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The map label for this gene is 220905226

Identifier: 220905226

GI number: 220905226

Start: 2367931

End: 2368575

Strand: Reverse

Name: 220905226

Synonym: Ddes_1964

Alternate gene names: NA

Gene position: 2368575-2367931 (Counterclockwise)

Preceding gene: 220905227

Following gene: 220905225

Centisome position: 82.43

GC content: 63.41

Gene sequence:

>645_bases
ATGGATATGGATGTTCTGCGCCGCCGCCTGAGCAGCGAAGAGATAAACGCCTTGCCCCTGTGTCACTACGAGGGGCCGGT
GCATGTGGTACGCAGCGAGGCGGACTGGCAGGCTGCGCTGCCCCTGTTGCGTGAGGAAAGCATTCTGGGTTTTGATACCG
AAACACGTCCGTCCTTCCGCAAGGGCAGGCGCAATTCGCCCGCGCTCATCCAGCTGGCAACGGCCCGGGCTGTCTATCTT
ATCCAGTTGTCCTGGTTGCCCTTCGGGCCGCACCTGGCGGACCTGCTCGCCAATCCCGTGCAGGTCAAGGCGGGCGTGGG
CATTCGGGATGACATGCGCGACCTGGCAAAACTGCACGATTTTGAGCCTGCGGGGCTGGTGGATCTCGGCGGCGTTGCCC
GTGCGCACAAGCTGCCCAGCCAGGGGTTGCGCACACTGGCGGCCAATTTTTTTGGCTGGCGCGTTTCCAAGGGGTCCCAG
TGCTCAAACTGGAGCCTGCCCGAGCTTAGCGCCCGGCAGATCGCCTACGCCGCCACCGATGCCTGGATAGGCCGGCTTAT
CTTTATCCGTATGTGCGAGCTTGGCCTCATTCCTGCTGCCAGGCCTGCCAGTTGGCCTGCCGTGAGTTGCGGAGGCGGTG
CGTGA

Upstream 100 bases:

>100_bases
CGCCCATCTGGCGGAGGTAACAGGCCTGAGCAGCCCCGCTGAGGTGCTGGACAGGGTTTTTTCTCAATTTTGTATCGGCA
AGTAGTCTGGTAAGTAATTT

Downstream 100 bases:

>100_bases
GCGGTCTTCCGGCCCACCCGGCCTTTCCGGCCCTGGGGCCGCGCCTGACCTTTTTTACCGGCGGCACCGCCTTGCGTGCC
CTGAGCCGCGAACTGACCAG

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3 Exoribonuclease Family Protein; 3- 5' Exonuclease Domain Protein; Ribonuclease D; Exonuclease

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDMDVLRRRLSSEEINALPLCHYEGPVHVVRSEADWQAALPLLREESILGFDTETRPSFRKGRRNSPALIQLATARAVYL
IQLSWLPFGPHLADLLANPVQVKAGVGIRDDMRDLAKLHDFEPAGLVDLGGVARAHKLPSQGLRTLAANFFGWRVSKGSQ
CSNWSLPELSARQIAYAATDAWIGRLIFIRMCELGLIPAARPASWPAVSCGGGA

Sequences:

>Translated_214_residues
MDMDVLRRRLSSEEINALPLCHYEGPVHVVRSEADWQAALPLLREESILGFDTETRPSFRKGRRNSPALIQLATARAVYL
IQLSWLPFGPHLADLLANPVQVKAGVGIRDDMRDLAKLHDFEPAGLVDLGGVARAHKLPSQGLRTLAANFFGWRVSKGSQ
CSNWSLPELSARQIAYAATDAWIGRLIFIRMCELGLIPAARPASWPAVSCGGGA
>Mature_214_residues
MDMDVLRRRLSSEEINALPLCHYEGPVHVVRSEADWQAALPLLREESILGFDTETRPSFRKGRRNSPALIQLATARAVYL
IQLSWLPFGPHLADLLANPVQVKAGVGIRDDMRDLAKLHDFEPAGLVDLGGVARAHKLPSQGLRTLAANFFGWRVSKGSQ
CSNWSLPELSARQIAYAATDAWIGRLIFIRMCELGLIPAARPASWPAVSCGGGA

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=152, Percent_Identity=34.2105263157895, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23461; Mature: 23461

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMDVLRRRLSSEEINALPLCHYEGPVHVVRSEADWQAALPLLREESILGFDTETRPSFR
CCHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHH
KGRRNSPALIQLATARAVYLIQLSWLPFGPHLADLLANPVQVKAGVGIRDDMRDLAKLHD
CCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHC
FEPAGLVDLGGVARAHKLPSQGLRTLAANFFGWRVSKGSQCSNWSLPELSARQIAYAATD
CCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHH
AWIGRLIFIRMCELGLIPAARPASWPAVSCGGGA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDMDVLRRRLSSEEINALPLCHYEGPVHVVRSEADWQAALPLLREESILGFDTETRPSFR
CCHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHH
KGRRNSPALIQLATARAVYLIQLSWLPFGPHLADLLANPVQVKAGVGIRDDMRDLAKLHD
CCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHC
FEPAGLVDLGGVARAHKLPSQGLRTLAANFFGWRVSKGSQCSNWSLPELSARQIAYAATD
CCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHH
AWIGRLIFIRMCELGLIPAARPASWPAVSCGGGA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA