Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is proB [H]
Identifier: 220905508
GI number: 220905508
Start: 2707554
End: 2708864
Strand: Reverse
Name: proB [H]
Synonym: Ddes_2247
Alternate gene names: 220905508
Gene position: 2708864-2707554 (Counterclockwise)
Preceding gene: 220905509
Following gene: 220905506
Centisome position: 94.27
GC content: 63.84
Gene sequence:
>1311_bases ATGAGCAGGCAGCGCCCTCATGGCACGGCGTCCGGAGCCGGACGGCCGGAGCAGTGCGGCACGTGTGGCTCTGAAGAAGA GCGGTCTGAAACCTGGCAGCAGGAGCGCGTGCGCGTTCTGGCTCAGGCGCGGGTAATTGTGGTCAAGGTGGGCAGCGCCG TGCTGACGGATGCCAGCGGGCTGAGCAGCCCTGTGCTGGCGGGGCTTGCCGCACAGCTTGCCGCCTTGCGCGACCTGCCC CTTGTCAGTGATCCGGCGGGGCAGCCCCAGCAGGGGGCGCGCCGTCTGGTGCTGGTTTCTTCGGGCGCGGTGGCGGCCGG GCGTGCCGCCCTGACAAGCCGGGGTCGCGTGGTGGAAACTGCGGGCCTGGCTGCGCGTCAGGCCGCGGCGGCTGTGGGGC AGGGCCAGCTTATGCAGGCCTGGGACAAGGTTTTTCTGGCCCACGGCATGCCTACGGCACAGGTGCTGCTGACGCGTGAC GACCTTCGCGCGCGTCAACGCTTTCTCAATGCCCGTAATACCTTTGCCGAATTGCTGCACTGGGATGTATTGCCGATCGT CAATGAAAACGACACGGTATCCATCAGCGAACTGAAGTTTGGCGATAATGACTGTCTGGCGAGCCTGCTTATAAATCTGG TGGAAGCCGATCTTTTTATCAATCTGACCTCTTCGTCGGGTGTGCTCGCGGCTGATCCGCAAAAATATCCCGATGCGCCC GTTATGGACCATATCGACGATGTGGCAACGCTGGATCTGGGGCAGCTTTGCGGCGGCAAGACGCTGGTGGGCACAGGTGG CATGTATTCCAAGCTGCTGGCCGCGCGCCGTGCCGCGCAACTGGGCGTACCCACACTGATTCTGCCCGGCCGTGAGCCTT GGGTCATCAGCCGGGCCTTTGCCGCTGCCGGGGTATGCCCCGCGCCTGACGGGCATGAACCGTTCACGCGCGGAACCTGG GTGCGGTCCGGGCAACACGCAATCACGCGGCGCAAGTTTTGGCTGGCCTATCAGTCTGACCCTGCGGGCAGCGTGCATGT GGATGACGGTGCGGCCAAAGCCTTGCTGCACAAGGGCAGCAGTCTGCTGCCCGGCGGCGTGTGCGCGGTGGAAGGAACCT TTCAGCGGGGGGGCCTTGTGCGCGTACTGCACAAGGGTGAAAGCATCGGTGTGGGACTTTCCAACTACAGTGCGCCGGAG CTCAAGAAGATCATGGGGCTTAAGCGCCATGAGGTGGCGGCCATTCTTGGTGATGCCCATTACCCCGAAGTCATACACAG GGATAACCTGCTGGTGGATGCGGCGGTCTGA
Upstream 100 bases:
>100_bases AGCCGATTGTGCGTCTGGAAGGCCTCACCGATGTGGAGGAAGAGGAATTTCCCGAAATTGAAGTCATCTATACCCGCGAA TAGCGGGATGTGGAGCGGAT
Downstream 100 bases:
>100_bases TTCCGTGGGGCGTGTCCTCTGCTGCTGCGGGCGCGTCCGCATTTTGCATGATGCTCTGTCTTGACGCTGCGCAAAACGCC GTAAGGCGATTGGCCTTGCC
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSRQRPHGTASGAGRPEQCGTCGSEEERSETWQQERVRVLAQARVIVVKVGSAVLTDASGLSSPVLAGLAAQLAALRDLP LVSDPAGQPQQGARRLVLVSSGAVAAGRAALTSRGRVVETAGLAARQAAAAVGQGQLMQAWDKVFLAHGMPTAQVLLTRD DLRARQRFLNARNTFAELLHWDVLPIVNENDTVSISELKFGDNDCLASLLINLVEADLFINLTSSSGVLAADPQKYPDAP VMDHIDDVATLDLGQLCGGKTLVGTGGMYSKLLAARRAAQLGVPTLILPGREPWVISRAFAAAGVCPAPDGHEPFTRGTW VRSGQHAITRRKFWLAYQSDPAGSVHVDDGAAKALLHKGSSLLPGGVCAVEGTFQRGGLVRVLHKGESIGVGLSNYSAPE LKKIMGLKRHEVAAILGDAHYPEVIHRDNLLVDAAV
Sequences:
>Translated_436_residues MSRQRPHGTASGAGRPEQCGTCGSEEERSETWQQERVRVLAQARVIVVKVGSAVLTDASGLSSPVLAGLAAQLAALRDLP LVSDPAGQPQQGARRLVLVSSGAVAAGRAALTSRGRVVETAGLAARQAAAAVGQGQLMQAWDKVFLAHGMPTAQVLLTRD DLRARQRFLNARNTFAELLHWDVLPIVNENDTVSISELKFGDNDCLASLLINLVEADLFINLTSSSGVLAADPQKYPDAP VMDHIDDVATLDLGQLCGGKTLVGTGGMYSKLLAARRAAQLGVPTLILPGREPWVISRAFAAAGVCPAPDGHEPFTRGTW VRSGQHAITRRKFWLAYQSDPAGSVHVDDGAAKALLHKGSSLLPGGVCAVEGTFQRGGLVRVLHKGESIGVGLSNYSAPE LKKIMGLKRHEVAAILGDAHYPEVIHRDNLLVDAAV >Mature_435_residues SRQRPHGTASGAGRPEQCGTCGSEEERSETWQQERVRVLAQARVIVVKVGSAVLTDASGLSSPVLAGLAAQLAALRDLPL VSDPAGQPQQGARRLVLVSSGAVAAGRAALTSRGRVVETAGLAARQAAAAVGQGQLMQAWDKVFLAHGMPTAQVLLTRDD LRARQRFLNARNTFAELLHWDVLPIVNENDTVSISELKFGDNDCLASLLINLVEADLFINLTSSSGVLAADPQKYPDAPV MDHIDDVATLDLGQLCGGKTLVGTGGMYSKLLAARRAAQLGVPTLILPGREPWVISRAFAAAGVCPAPDGHEPFTRGTWV RSGQHAITRRKFWLAYQSDPAGSVHVDDGAAKALLHKGSSLLPGGVCAVEGTFQRGGLVRVLHKGESIGVGLSNYSAPEL KKIMGLKRHEVAAILGDAHYPEVIHRDNLLVDAAV
