Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220915276
Identifier: 220915276
GI number: 220915276
Start: 173205
End: 174446
Strand: Reverse
Name: 220915276
Synonym: A2cp1_0155
Alternate gene names: NA
Gene position: 174446-173205 (Counterclockwise)
Preceding gene: 220915277
Following gene: 220915262
Centisome position: 3.47
GC content: 79.47
Gene sequence:
>1242_bases ATGTCTCTGCCGTTCCGCCGTGCGGCGGTCCTCCTGCTCGCTGCGGCCTGCACCCCCTCCACCGCTCCTGCGCCCGCCCC GGCGGCGCCGCAGGCGAACCATGTCGCGCGCGGGACGATCACCCCGGCCCGCTACGTCCCGCCGCCCGCCCGCGGGTCGC GCGCTCGCCCCGAGGCGTGCCTGCCCGGCGAGCCGTTCGCGGCCCCGAGCGCGCTCGCCGAGGAGGCGGTCGCGGCGCTG GACGCGGGCGCCCGGGAGCGCGCGCTCGCCTGCGCCGACGAGGCGCTGCGGCTCGCGCCGCGGATGGTGCCGGCGCTCAC CGCGCGCGGCGCCGCGCTCGCCGCGCTCGACCGGCTCGACGAGGCGCGCCTCGCCTTCGCGCGCGCGCTGGCGGTGGATC CGGACGAGCCGGAGGCGCTGCTCGGCGCGGCCGAGCTGCACGTCCGCCGGCTGGGCGCCGCCCGCGACGCGCTCGAGGCC GGCCTCGAGTACGCGGTGCGCGGCGCGCGCAGCGCCACCCGCCCCCCGCGCAAGGACAAGGACCTCGCCGCGCGGCTCGA GCTGGTCGCCGGGATGGCCGAGAACGACCTGGGGCGCAGCCACCTGGCGCTCGCGCACCTCGAGCGCGCGCTGGCGGCCC GGCCCAGGGACCCGGACGCGCTCTACGAGCGCGGCGTGGCCCTGTTCGAGCTGTGCCGCTTCGGCGAGGCGCGCCGGGCC TTCGAGCGCGCGCTGGCGATCGCGCCCGACGACGCGTGGGCCATCCACCAGCTCGGCCTGGTCGCCGAGCGCAGCGGCGA CGGCCGGCGCGCCGCGGCGCTCCTGGCGCGGGCGCGCACGCTCGCGCCGGACGACTTCCGCGACGAGCTGGCGGTGGACG CGGGCGCGTTCCGGGCCGAGGTGGAGGCCGCGGTGGCGGCGCTCCCCGCGGCCGAGCGCGAGGCGCTGAAGCTCGCGCCG GTGGAGATCCAGGACCTGCCCGACACCGAGGACCTCACCGCGGTCGAGCCGCCGCTCTCGCCGTCGATCCTCGGGCTGTA CCGCGGCCCGCCCGCCGACGAGGCCTGCACCGAGGCCGACGGGCCCCGCTGCCGGAGCATCGTGTTCTACCGCAAGAACC TGCTCCGCTTCGCGCGCGACCGGGCCGAGCTCACCGAGCAGGTGCGCGTGACGCTCCTGCACGAGCTCGGGCACCTGCAC GGCGAGTCGGACGACGAGCTGCGCGACCGCGGCCTCGAGTAG
Upstream 100 bases:
>100_bases GGGCGCCGCCTGCGCCCTCTGCCCTCGGCCGGCCGCGCGGGCGCTCGCGGCGCGGGACCCCGGCTGGCGCGCCCCCGAGG GCTGTGGCAAGCTCGCGGCG
Downstream 100 bases:
>100_bases GTCGCGGCGCAGGCCGCGTCAGTGCCGCGTCCGCGGCGCGCCGGGCCCGGCCTCCTCGTCGTCGCCGGCCTCGCCGCCTT CGCCCTCCTCCTCGCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSLPFRRAAVLLLAAACTPSTAPAPAPAAPQANHVARGTITPARYVPPPARGSRARPEACLPGEPFAAPSALAEEAVAAL DAGARERALACADEALRLAPRMVPALTARGAALAALDRLDEARLAFARALAVDPDEPEALLGAAELHVRRLGAARDALEA GLEYAVRGARSATRPPRKDKDLAARLELVAGMAENDLGRSHLALAHLERALAARPRDPDALYERGVALFELCRFGEARRA FERALAIAPDDAWAIHQLGLVAERSGDGRRAAALLARARTLAPDDFRDELAVDAGAFRAEVEAAVAALPAAEREALKLAP VEIQDLPDTEDLTAVEPPLSPSILGLYRGPPADEACTEADGPRCRSIVFYRKNLLRFARDRAELTEQVRVTLLHELGHLH GESDDELRDRGLE
Sequences:
>Translated_413_residues MSLPFRRAAVLLLAAACTPSTAPAPAPAAPQANHVARGTITPARYVPPPARGSRARPEACLPGEPFAAPSALAEEAVAAL DAGARERALACADEALRLAPRMVPALTARGAALAALDRLDEARLAFARALAVDPDEPEALLGAAELHVRRLGAARDALEA GLEYAVRGARSATRPPRKDKDLAARLELVAGMAENDLGRSHLALAHLERALAARPRDPDALYERGVALFELCRFGEARRA FERALAIAPDDAWAIHQLGLVAERSGDGRRAAALLARARTLAPDDFRDELAVDAGAFRAEVEAAVAALPAAEREALKLAP VEIQDLPDTEDLTAVEPPLSPSILGLYRGPPADEACTEADGPRCRSIVFYRKNLLRFARDRAELTEQVRVTLLHELGHLH GESDDELRDRGLE >Mature_412_residues SLPFRRAAVLLLAAACTPSTAPAPAPAAPQANHVARGTITPARYVPPPARGSRARPEACLPGEPFAAPSALAEEAVAALD AGARERALACADEALRLAPRMVPALTARGAALAALDRLDEARLAFARALAVDPDEPEALLGAAELHVRRLGAARDALEAG LEYAVRGARSATRPPRKDKDLAARLELVAGMAENDLGRSHLALAHLERALAARPRDPDALYERGVALFELCRFGEARRAF ERALAIAPDDAWAIHQLGLVAERSGDGRRAAALLARARTLAPDDFRDELAVDAGAFRAEVEAAVAALPAAEREALKLAPV EIQDLPDTEDLTAVEPPLSPSILGLYRGPPADEACTEADGPRCRSIVFYRKNLLRFARDRAELTEQVRVTLLHELGHLHG ESDDELRDRGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44031; Mature: 43900
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPFRRAAVLLLAAACTPSTAPAPAPAAPQANHVARGTITPARYVPPPARGSRARPEAC CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGEPFAAPSALAEEAVAALDAGARERALACADEALRLAPRMVPALTARGAALAALDRLD CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EARLAFARALAVDPDEPEALLGAAELHVRRLGAARDALEAGLEYAVRGARSATRPPRKDK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH DLAARLELVAGMAENDLGRSHLALAHLERALAARPRDPDALYERGVALFELCRFGEARRA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHH FERALAIAPDDAWAIHQLGLVAERSGDGRRAAALLARARTLAPDDFRDELAVDAGAFRAE HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VEAAVAALPAAEREALKLAPVEIQDLPDTEDLTAVEPPLSPSILGLYRGPPADEACTEAD HHHHHHHCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCC GPRCRSIVFYRKNLLRFARDRAELTEQVRVTLLHELGHLHGESDDELRDRGLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure SLPFRRAAVLLLAAACTPSTAPAPAPAAPQANHVARGTITPARYVPPPARGSRARPEAC CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGEPFAAPSALAEEAVAALDAGARERALACADEALRLAPRMVPALTARGAALAALDRLD CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EARLAFARALAVDPDEPEALLGAAELHVRRLGAARDALEAGLEYAVRGARSATRPPRKDK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH DLAARLELVAGMAENDLGRSHLALAHLERALAARPRDPDALYERGVALFELCRFGEARRA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHH FERALAIAPDDAWAIHQLGLVAERSGDGRRAAALLARARTLAPDDFRDELAVDAGAFRAE HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VEAAVAALPAAEREALKLAPVEIQDLPDTEDLTAVEPPLSPSILGLYRGPPADEACTEAD HHHHHHHCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCC GPRCRSIVFYRKNLLRFARDRAELTEQVRVTLLHELGHLHGESDDELRDRGLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA