Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
---|---|
Accession | NC_011883 |
Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is lutP [H]
Identifier: 220905432
GI number: 220905432
Start: 2615858
End: 2617495
Strand: Reverse
Name: lutP [H]
Synonym: Ddes_2170
Alternate gene names: 220905432
Gene position: 2617495-2615858 (Counterclockwise)
Preceding gene: 220905433
Following gene: 220905431
Centisome position: 91.09
GC content: 60.5
Gene sequence:
>1638_bases ATGGCATGGACGCAAGTTTACGATCCGATGGGCGGAGCCGTATGGTCCGCACTGGTAGCGGGGATTCCGCTCATCAGTCT TTTTTACATGCTGGCTGTACGCCGCGCCAAAGGACATTACGCCGCGGCTCTGGCCGTGGGCCTGTCTTTTGTTCTCGCCC TCTTTGTGTGGGGCATGCCTGTGGGCACGGCCTTCAGCGCGTTGACCTACGGGGCAGCCTTTGGCCTCTTTCCGATTATC TGGATCGTGGTCACGGCGGTCTGGGTGTACAACATGACCGTGGAATCGGGCGAATTTGAGTACATCAAGGAATCGCTCGC CCGCCTGACAGACGACCGCCGTCTGCAGGCCATCTTTATCGCCTTTGCTTTCGGTTCGTTCATTGAAGGCACGGCCGGCT TCGGTACGCCCGTGGCCATCACCGCGGCAATGCTGGTGGGCTTGGGCTTCAAGCCCCTGTACGCCGCCGGTATCTGCCTT ATCGCCAACACCGCTCCCGTGGCCTTCGGCGCCATCGGCATTCCGATCATCGTGGGCGCTCAGGTTTCCGGCCTGAACGA AATGACCGTGAGCCAGATTGTGGGTCGCCAGCTGCCCTTCCTGTCCATCATAGTGCCTCTATGGCTGTGCTGCGTCATGT GCGGCTTCCGCCGTTCGCTGGAAGTGCTGCCCGCCATCATCGTGGCCGGTGTGGCTTTTGCCGGTTCGCAGTTCCTGTTC TCCAACTTCCACGGCCCGACCCTGCCCGACATCATGTCGGCCCTGGTCACCATCATCGCCATGGTGCTGCTGCTGCGCGT GTGGAAGCCTGCCCGCGTCTGGCGCTTTGAAGGCGAAAAGGAAAGCAAGATCGAAGGATCTGCGCCGCCCTTCAGTGTGG TGTTCCGCGCATGGCTGCCCTACATCATTCTGGCTGTGATGGTCTTCCTGTGGGGCCTGCCGCAGTTCAAGAACATGCTG AACGCCATTCCCGGCGCCATCATGAAGTTTTCCTGGCCCGGCCTGGACGGCATGGTTGAAAAGACCGCCCCCATCGTGGC CCAGAACACCAACTACGCGGCCGTGTTTACGTTCAACTGGCTGTCTGCCGGCGGCACCGCCATCCTGCTGGCCGGTTTCA TTGCCGTGCCCTTCATGCCCGGCTACTCTTTCAGCAAGGCTGTAAACTGCTTCTTCCGCACCATTTACCAGCTGCGCTTC CCCATCCTGACCATCGCCATGATTCTTGGCCTGGCCTATCTCATGAACTACTCGGGCATGAGTTCCACAATGGGTATTGC CTTTACCCTGACCGGCTCGCTGTTCCCGCTGTTCTCGCCCATTCTGGGCTGGCTCGGCGTGTTTCTGACCGGTTCGGATA CGTCCTCCAACGCCCTGTTCTGCGGTATGCAGCGCTCCACCGCTGAAGTGGTGGGCATGGACCCGAACCTGGCCGTGGCC GCCAACTCCTCCGGTGGTGTGACCGGTAAGATGATTTCGCCCCAGTCCATCAGCGTGGCCACAGCTGCCACCAACCTGGT GGGCCATGAAGGCGACCTCTTCCGCTTCACTCTGGGTCACAGTATTGCAATGACCCTCTTTATCTGCGCGCTGACCTATC TGCAGGCCGGCGTGCTGCACTGGATGCTGCCCTCCTAG
Upstream 100 bases:
>100_bases GCTATTCTTGGGGACAGTCGGGTCCGCAGCGCGTGTGGGGTGCACAATCGCTTGCGGGGCCGTGTCTCCATACAAACCAT AGCGCAAGGGAGCAGTTGTT
Downstream 100 bases:
>100_bases GGTTTTGTTTCCCTGCCGCCGCCTGTCGGACAGGCGGCGGCAGGGGCTGGCTACACCCCGCAAGATGATCACCAGGGCGG ACCTGACCGGTACGACCGCG
Product: L-lactate transport protein
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MAWTQVYDPMGGAVWSALVAGIPLISLFYMLAVRRAKGHYAAALAVGLSFVLALFVWGMPVGTAFSALTYGAAFGLFPII WIVVTAVWVYNMTVESGEFEYIKESLARLTDDRRLQAIFIAFAFGSFIEGTAGFGTPVAITAAMLVGLGFKPLYAAGICL IANTAPVAFGAIGIPIIVGAQVSGLNEMTVSQIVGRQLPFLSIIVPLWLCCVMCGFRRSLEVLPAIIVAGVAFAGSQFLF SNFHGPTLPDIMSALVTIIAMVLLLRVWKPARVWRFEGEKESKIEGSAPPFSVVFRAWLPYIILAVMVFLWGLPQFKNML NAIPGAIMKFSWPGLDGMVEKTAPIVAQNTNYAAVFTFNWLSAGGTAILLAGFIAVPFMPGYSFSKAVNCFFRTIYQLRF PILTIAMILGLAYLMNYSGMSSTMGIAFTLTGSLFPLFSPILGWLGVFLTGSDTSSNALFCGMQRSTAEVVGMDPNLAVA ANSSGGVTGKMISPQSISVATAATNLVGHEGDLFRFTLGHSIAMTLFICALTYLQAGVLHWMLPS
Sequences:
>Translated_545_residues MAWTQVYDPMGGAVWSALVAGIPLISLFYMLAVRRAKGHYAAALAVGLSFVLALFVWGMPVGTAFSALTYGAAFGLFPII WIVVTAVWVYNMTVESGEFEYIKESLARLTDDRRLQAIFIAFAFGSFIEGTAGFGTPVAITAAMLVGLGFKPLYAAGICL IANTAPVAFGAIGIPIIVGAQVSGLNEMTVSQIVGRQLPFLSIIVPLWLCCVMCGFRRSLEVLPAIIVAGVAFAGSQFLF SNFHGPTLPDIMSALVTIIAMVLLLRVWKPARVWRFEGEKESKIEGSAPPFSVVFRAWLPYIILAVMVFLWGLPQFKNML NAIPGAIMKFSWPGLDGMVEKTAPIVAQNTNYAAVFTFNWLSAGGTAILLAGFIAVPFMPGYSFSKAVNCFFRTIYQLRF PILTIAMILGLAYLMNYSGMSSTMGIAFTLTGSLFPLFSPILGWLGVFLTGSDTSSNALFCGMQRSTAEVVGMDPNLAVA ANSSGGVTGKMISPQSISVATAATNLVGHEGDLFRFTLGHSIAMTLFICALTYLQAGVLHWMLPS >Mature_544_residues AWTQVYDPMGGAVWSALVAGIPLISLFYMLAVRRAKGHYAAALAVGLSFVLALFVWGMPVGTAFSALTYGAAFGLFPIIW IVVTAVWVYNMTVESGEFEYIKESLARLTDDRRLQAIFIAFAFGSFIEGTAGFGTPVAITAAMLVGLGFKPLYAAGICLI ANTAPVAFGAIGIPIIVGAQVSGLNEMTVSQIVGRQLPFLSIIVPLWLCCVMCGFRRSLEVLPAIIVAGVAFAGSQFLFS NFHGPTLPDIMSALVTIIAMVLLLRVWKPARVWRFEGEKESKIEGSAPPFSVVFRAWLPYIILAVMVFLWGLPQFKNMLN AIPGAIMKFSWPGLDGMVEKTAPIVAQNTNYAAVFTFNWLSAGGTAILLAGFIAVPFMPGYSFSKAVNCFFRTIYQLRFP ILTIAMILGLAYLMNYSGMSSTMGIAFTLTGSLFPLFSPILGWLGVFLTGSDTSSNALFCGMQRSTAEVVGMDPNLAVAA NSSGGVTGKMISPQSISVATAATNLVGHEGDLFRFTLGHSIAMTLFICALTYLQAGVLHWMLPS
Specific function: Is the principal permease for the uptake of L-lactate in B.subtilis [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=558, Percent_Identity=50.5376344086022, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1790031, Length=549, Percent_Identity=48.4517304189435, Blast_Score=504, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 58467; Mature: 58336
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWTQVYDPMGGAVWSALVAGIPLISLFYMLAVRRAKGHYAAALAVGLSFVLALFVWGMP CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC VGTAFSALTYGAAFGLFPIIWIVVTAVWVYNMTVESGEFEYIKESLARLTDDRRLQAIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCCHHHHHHH AFAFGSFIEGTAGFGTPVAITAAMLVGLGFKPLYAAGICLIANTAPVAFGAIGIPIIVGA HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEECCCCHHHHHCCCCEEECC QVSGLNEMTVSQIVGRQLPFLSIIVPLWLCCVMCGFRRSLEVLPAIIVAGVAFAGSQFLF CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SNFHGPTLPDIMSALVTIIAMVLLLRVWKPARVWRFEGEKESKIEGSAPPFSVVFRAWLP HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH YIILAVMVFLWGLPQFKNMLNAIPGAIMKFSWPGLDGMVEKTAPIVAQNTNYAAVFTFNW HHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCCCCCCHHHHCCCEEEECCCEEEEEEEEC LSAGGTAILLAGFIAVPFMPGYSFSKAVNCFFRTIYQLRFPILTIAMILGLAYLMNYSGM CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSTMGIAFTLTGSLFPLFSPILGWLGVFLTGSDTSSNALFCGMQRSTAEVVGMDPNLAVA CCCCCEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCHHHCCCCCCEEEE ANSSGGVTGKMISPQSISVATAATNLVGHEGDLFRFTLGHSIAMTLFICALTYLQAGVLH ECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH WMLPS HCCCC >Mature Secondary Structure AWTQVYDPMGGAVWSALVAGIPLISLFYMLAVRRAKGHYAAALAVGLSFVLALFVWGMP CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC VGTAFSALTYGAAFGLFPIIWIVVTAVWVYNMTVESGEFEYIKESLARLTDDRRLQAIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCCHHHHHHH AFAFGSFIEGTAGFGTPVAITAAMLVGLGFKPLYAAGICLIANTAPVAFGAIGIPIIVGA HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEECCCCHHHHHCCCCEEECC QVSGLNEMTVSQIVGRQLPFLSIIVPLWLCCVMCGFRRSLEVLPAIIVAGVAFAGSQFLF CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SNFHGPTLPDIMSALVTIIAMVLLLRVWKPARVWRFEGEKESKIEGSAPPFSVVFRAWLP HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH YIILAVMVFLWGLPQFKNMLNAIPGAIMKFSWPGLDGMVEKTAPIVAQNTNYAAVFTFNW HHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCCCCCCHHHHCCCEEEECCCEEEEEEEEC LSAGGTAILLAGFIAVPFMPGYSFSKAVNCFFRTIYQLRFPILTIAMILGLAYLMNYSGM CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSTMGIAFTLTGSLFPLFSPILGWLGVFLTGSDTSSNALFCGMQRSTAEVVGMDPNLAVA CCCCCEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCHHHCCCCCCEEEE ANSSGGVTGKMISPQSISVATAATNLVGHEGDLFRFTLGHSIAMTLFICALTYLQAGVLH ECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH WMLPS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969506 [H]