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=288, Percent_Identity=32.2916666666667, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI62912457, Length=286, Percent_Identity=33.2167832167832, Blast_Score=98, Evalue=1e-20, Organism=Escherichia coli, GI1786437, Length=397, Percent_Identity=37.0277078085642, Blast_Score=229, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17569967, Length=280, Percent_Identity=33.9285714285714, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17569969, Length=280, Percent_Identity=33.9285714285714, Blast_Score=118, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6320506, Length=431, Percent_Identity=32.0185614849188, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321822, Length=431, Percent_Identity=29.6983758700696, Blast_Score=180, Evalue=4e-46, Organism=Drosophila melanogaster, GI21357643, Length=291, Percent_Identity=32.3024054982818, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 46063; Mature: 45932
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQRPHGTASGAGRPEQCGTCGSEEERSETWQQERVRVLAQARVIVVKVGSAVLTDASG CCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHEECCCC LSSPVLAGLAAQLAALRDLPLVSDPAGQPQQGARRLVLVSSGAVAAGRAALTSRGRVVET CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCCHHCHHHHHCCCCEEEH AGLAARQAAAAVGQGQLMQAWDKVFLAHGMPTAQVLLTRDDLRARQRFLNARNTFAELLH HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHH WDVLPIVNENDTVSISELKFGDNDCLASLLINLVEADLFINLTSSSGVLAADPQKYPDAP HCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCEEEEEECCCCEEEECCCCCCCCC VMDHIDDVATLDLGQLCGGKTLVGTGGMYSKLLAARRAAQLGVPTLILPGREPWVISRAF HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHH AAAGVCPAPDGHEPFTRGTWVRSGQHAITRRKFWLAYQSDPAGSVHVDDGAAKALLHKGS HHCCCCCCCCCCCCCCCCCEEECCCHHHHEEEEEEEEECCCCCEEEECCHHHHHHHHCCC SLLPGGVCAVEGTFQRGGLVRVLHKGESIGVGLSNYSAPELKKIMGLKRHEVAAILGDAH CCCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCC YPEVIHRDNLLVDAAV CCHHHCCCCEEEEECC >Mature Secondary Structure SRQRPHGTASGAGRPEQCGTCGSEEERSETWQQERVRVLAQARVIVVKVGSAVLTDASG CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHEECCCC LSSPVLAGLAAQLAALRDLPLVSDPAGQPQQGARRLVLVSSGAVAAGRAALTSRGRVVET CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEECCCCHHCHHHHHCCCCEEEH AGLAARQAAAAVGQGQLMQAWDKVFLAHGMPTAQVLLTRDDLRARQRFLNARNTFAELLH HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHH WDVLPIVNENDTVSISELKFGDNDCLASLLINLVEADLFINLTSSSGVLAADPQKYPDAP HCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCEEEEEECCCCEEEECCCCCCCCC VMDHIDDVATLDLGQLCGGKTLVGTGGMYSKLLAARRAAQLGVPTLILPGREPWVISRAF HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHH AAAGVCPAPDGHEPFTRGTWVRSGQHAITRRKFWLAYQSDPAGSVHVDDGAAKALLHKGS HHCCCCCCCCCCCCCCCCCEEECCCHHHHEEEEEEEEECCCCCEEEECCHHHHHHHHCCC SLLPGGVCAVEGTFQRGGLVRVLHKGESIGVGLSNYSAPELKKIMGLKRHEVAAILGDAH CCCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCC YPEVIHRDNLLVDAAV CCHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA