Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is dhaT [H]
Identifier: 220905313
GI number: 220905313
Start: 2465430
End: 2466638
Strand: Reverse
Name: dhaT [H]
Synonym: Ddes_2051
Alternate gene names: 220905313
Gene position: 2466638-2465430 (Counterclockwise)
Preceding gene: 220905314
Following gene: 220905311
Centisome position: 85.84
GC content: 60.3
Gene sequence:
>1209_bases ATGTGGGATGACTGCTGCGATTACAATATGGTTCGCGAAGTACGGGTAAAAGGCATTGCTTACCTCGGTGTGGGAGCCAT AGACAAGATAGACCCCATCCTGGGCAGGTTGAAAAGCGAAGGGATAACAGCAGTTCTTTGTGTTTGCGGCGGGCATGCCT ACCGTGCTTCGGGCGCGTGGGATAAAGCCGAGGCCGCCGCCCTCAGGCACGGCATTGTGCTGGCCCTGTACAACAGGGTT ACCCCCAGCCCCACCACAGATACTGTGGATGACGCCGCAGCCCTTGGGCGGGCCATCAATGCCGGAGCGGTGCTTGCCAT AGGCGGGGGCAGCCCTCTGGACTGTGGCAAGAGTGCGGCCATACTGCTGGCCAATCCCGGTAAAAGCGCTGAAGATCTTT TTTGTTTTCGCTTCACGCCCCAGAAGGCCCTTCCTCTAGTTGCCGTCAATCTCACCCACGGCACGGGCAGTGAAGTAAAC CGTTTTGCCGTGGTCACCGTATCGGGGCGCAGCCACAGGTCCATTGTGGGGCATGACTGCATGTACCCCCGGTACGCCAT TGACGACCCCGCCCTTATGACCGGGCTTTCGGCAGAGCAGAGCCGCTATGTGTCCATAAATGCGTTCTGCAGGGTTGTGG AAGCTGCCACAGCCACGGCAGCCAACCCCCTGGCGGTTACGCTGGCCCGCGAAACCGTGCGCCTGGTTCATCACTGGTTG CCGGTGGCGCTGGATGAGCCGGAAAATCTCAAGGCCCGTTACGGGCTGTGCCTGGCAGCCCTTCAGGCCGGGGTGGCTTT TGACAACAGCCATCTGCACCTGGCGCACGCGCTGGAGCAGCCTTTGGGCCGCTTGCGAAATCTGCCTCACGGCATGCGTC TGGCCATTCTGCTGCCTGCTGTGATTGGCGCATGTTACGCCGCCAAGCCCGATGTGCTGGCGCATGTGCTTGGGCCGGTG GCCCCGGGCCTGCAGGGCATGCCCGAAGAAGCTGACCAAGCGGCGCGGGCTGTGGAACGCTGGATATTCAGCCTGGGCAT AACGCAAAAACTCCTGGACTTGGGAGTCCAGGAGTTCGATGTGGAAGAGTTTTGCAACTTCGTCGAGCAGACGCCTTCGC TGGGTCTTCTGCTCTCGGTAGCGCCGGTCAGTATTTCCCGCCAGCTTGTGGCAAGAATTTACACTGAATCGTTGCGCCCC ATGATGTGA
Upstream 100 bases:
>100_bases AAAATTATGTGAAAAATTGCGCAGCTCCTTGACCTAAGCTTATATTCGTTCTAGCTTGATGCAGCGCAATAAAAGCCCAG CGTGATCGCGGGAGGTTGCC
Downstream 100 bases:
>100_bases AATTGCCCATCCTCCTCCAGGGCCGGACTGATCTGCCGCAGTCCGGTCCATACCCAGCCCCTCCGTTTGCCGACGGCGGG GCTTTTTCTTATCACGCCCC
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MWDDCCDYNMVREVRVKGIAYLGVGAIDKIDPILGRLKSEGITAVLCVCGGHAYRASGAWDKAEAAALRHGIVLALYNRV TPSPTTDTVDDAAALGRAINAGAVLAIGGGSPLDCGKSAAILLANPGKSAEDLFCFRFTPQKALPLVAVNLTHGTGSEVN RFAVVTVSGRSHRSIVGHDCMYPRYAIDDPALMTGLSAEQSRYVSINAFCRVVEAATATAANPLAVTLARETVRLVHHWL PVALDEPENLKARYGLCLAALQAGVAFDNSHLHLAHALEQPLGRLRNLPHGMRLAILLPAVIGACYAAKPDVLAHVLGPV APGLQGMPEEADQAARAVERWIFSLGITQKLLDLGVQEFDVEEFCNFVEQTPSLGLLLSVAPVSISRQLVARIYTESLRP MM
Sequences:
>Translated_402_residues MWDDCCDYNMVREVRVKGIAYLGVGAIDKIDPILGRLKSEGITAVLCVCGGHAYRASGAWDKAEAAALRHGIVLALYNRV TPSPTTDTVDDAAALGRAINAGAVLAIGGGSPLDCGKSAAILLANPGKSAEDLFCFRFTPQKALPLVAVNLTHGTGSEVN RFAVVTVSGRSHRSIVGHDCMYPRYAIDDPALMTGLSAEQSRYVSINAFCRVVEAATATAANPLAVTLARETVRLVHHWL PVALDEPENLKARYGLCLAALQAGVAFDNSHLHLAHALEQPLGRLRNLPHGMRLAILLPAVIGACYAAKPDVLAHVLGPV APGLQGMPEEADQAARAVERWIFSLGITQKLLDLGVQEFDVEEFCNFVEQTPSLGLLLSVAPVSISRQLVARIYTESLRP MM >Mature_402_residues MWDDCCDYNMVREVRVKGIAYLGVGAIDKIDPILGRLKSEGITAVLCVCGGHAYRASGAWDKAEAAALRHGIVLALYNRV TPSPTTDTVDDAAALGRAINAGAVLAIGGGSPLDCGKSAAILLANPGKSAEDLFCFRFTPQKALPLVAVNLTHGTGSEVN RFAVVTVSGRSHRSIVGHDCMYPRYAIDDPALMTGLSAEQSRYVSINAFCRVVEAATATAANPLAVTLARETVRLVHHWL PVALDEPENLKARYGLCLAALQAGVAFDNSHLHLAHALEQPLGRLRNLPHGMRLAILLPAVIGACYAAKPDVLAHVLGPV APGLQGMPEEADQAARAVERWIFSLGITQKLLDLGVQEFDVEEFCNFVEQTPSLGLLLSVAPVSISRQLVARIYTESLRP MM
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=373, Percent_Identity=22.5201072386059, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI48994951, Length=340, Percent_Identity=30.2941176470588, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI87082107, Length=287, Percent_Identity=31.0104529616725, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1787493, Length=327, Percent_Identity=27.217125382263, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1789163, Length=307, Percent_Identity=28.6644951140065, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789386, Length=341, Percent_Identity=26.3929618768328, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537053, Length=381, Percent_Identity=23.3595800524934, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321181, Length=292, Percent_Identity=31.1643835616438, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI24657991, Length=374, Percent_Identity=25.4010695187166, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 42913; Mature: 42913
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDDCCDYNMVREVRVKGIAYLGVGAIDKIDPILGRLKSEGITAVLCVCGGHAYRASGAW CCCCCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCC DKAEAAALRHGIVLALYNRVTPSPTTDTVDDAAALGRAINAGAVLAIGGGSPLDCGKSAA CHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCE ILLANPGKSAEDLFCFRFTPQKALPLVAVNLTHGTGSEVNRFAVVTVSGRSHRSIVGHDC EEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC MYPRYAIDDPALMTGLSAEQSRYVSINAFCRVVEAATATAANPLAVTLARETVRLVHHWL CCCCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHC PVALDEPENLKARYGLCLAALQAGVAFDNSHLHLAHALEQPLGRLRNLPHGMRLAILLPA CCCCCCCCCHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIGACYAAKPDVLAHVLGPVAPGLQGMPEEADQAARAVERWIFSLGITQKLLDLGVQEFD HHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VEEFCNFVEQTPSLGLLLSVAPVSISRQLVARIYTESLRPMM HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWDDCCDYNMVREVRVKGIAYLGVGAIDKIDPILGRLKSEGITAVLCVCGGHAYRASGAW CCCCCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCC DKAEAAALRHGIVLALYNRVTPSPTTDTVDDAAALGRAINAGAVLAIGGGSPLDCGKSAA CHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCE ILLANPGKSAEDLFCFRFTPQKALPLVAVNLTHGTGSEVNRFAVVTVSGRSHRSIVGHDC EEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC MYPRYAIDDPALMTGLSAEQSRYVSINAFCRVVEAATATAANPLAVTLARETVRLVHHWL CCCCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHC PVALDEPENLKARYGLCLAALQAGVAFDNSHLHLAHALEQPLGRLRNLPHGMRLAILLPA CCCCCCCCCHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIGACYAAKPDVLAHVLGPVAPGLQGMPEEADQAARAVERWIFSLGITQKLLDLGVQEFD HHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VEEFCNFVEQTPSLGLLLSVAPVSISRQLVARIYTESLRPMM HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]