=30.8900523560209, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI10190704, Length=230, Percent_Identity=27.3913043478261, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI126723750, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI226371731, Length=200, Percent_Identity=25.5, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI4758504, Length=192, Percent_Identity=29.6875, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI15277342, Length=236, Percent_Identity=32.2033898305085, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI44680136, Length=212, Percent_Identity=27.8301886792453, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI44680133, Length=212, Percent_Identity=27.8301886792453, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI17738292, Length=212, Percent_Identity=27.8301886792453, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787820, Length=246, Percent_Identity=55.6910569105691, Blast_Score=287, Evalue=4e-79, Organism=Escherichia coli, GI1787335, Length=226, Percent_Identity=29.646017699115, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082100, Length=219, Percent_Identity=32.8767123287671, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786812, Length=243, Percent_Identity=27.1604938271605, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790717, Length=193, Percent_Identity=26.9430051813472, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367175, Length=230, Percent_Identity=28.695652173913, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786701, Length=224, Percent_Identity=29.0178571428571, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI87082160, Length=196, Percent_Identity=26.0204081632653, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788459, Length=187, Percent_Identity=25.668449197861, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17560676, Length=228, Percent_Identity=30.2631578947368, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17560332, Length=246, Percent_Identity=30.0813008130081, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17559104, Length=249, Percent_Identity=28.1124497991968, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562910, Length=244, Percent_Identity=26.6393442622951, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=27.7566539923954, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538486, Length=244, Percent_Identity=27.0491803278689, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562990, Length=240, Percent_Identity=29.5833333333333, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115534694, Length=236, Percent_Identity=30.5084745762712, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562904, Length=245, Percent_Identity=27.3469387755102, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562908, Length=198, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560150, Length=195, Percent_Identity=28.7179487179487, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17562906, Length=198, Percent_Identity=32.3232323232323, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71994600, Length=229, Percent_Identity=27.5109170305677, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551412, Length=254, Percent_Identity=25.1968503937008, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538480, Length=245, Percent_Identity=25.7142857142857, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17563726, Length=245, Percent_Identity=26.1224489795918, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994604, Length=228, Percent_Identity=28.0701754385965, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17536025, Length=233, Percent_Identity=28.3261802575107, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538182, Length=192, Percent_Identity=30.7291666666667, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193204405, Length=202, Percent_Identity=30.1980198019802, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560220, Length=252, Percent_Identity=26.5873015873016, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115534660, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17544670, Length=246, Percent_Identity=24.390243902439, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531453, Length=249, Percent_Identity=27.3092369477912, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI72000259, Length=251, Percent_Identity=26.6932270916335, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536651, Length=228, Percent_Identity=28.0701754385965, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25152911, Length=208, Percent_Identity=31.25, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17561402, Length=203, Percent_Identity=25.615763546798, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71982365, Length=143, Percent_Identity=28.6713286713287, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555706, Length=188, Percent_Identity=29.7872340425532, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=193, Percent_Identity=29.5336787564767, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=258, Percent_Identity=35.6589147286822, Blast_Score=164, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6322227, Length=195, Percent_Identity=27.6923076923077, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322226, Length=188, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322067, Length=186, Percent_Identity=28.494623655914, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI116007236, Length=252, Percent_Identity=38.0952380952381, Blast_Score=137, Evalue=9e-33, Organism=Drosophila melanogaster, GI24663911, Length=253, Percent_Identity=33.9920948616601, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI281364494, Length=255, Percent_Identity=31.7647058823529, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24648693, Length=252, Percent_Identity=34.5238095238095, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI21355889, Length=252, Percent_Identity=34.5238095238095, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24641388, Length=251, Percent_Identity=35.4581673306773, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI21358495, Length=232, Percent_Identity=28.8793103448276, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI28571387, Length=246, Percent_Identity=34.1463414634146, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24641232, Length=253, Percent_Identity=32.4110671936759, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24643142, Length=191, Percent_Identity=36.1256544502618, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI116007234, Length=254, Percent_Identity=34.251968503937, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=31.0204081632653, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI116007238, Length=186, Percent_Identity=37.6344086021505, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI21357041, Length=195, Percent_Identity=32.3076923076923, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571526, Length=191, Percent_Identity=32.9842931937173, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24640442, Length=194, Percent_Identity=29.8969072164948, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648944, Length=247, Percent_Identity=28.7449392712551, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24584748, Length=199, Percent_Identity=27.6381909547739, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI161076933, Length=199, Percent_Identity=27.6381909547739, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24644339, Length=194, Percent_Identity=28.8659793814433, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI116007232, Length=188, Percent_Identity=35.1063829787234, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281364892, Length=203, Percent_Identity=30.0492610837438, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24580925, Length=206, Percent_Identity=30.0970873786408, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24584752, Length=193, Percent_Identity=29.5336787564767, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI17737361, Length=198, Percent_Identity=31.8181818181818, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28574402, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24584744, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355631, Length=229, Percent_Identity=28.82096069869, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355319, Length=230, Percent_Identity=24.7826086956522, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=28.8, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357673, Length=239, Percent_Identity=23.4309623430962, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26705; Mature: 26574
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYDLTDRLALVTGATSGIGAACVDALVGAGARVVAAARRADRLDALASRHAGRVHPLLL CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE DVRDRAAVEASLATLPAGWGEVEVLVNNAGLALGIEPAQRASVDEWQTMIDTNCTGLVVV ECCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHCCHHHHHHHHHCCCCHHHHH TRALLPGMVERGRGHVVNVASVAGTYPYPGGNVYGATKAFVRQLTLNLKADLIGTGVRAT HHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCEEC SIEPGMVETEFSLVRFSGDAGKAKQVYQGMQPLGPEDVADAILWCVTRPPHVNVNALELM CCCCCCEECEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHEEC PERQAFSPFAVKRG CCCCCCCCCCCCCC >Mature Secondary Structure PYDLTDRLALVTGATSGIGAACVDALVGAGARVVAAARRADRLDALASRHAGRVHPLLL CCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE DVRDRAAVEASLATLPAGWGEVEVLVNNAGLALGIEPAQRASVDEWQTMIDTNCTGLVVV ECCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHCCHHHHHHHHHCCCCHHHHH TRALLPGMVERGRGHVVNVASVAGTYPYPGGNVYGATKAFVRQLTLNLKADLIGTGVRAT HHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCEEC SIEPGMVETEFSLVRFSGDAGKAKQVYQGMQPLGPEDVADAILWCVTRPPHVNVNALELM CCCCCCEECEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHEEC PERQAFSPFAVKRG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]