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The map label for this gene is yigC [C]

Identifier: 220915523

GI number: 220915523

Start: 453976

End: 455490

Strand: Reverse

Name: yigC [C]

Synonym: A2cp1_0404

Alternate gene names: 220915523

Gene position: 455490-453976 (Counterclockwise)

Preceding gene: 220915525

Following gene: 220915522

Centisome position: 9.06

GC content: 73.27

Gene sequence:

>1515_bases
ATGGCCTACCGCTCGCTGCGTGAGTTCCTCGCCCGGCTCGACGAGGCCGGCGAGCTGGTCCGGATCTCCGAGCCCGTCGA
TCCGGTCCTCGAGATGGCCGCGCTCGCCGACCGCGCCGCCAAGCAGGGCGGCCCGGCGCTCCTGTTCGAGCGCCCCGGGG
CCCTGCCCGTCGCCATGAACCTGTTCGGCACCCGCCGGCGCACCAGCTGGGCGCTCTCCTGCGACGACTTCGAGCAGCAC
GCGGACGCGCTGCGCGCGCTGCTCCGCACCGCGCCGCCCCAGTCGTTCTGGGACAAGCTGAAGATGCTCCCGAAGCTGGG
GAAGCTCGCGGCCATGGCCCCGAAGCACGTCTCCTCCGGCGCCTGCCAGGAGATCGTGGACCGCGAGCCCGACCTCCGCA
CGCTCCCGGTGCTCACCACCTGGCCGCACGACGGCGGCCCGTTCATCACGCTCCCGCAGGTCATCACCCGCGACCCCGAG
ACCGGCATCCGCAACGTGGGCATGTACCGGCTCCAGGTGCTCGGGCCGCGGCGGCTCGCGCTGCACTGGCAGCTCCACAA
GACCGCCACCGCGCACTACCGCGCCTACCAGCAGCGCGGCGAGCGGATGCCGGTGGCCATCGCGCTCGGCGGCGATCCCG
CCCTCACCTACTGCGCCTCGGCGCCCCTGCCGCCCAACGTGGACGAGTACCTGTTCGCCGGGTTCCTGCGCGGCGCCTCG
GTCCACACCGTCACCGGCGTCGCCACCGGGCTCGACGTGCCGGCCGACGCGGACCTCGTCATCGAGGGCTTCGTGGACAC
CTCGGCGCCGCTCGTCCGCGAGGGCCCGTTCGGCGACCACACCGGGTTCTACTCGCTCGCCGACGACTACCCGGCGCTCG
ACGTGGTCGCGATCACCCGCCGCAAGGACGCGGTCTACCCGGCCACCGTGGTGGGCCCGCCGCCCGTCGAGGACCAGTGG
CTGGGCAAGGCCACCGAGCGCATGTTCCTGCCGCTCATGCAGGTCGTGGCGCCCGAGATCGTGGACATCTGCATGCCGGT
GGAGGGCGTCTTCCACAACCTGTGCCTCGTCTCCATCAAGAAGGAGCACCCGGGGCAGGCAAAGAAGGTCATCCACGGGC
TGTGGGGCTCCGGGCAGATGGCGCAGACGAAGACGCTGGTGGTGTTCGACGACGACGTGGACGTGCAGGACGTCCCGCAG
GCCGCCTGGCGCGCGTTCGCGAACGTGGACGTGAAGCGCGACCTCGTGATCGCCGACGGGCCGGTGGACGTGCTCGACCA
CGCCGCCGGCGGGTTCGCCTTCGGCGGGAAGATCGGCGTGGACGCCACGCGCAAGTGGCGCGAGGAGGGCGGGCGCGAGT
GGCCGGAGGTGTGCGTCCACCCCCCCGAGGTGATCGCGCGGATGGACGCGCTCTACGACCGGCTGGTGCCGGGCGCGGCG
CCGCTCCGCCGCCCGCGCATCGCCCCGCCCCCGGCGGCGTCCTGGACGCCGCGCCGCGGAGGGATCCTCCAGTGA

Upstream 100 bases:

>100_bases
CGTCCCGGAATCATGAGGCTCTCCCCGCCGCGGCGGGGCCTCGGGATCCGTTCAACGAACATTGAAACCCCCGGGAACCT
GGGGTACAGATCCGCGCGCC

Downstream 100 bases:

>100_bases
GCGTGAACGTGCCGCTGCCCGGCGAGGCGCACCGCGGCTCCGCGGTCCGGGCCATGTTCGATCGAATCGCCCCGCGCTAC
GACCTGCTGAACCGGGTCAT

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MAYRSLREFLARLDEAGELVRISEPVDPVLEMAALADRAAKQGGPALLFERPGALPVAMNLFGTRRRTSWALSCDDFEQH
ADALRALLRTAPPQSFWDKLKMLPKLGKLAAMAPKHVSSGACQEIVDREPDLRTLPVLTTWPHDGGPFITLPQVITRDPE
TGIRNVGMYRLQVLGPRRLALHWQLHKTATAHYRAYQQRGERMPVAIALGGDPALTYCASAPLPPNVDEYLFAGFLRGAS
VHTVTGVATGLDVPADADLVIEGFVDTSAPLVREGPFGDHTGFYSLADDYPALDVVAITRRKDAVYPATVVGPPPVEDQW
LGKATERMFLPLMQVVAPEIVDICMPVEGVFHNLCLVSIKKEHPGQAKKVIHGLWGSGQMAQTKTLVVFDDDVDVQDVPQ
AAWRAFANVDVKRDLVIADGPVDVLDHAAGGFAFGGKIGVDATRKWREEGGREWPEVCVHPPEVIARMDALYDRLVPGAA
PLRRPRIAPPPAASWTPRRGGILQ

Sequences:

>Translated_504_residues
MAYRSLREFLARLDEAGELVRISEPVDPVLEMAALADRAAKQGGPALLFERPGALPVAMNLFGTRRRTSWALSCDDFEQH
ADALRALLRTAPPQSFWDKLKMLPKLGKLAAMAPKHVSSGACQEIVDREPDLRTLPVLTTWPHDGGPFITLPQVITRDPE
TGIRNVGMYRLQVLGPRRLALHWQLHKTATAHYRAYQQRGERMPVAIALGGDPALTYCASAPLPPNVDEYLFAGFLRGAS
VHTVTGVATGLDVPADADLVIEGFVDTSAPLVREGPFGDHTGFYSLADDYPALDVVAITRRKDAVYPATVVGPPPVEDQW
LGKATERMFLPLMQVVAPEIVDICMPVEGVFHNLCLVSIKKEHPGQAKKVIHGLWGSGQMAQTKTLVVFDDDVDVQDVPQ
AAWRAFANVDVKRDLVIADGPVDVLDHAAGGFAFGGKIGVDATRKWREEGGREWPEVCVHPPEVIARMDALYDRLVPGAA
PLRRPRIAPPPAASWTPRRGGILQ
>Mature_503_residues
AYRSLREFLARLDEAGELVRISEPVDPVLEMAALADRAAKQGGPALLFERPGALPVAMNLFGTRRRTSWALSCDDFEQHA
DALRALLRTAPPQSFWDKLKMLPKLGKLAAMAPKHVSSGACQEIVDREPDLRTLPVLTTWPHDGGPFITLPQVITRDPET
GIRNVGMYRLQVLGPRRLALHWQLHKTATAHYRAYQQRGERMPVAIALGGDPALTYCASAPLPPNVDEYLFAGFLRGASV
HTVTGVATGLDVPADADLVIEGFVDTSAPLVREGPFGDHTGFYSLADDYPALDVVAITRRKDAVYPATVVGPPPVEDQWL
GKATERMFLPLMQVVAPEIVDICMPVEGVFHNLCLVSIKKEHPGQAKKVIHGLWGSGQMAQTKTLVVFDDDVDVQDVPQA
AWRAFANVDVKRDLVIADGPVDVLDHAAGGFAFGGKIGVDATRKWREEGGREWPEVCVHPPEVIARMDALYDRLVPGAAP
LRRPRIAPPPAASWTPRRGGILQ

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=488, Percent_Identity=39.7540983606557, Blast_Score=357, Evalue=1e-99,
Organism=Saccharomyces cerevisiae, GI6320748, Length=428, Percent_Identity=25, Blast_Score=77, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55071; Mature: 54940

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRSLREFLARLDEAGELVRISEPVDPVLEMAALADRAAKQGGPALLFERPGALPVAMN
CCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHH
LFGTRRRTSWALSCDDFEQHADALRALLRTAPPQSFWDKLKMLPKLGKLAAMAPKHVSSG
HHCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ACQEIVDREPDLRTLPVLTTWPHDGGPFITLPQVITRDPETGIRNVGMYRLQVLGPRRLA
HHHHHHCCCCCCEEECEEEECCCCCCCEEECCHHHCCCCCHHHHHCCEEEEEEECCCEEE
LHWQLHKTATAHYRAYQQRGERMPVAIALGGDPALTYCASAPLPPNVDEYLFAGFLRGAS
EEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHEECCCCCCCHHHHHHHHHHCCCC
VHTVTGVATGLDVPADADLVIEGFVDTSAPLVREGPFGDHTGFYSLADDYPALDVVAITR
EEEEHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCEECCCCCCCEEEEEEEC
RKDAVYPATVVGPPPVEDQWLGKATERMFLPLMQVVAPEIVDICMPVEGVFHNLCLVSIK
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEEEE
KEHPGQAKKVIHGLWGSGQMAQTKTLVVFDDDVDVQDVPQAAWRAFANVDVKRDLVIADG
CCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECC
PVDVLDHAAGGFAFGGKIGVDATRKWREEGGREWPEVCVHPPEVIARMDALYDRLVPGAA
CHHHHHCCCCCEECCCEECCCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCC
PLRRPRIAPPPAASWTPRRGGILQ
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AYRSLREFLARLDEAGELVRISEPVDPVLEMAALADRAAKQGGPALLFERPGALPVAMN
CHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHH
LFGTRRRTSWALSCDDFEQHADALRALLRTAPPQSFWDKLKMLPKLGKLAAMAPKHVSSG
HHCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ACQEIVDREPDLRTLPVLTTWPHDGGPFITLPQVITRDPETGIRNVGMYRLQVLGPRRLA
HHHHHHCCCCCCEEECEEEECCCCCCCEEECCHHHCCCCCHHHHHCCEEEEEEECCCEEE
LHWQLHKTATAHYRAYQQRGERMPVAIALGGDPALTYCASAPLPPNVDEYLFAGFLRGAS
EEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHEECCCCCCCHHHHHHHHHHCCCC
VHTVTGVATGLDVPADADLVIEGFVDTSAPLVREGPFGDHTGFYSLADDYPALDVVAITR
EEEEHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCEECCCCCCCEEEEEEEC
RKDAVYPATVVGPPPVEDQWLGKATERMFLPLMQVVAPEIVDICMPVEGVFHNLCLVSIK
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEEEE
KEHPGQAKKVIHGLWGSGQMAQTKTLVVFDDDVDVQDVPQAAWRAFANVDVKRDLVIADG
CCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECC
PVDVLDHAAGGFAFGGKIGVDATRKWREEGGREWPEVCVHPPEVIARMDALYDRLVPGAA
CHHHHHCCCCCEECCCEECCCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCC
PLRRPRIAPPPAASWTPRRGGILQ
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]