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The map label for this gene is pinQ [H]

Identifier: 220915142

GI number: 220915142

Start: 22598

End: 23185

Strand: Reverse

Name: pinQ [H]

Synonym: A2cp1_0019

Alternate gene names: 220915142

Gene position: 23185-22598 (Counterclockwise)

Preceding gene: 220915146

Following gene: 220915140

Centisome position: 0.46

GC content: 73.47

Gene sequence:

>588_bases
ATGAACAACCCCGCGCGGATCGCCACCTACCACCGCGTCTCGACCCTCGACCAGAACGCCAGCCTCGCCCGCGAGGAGCT
TCGCGGCGCGGCTGCACGCCTCGGCGGCGAGGTCGTCCTCGACATGGAGGAGACGGGCTCCGGCGCCCGCAACGACCGCC
CTGGTCTCCAGCGGCTCATGGAGGCGGCCCGGCGCGGGAAGCTCGACGCGGTGGTGGTCTGGAAGCTCGACCGCTTCGGC
CGCTCCGCCCTCGACGTGCTGGCGAACATCCGCGACCTCGACGCTGCCGGCGTCCGGTTCATCGCGATCACGCAGGGCAT
CGACATCCGGCCCGGGGGCGACGCCATGAGCCGCCTCATCCTGGGCGTGCTGGCATCGGTGGCCGAGTTCGAGCGCGACC
TGATCCGCGAGCGCACGAAGCTCGGCATCCAGAAGGCGCGGGCCGCCGGGAAGCGCATCGGCCGCCCCCAGGTCGCCCGG
CCCGAGCGCGTGCAGGTGCAGCGCCTCCGGGAGGAGGGCCACTCGTGGCGTGAGGTCGCGGAGGCGCTCGGGTGTTCGAC
ATGGGCCGCCCGCCAGGTGGCGGCATGA

Upstream 100 bases:

>100_bases
AGGGGACCCTGGGAACGGCCGCCTCACGCCCCCGCAGATCGCGGGGTTGGCCCCATGGTCACGGGCTGGTGGGAACTGGA
CGTATTGCTACACCATCGCG

Downstream 100 bases:

>100_bases
CCCTCACGCCGCGCCGGTCAGGACCCCTCCAGCGCACTGTTACAGTAGAGGGTGAGCGCCGAGTTCCCTCGCCCCGGCGG
CCCTGCCGCCCACCGCACCG

Product: Resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNNPARIATYHRVSTLDQNASLAREELRGAAARLGGEVVLDMEETGSGARNDRPGLQRLMEAARRGKLDAVVVWKLDRFG
RSALDVLANIRDLDAAGVRFIAITQGIDIRPGGDAMSRLILGVLASVAEFERDLIRERTKLGIQKARAAGKRIGRPQVAR
PERVQVQRLREEGHSWREVAEALGCSTWAARQVAA

Sequences:

>Translated_195_residues
MNNPARIATYHRVSTLDQNASLAREELRGAAARLGGEVVLDMEETGSGARNDRPGLQRLMEAARRGKLDAVVVWKLDRFG
RSALDVLANIRDLDAAGVRFIAITQGIDIRPGGDAMSRLILGVLASVAEFERDLIRERTKLGIQKARAAGKRIGRPQVAR
PERVQVQRLREEGHSWREVAEALGCSTWAARQVAA
>Mature_195_residues
MNNPARIATYHRVSTLDQNASLAREELRGAAARLGGEVVLDMEETGSGARNDRPGLQRLMEAARRGKLDAVVVWKLDRFG
RSALDVLANIRDLDAAGVRFIAITQGIDIRPGGDAMSRLILGVLASVAEFERDLIRERTKLGIQKARAAGKRIGRPQVAR
PERVQVQRLREEGHSWREVAEALGCSTWAARQVAA

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787638, Length=164, Percent_Identity=39.6341463414634, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1787827, Length=163, Percent_Identity=38.6503067484663, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1787404, Length=186, Percent_Identity=39.247311827957, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 21413; Mature: 21413

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPARIATYHRVSTLDQNASLAREELRGAAARLGGEVVLDMEETGSGARNDRPGLQRLM
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCHHHHHHH
EAARRGKLDAVVVWKLDRFGRSALDVLANIRDLDAAGVRFIAITQGIDIRPGGDAMSRLI
HHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
LGVLASVAEFERDLIRERTKLGIQKARAAGKRIGRPQVARPERVQVQRLREEGHSWREVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHH
EALGCSTWAARQVAA
HHHCCHHHHHHHHCC
>Mature Secondary Structure
MNNPARIATYHRVSTLDQNASLAREELRGAAARLGGEVVLDMEETGSGARNDRPGLQRLM
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCHHHHHHH
EAARRGKLDAVVVWKLDRFGRSALDVLANIRDLDAAGVRFIAITQGIDIRPGGDAMSRLI
HHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
LGVLASVAEFERDLIRERTKLGIQKARAAGKRIGRPQVARPERVQVQRLREEGHSWREVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHH
EALGCSTWAARQVAA
HHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]