Click here to switch to the map view.

The map label for this gene is yccM [H]

Identifier: 220915924

GI number: 220915924

Start: 909259

End: 910329

Strand: Reverse

Name: yccM [H]

Synonym: A2cp1_0810

Alternate gene names: 220915924

Gene position: 910329-909259 (Counterclockwise)

Preceding gene: 220915925

Following gene: 220915922

Centisome position: 18.1

GC content: 71.99

Gene sequence:

>1071_bases
GTGAACCCGAAGCTCGACGTCCTCCCCACCGCGCTCCCCACCCCGCCCCCGCCCGCCGCCGAGCGCGGCGAGCGCTGGAC
CAACCCGTGGCGCAGCCTCCCCCGGGTCCGGTGGGCGGTGCAGCTCGCCTACCTCGCGTTCCTCCTGCTGGTCGGCTGGC
AGTTCCTGCGCTTCTACGACGCGGTCCGCGGCGGCGGGCCCATCGACGTGGCGCGCCCACCGTCGGTCGAGGCGTTCCTG
CCCATCGCCGCGCTCGTGTCGCTGAAGCGCTTCGTGCTCACGCGCTACTGGGACGAGATCCACCCGGCCGGCCTCACCAT
CCTGCTCGCGGCGCTCGCGACGGCGTTCGTGGCGCGCAAGGCGTTCTGCTCGTGGGTGTGCCCGGTGGGAACGATCTCGC
GCGCGTTCGAGTGGCTGGGGCGCAAGCTCCTGTGGCGCCGCGGCTGGCCGAGCGTACCCCGCTGGCTGGACCTTCCGCTC
GCGTCGCTGAAGTACCTCCTGCTCGGCTTCTTCGTCTGGACGGTGTTCGTCCAGATGCCGCTCGCCGCCATCGAGGGCTT
CATGCAGGCGCCCTACAACGTGGTCGCCGACGCGAAGATGCTGGAGCTGCTCCTCCACCCCTCGACGACCTTCCTCGCCG
TCGTCGGGGTCCTCGCGCTCCTGTCGCTGGTGGTGAAGCACTTCTGGTGCCGGTACCTGTGCCCGTACGGCGCCCTGCTC
GGCGTGGTGAGCTGGTTCTCGCCGGTGTCGGTGCGCCGGGACCCCGAGGCCTGCAACGACTGCCGCGCCTGCACCCGCGC
CTGCCCGAACGAGATCCAGGTCCACACCAAGCTCCGCGTGCTCTCCACCGAGTGCACCGGCTGCATGTCGTGCGTCGCGG
CGTGCACCACGCGCGACTGCCTGGGCGTGACGCGCAAGGGCGCGCGGACGCTCTCGCCGTGGCTCGTGCCCGCGCTGACG
CTCGGGGTGATGATCGGGTTCTGGGCGATCGCCGCGGCGACCGGGTTCTGGCAGACGATCGTGCCGCCCGAGGCGTTCCG
CTGGGCGTACCGGGTGATGGGGATCGGCTAG

Upstream 100 bases:

>100_bases
CGCCGGGGCGCCGGGCGTTGCACCGGCCGAGCCCCCGCCCGATGGTGCTGCCGGGGCCCGCGAGGTAGGTTCGCGCCGCC
CCCGCACCGCAAGGCTCCCC

Downstream 100 bases:

>100_bases
CCGCGCGAGCCCGGCGCGCGGGGCGCGGCCGCGCGCCGCCGGCTGCCCAGCCCGTGCGCGGCCGCGGAGACCGCCACCAC
CGCCGCCAGGGCGAGCGCCC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MNPKLDVLPTALPTPPPPAAERGERWTNPWRSLPRVRWAVQLAYLAFLLLVGWQFLRFYDAVRGGGPIDVARPPSVEAFL
PIAALVSLKRFVLTRYWDEIHPAGLTILLAALATAFVARKAFCSWVCPVGTISRAFEWLGRKLLWRRGWPSVPRWLDLPL
ASLKYLLLGFFVWTVFVQMPLAAIEGFMQAPYNVVADAKMLELLLHPSTTFLAVVGVLALLSLVVKHFWCRYLCPYGALL
GVVSWFSPVSVRRDPEACNDCRACTRACPNEIQVHTKLRVLSTECTGCMSCVAACTTRDCLGVTRKGARTLSPWLVPALT
LGVMIGFWAIAAATGFWQTIVPPEAFRWAYRVMGIG

Sequences:

>Translated_356_residues
MNPKLDVLPTALPTPPPPAAERGERWTNPWRSLPRVRWAVQLAYLAFLLLVGWQFLRFYDAVRGGGPIDVARPPSVEAFL
PIAALVSLKRFVLTRYWDEIHPAGLTILLAALATAFVARKAFCSWVCPVGTISRAFEWLGRKLLWRRGWPSVPRWLDLPL
ASLKYLLLGFFVWTVFVQMPLAAIEGFMQAPYNVVADAKMLELLLHPSTTFLAVVGVLALLSLVVKHFWCRYLCPYGALL
GVVSWFSPVSVRRDPEACNDCRACTRACPNEIQVHTKLRVLSTECTGCMSCVAACTTRDCLGVTRKGARTLSPWLVPALT
LGVMIGFWAIAAATGFWQTIVPPEAFRWAYRVMGIG
>Mature_356_residues
MNPKLDVLPTALPTPPPPAAERGERWTNPWRSLPRVRWAVQLAYLAFLLLVGWQFLRFYDAVRGGGPIDVARPPSVEAFL
PIAALVSLKRFVLTRYWDEIHPAGLTILLAALATAFVARKAFCSWVCPVGTISRAFEWLGRKLLWRRGWPSVPRWLDLPL
ASLKYLLLGFFVWTVFVQMPLAAIEGFMQAPYNVVADAKMLELLLHPSTTFLAVVGVLALLSLVVKHFWCRYLCPYGALL
GVVSWFSPVSVRRDPEACNDCRACTRACPNEIQVHTKLRVLSTECTGCMSCVAACTTRDCLGVTRKGARTLSPWLVPALT
LGVMIGFWAIAAATGFWQTIVPPEAFRWAYRVMGIG

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=339, Percent_Identity=41.8879056047198, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1788532, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39673; Mature: 39673

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKLDVLPTALPTPPPPAAERGERWTNPWRSLPRVRWAVQLAYLAFLLLVGWQFLRFYD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVRGGGPIDVARPPSVEAFLPIAALVSLKRFVLTRYWDEIHPAGLTILLAALATAFVARK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AFCSWVCPVGTISRAFEWLGRKLLWRRGWPSVPRWLDLPLASLKYLLLGFFVWTVFVQMP
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAAIEGFMQAPYNVVADAKMLELLLHPSTTFLAVVGVLALLSLVVKHFWCRYLCPYGALL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVVSWFSPVSVRRDPEACNDCRACTRACPNEIQVHTKLRVLSTECTGCMSCVAACTTRDC
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVTRKGARTLSPWLVPALTLGVMIGFWAIAAATGFWQTIVPPEAFRWAYRVMGIG
HHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPKLDVLPTALPTPPPPAAERGERWTNPWRSLPRVRWAVQLAYLAFLLLVGWQFLRFYD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVRGGGPIDVARPPSVEAFLPIAALVSLKRFVLTRYWDEIHPAGLTILLAALATAFVARK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AFCSWVCPVGTISRAFEWLGRKLLWRRGWPSVPRWLDLPLASLKYLLLGFFVWTVFVQMP
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAAIEGFMQAPYNVVADAKMLELLLHPSTTFLAVVGVLALLSLVVKHFWCRYLCPYGALL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVVSWFSPVSVRRDPEACNDCRACTRACPNEIQVHTKLRVLSTECTGCMSCVAACTTRDC
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVTRKGARTLSPWLVPALTLGVMIGFWAIAAATGFWQTIVPPEAFRWAYRVMGIG
HHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]