Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is yajQ [C]
Identifier: 220915233
GI number: 220915233
Start: 124928
End: 125416
Strand: Reverse
Name: yajQ [C]
Synonym: A2cp1_0112
Alternate gene names: 220915233
Gene position: 125416-124928 (Counterclockwise)
Preceding gene: 220915234
Following gene: 220915232
Centisome position: 2.49
GC content: 68.92
Gene sequence:
>489_bases GTGCCGAGCTTCGACGTCGTGTCCGAGGTGGACCTGATGGAGGTCGAGAACGCGTTCAACCAGGCGCGCAAGGAGATCGC GCAGCGCTTCGACTTCAAGGGCACCCACACCGAGCTCGAGCGCGACAAGGAGCAGAACGTGCTGATCCGGGCCGGCTCGG AGGGGCGGGCCGAGGCGGCGCTGCAGGTGCTGATGGAGAAGCTGGCGAAGCGCGGCGTGGCGCTCGAGTCGCTCGACCCG CAGAAGCTCGAGCCCGCCTCCGGCGGCCACGTGCGCCAGCTCGTGAAGCTGAAGCGCGGGCTGAAGATCGAGGACGCCCG GAAGATCGTGGCGAAGGTGAAGGAGAGCGGGATCAAGGTGCAGGCCGCCATCCAGGGCGAGGCGGTGCGGGTGACCGGCA AGAAGCGCGACGACCTGCAGGCCGCCATCCACGCCATCCGCGCGGCCGCGTTCCCCATCCCGCTGCAGTTCCAGAACTTC CGGGACTGA
Upstream 100 bases:
>100_bases CTTCTTCCGCCGGACCACCGGCAAGAAGCCGCCCGTGCTACCGGTGGTCCTGGAGCTGTGAACCGGGCGGCCCCGCGCCG CCGAGAGCCTGGAGGCAGCC
Downstream 100 bases:
>100_bases CCCGGCGCCGCGCCGCCCCTCCCCCGGCCTGGGGAGGGGGCTGGATTGCCCCGGGCCCCCCGGTCTGTTAGATCGCGCCT CCCCATGGCCACCCGCGTCT
Product: nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPSFDVVSEVDLMEVENAFNQARKEIAQRFDFKGTHTELERDKEQNVLIRAGSEGRAEAALQVLMEKLAKRGVALESLDP QKLEPASGGHVRQLVKLKRGLKIEDARKIVAKVKESGIKVQAAIQGEAVRVTGKKRDDLQAAIHAIRAAAFPIPLQFQNF RD
Sequences:
>Translated_162_residues MPSFDVVSEVDLMEVENAFNQARKEIAQRFDFKGTHTELERDKEQNVLIRAGSEGRAEAALQVLMEKLAKRGVALESLDP QKLEPASGGHVRQLVKLKRGLKIEDARKIVAKVKESGIKVQAAIQGEAVRVTGKKRDDLQAAIHAIRAAAFPIPLQFQNF RD >Mature_161_residues PSFDVVSEVDLMEVENAFNQARKEIAQRFDFKGTHTELERDKEQNVLIRAGSEGRAEAALQVLMEKLAKRGVALESLDPQ KLEPASGGHVRQLVKLKRGLKIEDARKIVAKVKESGIKVQAAIQGEAVRVTGKKRDDLQAAIHAIRAAAFPIPLQFQNFR D
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=42.9447852760736, Blast_Score=125, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18010; Mature: 17879
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDVVSEVDLMEVENAFNQARKEIAQRFDFKGTHTELERDKEQNVLIRAGSEGRAEAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCHHHHH LQVLMEKLAKRGVALESLDPQKLEPASGGHVRQLVKLKRGLKIEDARKIVAKVKESGIKV HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE QAAIQGEAVRVTGKKRDDLQAAIHAIRAAAFPIPLQFQNFRD EEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PSFDVVSEVDLMEVENAFNQARKEIAQRFDFKGTHTELERDKEQNVLIRAGSEGRAEAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCHHHHH LQVLMEKLAKRGVALESLDPQKLEPASGGHVRQLVKLKRGLKIEDARKIVAKVKESGIKV HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE QAAIQGEAVRVTGKKRDDLQAAIHAIRAAAFPIPLQFQNFRD EEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA