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The map label for this gene is ybhR [H]

Identifier: 220914945

GI number: 220914945

Start: 323510

End: 324616

Strand: Reverse

Name: ybhR [H]

Synonym: Mnod_8101

Alternate gene names: 220914945

Gene position: 324616-323510 (Counterclockwise)

Preceding gene: 220914946

Following gene: 220914944

Centisome position: 70.87

GC content: 63.05

Gene sequence:

>1107_bases
ATGAGGACCCGCCTCCTTGCCCTGATCGTGAAGGAGCTGCTGGCCACGTTCCGCGATCGAAAGGCACGGGCCGCGCTGAC
CGTGCCGCCGTTCATCCAGCTCTTCATCTTCGCCTTCGCGGCGACGCTTGAGGTCACCAACGTCCCCATCGGCATCATCA
ACGACGACTGGGGCGCGGCGTCGGTGCGGCTTATCAGCCGGTTCGAGCGAGCATCGGCCTTCTCGGAGATTCGCCGCTAT
TCCACCCTTTCGGAGGCACAGGCCGCCATTGACTCGCAGCAGGTCATGGCGGTCCTGCGCGTTGGACAGGACTTCTCGCG
CAAGCTTGCCAGGAGGGAGACGCCGACCGTGCAAGTGCTGCTCGATGGCCGCAAGTCGAACAGCGCGCAGCTCCTCAACA
ACTATATCGGTACGATCATCTCGCAGTTCAGCGCCGACGAGCGCACAGGCGTCCCCTACGCGCCGCAGAGCGAGATCGTG
GATCGGTCATGGTATAATCCCAACCGGGACTATCGGGAGGCGATGGTGCCGATCCTGATAGCGACGCTGCCCATGACCAT
CGTGCTGATGGTCGTCGGGATGTCGGTAGCCCGGGAGCAGGAACTCGGGACGTTCGAGCAACTCCTCGTGTCCCCGCTGC
AGCCGATCGAGATCATCGTGGGCAAGGCGGTGCCAGGCTTGATCATAGGACTCGCGCAGTGCACGGCGATGACCCTGATC
GTGGTGTTCGGGTTCGGGATCGCGGTGACGGGCTCGGTGCCGGTCCTGTTCCTTGGCCTGACCGTGTTCCTGATCGCCAT
CATCGGTGTCGGCCTGTTCATCTCCTCGCTCGCGACGAACCAGCAGCAGGCGATGATGGGCATCATGGTTTGCATGATGC
CGACGATGCTCCTCTCGGGCTTCTCCTCGCCCGTGCAGAATATGCCGTCTTGGCTTCAGCTGTTCGCGGTGGTCAACCCG
CTCACCCACATGCTCGTCATTGTGCGGGGCGTGTTCTTGCGCGACATGCCCTTCTGGCTGGTTGCCGAGCGCATCTGGCC
GATGGCGCTGACGGCCATCGTCACACTCTCAGCCGCCGCGTGGATGTTTCGCCGAAAGGTGCAGTGA

Upstream 100 bases:

>100_bases
GCCGCCGTCCTCGTGCCGGCCACCATCGTTCTCCTCGCGATGAGCGCGGTCCTGTTCGCGCTCACGGCGGCCAAGTCGCG
CCAGACCCTGGACTAGAGAC

Downstream 100 bases:

>100_bases
GGGCGACGGATGGCTTCCGGGAGCCGCCTGTCGCGGTCCGCTCCTGGGGAGACGCAACCCGCACATCCTGTGTGCGACCG
GGTGATGTGCCGTCGGTGGA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MRTRLLALIVKELLATFRDRKARAALTVPPFIQLFIFAFAATLEVTNVPIGIINDDWGAASVRLISRFERASAFSEIRRY
STLSEAQAAIDSQQVMAVLRVGQDFSRKLARRETPTVQVLLDGRKSNSAQLLNNYIGTIISQFSADERTGVPYAPQSEIV
DRSWYNPNRDYREAMVPILIATLPMTIVLMVVGMSVAREQELGTFEQLLVSPLQPIEIIVGKAVPGLIIGLAQCTAMTLI
VVFGFGIAVTGSVPVLFLGLTVFLIAIIGVGLFISSLATNQQQAMMGIMVCMMPTMLLSGFSSPVQNMPSWLQLFAVVNP
LTHMLVIVRGVFLRDMPFWLVAERIWPMALTAIVTLSAAAWMFRRKVQ

Sequences:

>Translated_368_residues
MRTRLLALIVKELLATFRDRKARAALTVPPFIQLFIFAFAATLEVTNVPIGIINDDWGAASVRLISRFERASAFSEIRRY
STLSEAQAAIDSQQVMAVLRVGQDFSRKLARRETPTVQVLLDGRKSNSAQLLNNYIGTIISQFSADERTGVPYAPQSEIV
DRSWYNPNRDYREAMVPILIATLPMTIVLMVVGMSVAREQELGTFEQLLVSPLQPIEIIVGKAVPGLIIGLAQCTAMTLI
VVFGFGIAVTGSVPVLFLGLTVFLIAIIGVGLFISSLATNQQQAMMGIMVCMMPTMLLSGFSSPVQNMPSWLQLFAVVNP
LTHMLVIVRGVFLRDMPFWLVAERIWPMALTAIVTLSAAAWMFRRKVQ
>Mature_368_residues
MRTRLLALIVKELLATFRDRKARAALTVPPFIQLFIFAFAATLEVTNVPIGIINDDWGAASVRLISRFERASAFSEIRRY
STLSEAQAAIDSQQVMAVLRVGQDFSRKLARRETPTVQVLLDGRKSNSAQLLNNYIGTIISQFSADERTGVPYAPQSEIV
DRSWYNPNRDYREAMVPILIATLPMTIVLMVVGMSVAREQELGTFEQLLVSPLQPIEIIVGKAVPGLIIGLAQCTAMTLI
VVFGFGIAVTGSVPVLFLGLTVFLIAIIGVGLFISSLATNQQQAMMGIMVCMMPTMLLSGFSSPVQNMPSWLQLFAVVNP
LTHMLVIVRGVFLRDMPFWLVAERIWPMALTAIVTLSAAAWMFRRKVQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=43.8692098092643, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1787011, Length=343, Percent_Identity=26.8221574344023, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI226510979, Length=356, Percent_Identity=27.5280898876405, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI48994943, Length=337, Percent_Identity=25.8160237388724, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40667; Mature: 40667

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRLLALIVKELLATFRDRKARAALTVPPFIQLFIFAFAATLEVTNVPIGIINDDWGAA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH
SVRLISRFERASAFSEIRRYSTLSEAQAAIDSQQVMAVLRVGQDFSRKLARRETPTVQVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEE
LDGRKSNSAQLLNNYIGTIISQFSADERTGVPYAPQSEIVDRSWYNPNRDYREAMVPILI
ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
ATLPMTIVLMVVGMSVAREQELGTFEQLLVSPLQPIEIIVGKAVPGLIIGLAQCTAMTLI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
VVFGFGIAVTGSVPVLFLGLTVFLIAIIGVGLFISSLATNQQQAMMGIMVCMMPTMLLSG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
FSSPVQNMPSWLQLFAVVNPLTHMLVIVRGVFLRDMPFWLVAERIWPMALTAIVTLSAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WMFRRKVQ
HHHHHHCC
>Mature Secondary Structure
MRTRLLALIVKELLATFRDRKARAALTVPPFIQLFIFAFAATLEVTNVPIGIINDDWGAA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH
SVRLISRFERASAFSEIRRYSTLSEAQAAIDSQQVMAVLRVGQDFSRKLARRETPTVQVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEE
LDGRKSNSAQLLNNYIGTIISQFSADERTGVPYAPQSEIVDRSWYNPNRDYREAMVPILI
ECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
ATLPMTIVLMVVGMSVAREQELGTFEQLLVSPLQPIEIIVGKAVPGLIIGLAQCTAMTLI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
VVFGFGIAVTGSVPVLFLGLTVFLIAIIGVGLFISSLATNQQQAMMGIMVCMMPTMLLSG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
FSSPVQNMPSWLQLFAVVNPLTHMLVIVRGVFLRDMPFWLVAERIWPMALTAIVTLSAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WMFRRKVQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]